BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480426
Length=1433
Score E
Sequences producing significant alignments: (Bits) Value
AT2G15730.1 | Symbols: | P-loop containing nucleoside triphosp... 2167 0.0
AT4G34420.1 | Symbols: | P-loop containing nucleoside triphosp... 989 0.0
> AT2G15730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:6849555-6852143
FORWARD LENGTH=1539
Length=1539
Score = 2167 bits (1173), Expect = 0.0
Identities = 1362/1449 (94%), Gaps = 29/1449 (2%)
Strand=Plus/Plus
Query 1 TTTATAATTTGTATGGGCTGATCAGAGAAAAGCCACTTTGtttttttttttttAGCTGGA 60
||| |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||
Sbjct 104 TTTTTAATTTGTATGGGCTGATCAGAAAAAAGCCACTTTGTGTTTTCTTTTTTAGCTGGA 163
Query 61 CTGTGTCTGAA--A-TC--TG--AATC-ATTCAATGCCTTtc----t-tctctctctcta 107
| ||||||||| | || || || ||| | |||||| | ||||||||||||
Sbjct 164 CGGTGTCTGAATCATTCAATGCCTTTCTCTTCTCTACCTTTCTAAATCTCTCTCTCTCTA 223
Query 108 tctctcCCTCGAAGCAACAGCCATGGGCGACGAACACTCTCTCATCCCAAAGGATAGTTT 167
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 TCTCTCCATCGAAG---CAGCCATGGGCGACGAACACTCTCTCATCCCAAAGGATAGTTT 280
Query 168 TGTCTTCAAGCTTCCTAAAAAATCACCACTTGTGTTAAGAACGGTTGTTCTCTTGTTTGT 227
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 281 TGTCTTCAAGCTTCCTAAAAAATCACCACTTGTGTTGAGAACGGTTGTTCTCTTGTTTGT 340
Query 228 GATGGTTTGTACTGTTTATATTTGCTCTATTTGTTTGAAGCAAATTGGTGTTGTCCCTAG 287
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 341 GATGGTTTGTACTGTTTATATTTGCTCTATTTGTTTAAAGCAAATTGGTGTTGTCCCTAG 400
Query 288 TGCTGGATTCTTGAATGTTGAAGTGTTTGAGAGACAGTGTCCTGAGCCTAACATTGAACC 347
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 401 TGCTGGATTCTTGAATGTTGAAGTGTTTGAGAGACCTTGTCCTGAGCCTAACATTCAACC 460
Query 348 TTGGGACATACCTTATGTCCATTATCCTAAACCTAAGACTTACAGCAGGGAGGAATGTTC 407
||||||||| |||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct 461 TTGGGACATTCCTTATGTTCACTATCCTAAACCTAAGACCTATAGCAGGGAGGAATGTTC 520
Query 408 GTGCAATCCCGTTAGGTATTTTGCTATTCTCTCGATGCAGAGATCTGGTAGCGGCTGGTT 467
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 521 GTGCAATCCCGTTAGGTATTTTGCTATTCTCTCGATGCAGAGATCTGGTAGCGGTTGGTT 580
Query 468 TGAGACTTTACTTAACAATCATACTAACATAAGCTCGAACGGGGAGATCTTTTCGGTTAA 527
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 581 TGAGACTTTACTTAACAATCATACTAACATTAGCTCGAACGGGGAGATCTTTTCGGTTAA 640
Query 528 AGATAGGAGGGCTAATGTGTCGACTATTTTTGAGACCTTGGACAAATTGTATAACTTAGA 587
|||||||||||||||||||||||| ||||||||||| ||||||||| | ||||| |||||
Sbjct 641 AGATAGGAGGGCTAATGTGTCGACCATTTTTGAGACGTTGGACAAAGTATATAATTTAGA 700
Query 588 TTGGTTGAGTAGTGCTTCTAAGAACGAGTGCACCTCTGCCGTTGGATTGAAGTGGATGCT 647
|||||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct 701 TTGGTTGAGTAGTGCTTCTAAGAACGAGTGTACATCTGCTGTTGGTTTGAAATGGATGCT 760
Query 648 TAATCAGGGTCTAATGAAACACCATGAAGAGATAGTAGAATACTTCAAAACCCGAGGCGT 707
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 761 TAATCAGGGTCTAATGAAAAACCATGAAGAGATAGTAGAATACTTCAAAACCCGAGGCGT 820
Query 708 GTCTGCTATTTTCCTCTTTAGAAGAAACCTCTTGCGCCGGATGATTTCAGTTCTTGCAAA 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 GTCTGCTATTTTCCTCTTTAGAAGAAACCTCTTGCGCCGGATGATTTCAGTTCTTGCAAA 880
Query 768 CTCTTACGATAGAGATGCTAAGCCATTAAACGGTACTCACAAGTCCCACGTCCATTCCCC 827
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 881 CTCTTACGATAGAGATGCTAAGCCATTAAACGGAACTCACAAGTCCCATGTCCATTCCCC 940
Query 828 TAAAGAGGCTGAGATATTGGCGCGCTACAAACCATTGATCAACACGAGCCTTTTGATACC 887
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 941 TAAAGAGGCTGAGATATTGGCGCGCTACAAACCATTGATCAACACGAGTCTTTTGATACC 1000
Query 888 TGATCTGAAGCAGGTTCAAGAGATGACTTCAAAGGCACTTGCTTACTTTAATACCACCCG 947
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 1001 TGATCTGAAGCAGGTTCAAGAGATGACTTCAAAAGCACTTGCTTACTTTAACACCACGCG 1060
Query 948 GCATATTTTCCTCTACTACGAAGATGTTGTCAAGAACCGCACTAAACTAGATGATGTGCA 1007
|||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 1061 GCATATCTTCCTCTACTACGAAGATGTTGTCAAGAACCGCACCAAACTAGACGATGTACA 1120
Query 1008 AGAGTTTCTAAAGGTCCCGAAACTCGATTTAAAGAGTAGGCAAGTGAAGATTCATCATGG 1067
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1121 AGAGTTTCTGAAGGTCCCGAAACTAGATTTAAAGAGTAGGCAAGTGAAGATTCATCATGG 1180
Query 1068 TCCATTGTCAAAACACGTACAAAATTGGGAAGAGGTGCAAACA-ACACTGAAAGGGACCG 1126
||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1181 TCCGTTGTCACAACACGTACAAAATTGGGAAGAGGTGCAAA-AGACACTGAAAGGGACCG 1239
Query 1127 GTTTCGAAAACTTTCTACTTGAAGATTACCGCAGGTGAATTTAACTCTAGGAGAGAGTGA 1186
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1240 GTTTCGAAAACTTTCTACTTGAAGATTACCGCAGGTGAAATTAACACTAGGAGAGAGTGA 1299
Query 1187 TGTACATAAACCTCTCTCGCAGAAAGGTCAGACCAACTTGTAGGAAAGTTTTGGTAGTGC 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 TGTACATAAACCTCTCTCGCAGAAAGGTCAGACCAACTTGTAGGAAAGTTTTGGTAGTGC 1359
Query 1247 CACGAACTGgttttgcaagtctttt-atcttttagttttctctgtttttttccaagtttt 1305
||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct 1360 CACGAACAGGTTTTGCAAGTCTTTTTATCTTTTAGTTTTCTCTGTTTTT--C----TTTC 1413
Query 1306 AATCAAGTTGTTAGCTCTTAATTCGATTCATTCTTTACCAGGGAACTAAGAGTTCTATTG 1365
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1414 ---CAAGTTGTTAGCTCTTAATTCGATTCATTCTTTATCAAGGAACTAAGAGTTCTATTG 1470
Query 1366 TAATCAGAAACAC-ATCTGGTTCATCCTCTTATTTACTTCTAATGATTAGAACAAAGAAC 1424
||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1471 TAATCAGAAACACGATCCGGTTCATCCTCTTATTTGCTTCTAATGATTAGAACAAAGAAC 1530
Query 1425 AAACATTTG 1433
||| |||||
Sbjct 1531 AAAGATTTG 1539
> AT4G34420.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16458068-16460652
FORWARD LENGTH=1517
Length=1517
Score = 989 bits (535), Expect = 0.0
Identities = 898/1070 (84%), Gaps = 38/1070 (4%)
Strand=Plus/Plus
Query 91 TTtcttctctctctctatctctcCCTCGA-AGCAACAGCCATGGGCGACGAACAC-TCTC 148
||||| ||||||| |||||| ||| | || |||||||||| ||| | || | |||
Sbjct 325 TTTCTGATCTCTCTGAATCTCT--CTCTATCGCGACAGCCATGGCCGAAG-ACCCTTCTT 381
Query 149 TCATCCCAAAGGATAGTTTTGTCTTCAAGCTTCCTAAAAAATCACCACTTGTGTTAAGAA 208
|| |||| |||||| |||||||||| |||||||||||||| ||| ||||||| || ||||
Sbjct 382 TCCTCCCCAAGGATGGTTTTGTCTTGAAGCTTCCTAAAAAGTCATCACTTGTATTGAGAA 441
Query 209 CGGTTGTTCTCTTGTTTGTGATGGTTTGTACTGTTTATATTTGCTCTATTTGT-TTGAAG 267
||| |||||| | ||||| ||||| ||| |||| || |||||||| |||||| || |||
Sbjct 442 TGGTCGTTCTCCTCTTTGTAATGGTCTGTGCTGTGTACATTTGCTCCATTTGTCTT-AAG 500
Query 268 CAAATTGGTGTT-GTCCCTAGTGCTGGATTCTTGAATGTTGAAGTGTTTGAGAGACAGTG 326
||||| || ||| |||| | | ||| |||||||| ||||||||||||||||| | ||
Sbjct 501 CAAATAGGAGTTAGTCCAAACT-ATGGTTTCTTGAACGTTGAAGTGTTTGAGAGGCCTTG 559
Query 327 TCCTGAGCCTAACATTGAACCTTGGGACATACCTTATGTCCATTATCCTAAACCTAAGAC 386
||||||||||||||| ||||| |||||||| |||| ||| ||||| |||||||| |||||
Sbjct 560 TCCTGAGCCTAACATCGAACCGTGGGACATTCCTTTTGTGCATTACCCTAAACCAAAGAC 619
Query 387 TTACAGCAGGGAGGAATGTTCGTGCAATCCC-GTTAGGTATTTTGCTATTCTCTCGATGC 445
|| | |||||| |||||||| ||| | ||| |||||||| ||||| ||||| |||||||
Sbjct 620 ATATAACAGGGATGAATGTTCTTGCCA-CCCGGTTAGGTACTTTGCGATTCTATCGATGC 678
Query 446 AGAGATCTGGTAGCGGCTGGTTTGAGACTTTACTT-AACAATCATACTAACATAAGCTCG 504
||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct 679 AGAGATCTGGTAGTGGCTGGTTTGAGACTTT-GTTAAACAATCATACTAACATAAGCTCC 737
Query 505 AACGGGGAGATCTTTTCGGTTAAAGATAGGAGGGCTAATGTGTCGACTATTTTTGAGAC- 563
||||||||||| ||||| || |||||||||||||||||||| || || ||||| |||||
Sbjct 738 AACGGGGAGATATTTTCTGTGAAAGATAGGAGGGCTAATGTTTCCACCATTTTCGAGACT 797
Query 564 CTTGGACAAATTGTATAACT-TAGATTGGTTGAGTAGTGCTTCTAAGAACGAGTGCACCT 622
||| |||||| | ||||| | |||| |||||||||||||| ||||||||||||||||| |
Sbjct 798 CTT-GACAAAGTCTATAA-TCTAGACTGGTTGAGTAGTGCCTCTAAGAACGAGTGCACTT 855
Query 623 CTGCCGTTGGATTGAAGTGGATGCTTAATCAGGGTCTAATGAAACACCATGAAGAGATAG 682
| || ||||| || |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 856 CCGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTCTAATGAAACATCATGAAGAAATAG 915
Query 683 TAGAATACTTCAAAACCCGAGGCGTGTCTGCTATTTTCCTCTTTAGAAGAAACCTCTTGC 742
||||||||||||||||||||||||| ||||| |||||||| || |||| |||||| ||||
Sbjct 916 TAGAATACTTCAAAACCCGAGGCGTCTCTGCGATTTTCCTATTCAGAAAAAACCTATTGC 975
Query 743 GCCGGATGATTTCAGTTCTTGCAAACTCTTACGATAGAGATGCTAAGCCATTAAACGGTA 802
|||| ||||| ||||| || ||||||||||| || ||||||||||||| | ||||||| |
Sbjct 976 GCCGCATGATATCAGTACTCGCAAACTCTTATGACAGAGATGCTAAGCTACTAAACGGGA 1035
Query 803 CTCACAAGTCCCACGTCCATTCC-CCTAAAGAGGCTGAGATATTGGC-GCGCTACAAACC 860
|||||||||| ||| |||||| || ||||| ||||||||||| || | | ||||||||
Sbjct 1036 CTCACAAGTCTCACACCCATTCGGCC-AAAGAAGCTGAGATATTAGCAG-GTTACAAACC 1093
Query 861 ATTGATCAACACGAGC-CTTTTGATACCTGATCTGA-AGCAGGTTCAAGAGATGACTTC- 917
| |||||||||| | | ||||| ||| ||| |||| | ||| ||||||| |||||||
Sbjct 1094 AATGATCAACACAA-CACTTTTAATAAATGAGCTGAGA-CAGATTCAAGAAATGACTTTG 1151
Query 918 AAAGGCACTTG-CTTACTTTAATACCACCCGGCATATT-TTCCTCTACTACGAAGATGTT 975
|||| | ||| ||||||| |||||||| || ||||| || |||||||||||||||||
Sbjct 1152 AAAG-CT-TTGACTTACTTCAATACCACTCGACATATCCTTG-TCTACTACGAAGATGTT 1208
Query 976 GTCAAGAACCGCACTAAACTAGATGATGTGCAAGAGTTTCTAAAGGTCCCGAAAC-TCGA 1034
|||||||||| ||| | |||||| ||||| || |||||||||||||| || |||| | |
Sbjct 1209 GTCAAGAACCTCACGAGACTAGACGATGTACAGGAGTTTCTAAAGGTACCAAAACGTA-A 1267
Query 1035 TTTAAAGAGTAGGCAAGTGAAGATTCATC-ATGGTCCATTGTCAAAACACGTACAAAATT 1093
||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||
Sbjct 1268 GTTAAAGAGTAGGCAAGTGAAGATTCATGGA-GGTTCATTGTCAAAACATGTACAGAATT 1326
Query 1094 GGGAAGAGGTGCAA-ACAACACTGAAAGGGACCGGTTTCGAAAACTTTCT 1142
|||||||||| || || ||||| ||||| ||| ||||||||| |||||
Sbjct 1327 GGGAAGAGGT-CATGACCACACTTAAAGGAACCAATTTCGAAAA-TTTCT 1374
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70632166815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5