BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480427 Length=1175 Score E Sequences producing significant alignments: (Bits) Value AT2G15760.1 | Symbols: | Protein of unknown function (DUF1645)... 1659 0.0 > AT2G15760.1 | Symbols: | Protein of unknown function (DUF1645) | chr2:6865610-6866877 REVERSE LENGTH=1268 Length=1268 Score = 1659 bits (898), Expect = 0.0 Identities = 1089/1179 (92%), Gaps = 22/1179 (2%) Strand=Plus/Plus Query 1 CTCTCTCTTCTT-TAATCTCTCTAAAGTCAAGCTTTTCTTCTGAAAGGGAACACCTTCCA 59 |||||||| ||| | | ||||||||||||||||||||| ||| |||||||||||||| || Sbjct 14 CTCTCTCTCCTTGT-ACCTCTCTAAAGTCAAGCTTTTCGTCTAAAAGGGAACACCTTACA 72 Query 60 AGAACCAAGAAAGGCAAAATAAGAACAGAGCATCCAAAGAACAACCCATTAATGGAGATA 119 | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 73 ACAACCAAGAAAGGCAAAAGAAGAACAGAGCATCCAAAGAACAAACCATTAATGGAGATA 132 Query 120 GAAGTGGC---AGTAGCATCAGCAGAACTCAATTTCGACAGCACAACTTCTTCTCCTTAC 176 |||||||| || |||| |||||||||||||||| |||||||||||||| ||||||||| Sbjct 133 GAAGTGGCAGAAGCAGCAGCAGCAGAACTCAATTTTGACAGCACAACTTCGTCTCCTTAC 192 Query 177 ATAACAGCTCCTTCAAGCCCAACTCGATTTGGTAACAACAATGTTTTCTTTTTCAGTGCA 236 |||||||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 193 ATAACAGCTCCTTCGAGCCCAACTCGATTTGG---CAACAA------CTTTTTCAGTGCA 243 Query 237 CCCACAAGCCCTTCTCCTTCCACTTCCTCTAACATACCTTTTGATTGGGATGACCAACCA 296 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 CCAACAAGCCCTTCTCCTTCCACTTCCTCTAACATACCTTTTGATTGGGATGACCAACCA 303 Query 297 AGAACTCCCAAAAAGAGATCAGCCAGCGATTTCGAAGACGATTTTGAGTTCAATTTCAGT 356 ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 304 AGAACTCCCAAGAAGAGATCAGCCATCGGTTTCGAAGACGATTTTGAGTTCAATTTCAGT 363 Query 357 GGTCAATTGGAGAAAACTTCTTTCTCTGCCGCCGATGAGCTCTTTGATGGAGGAAAGATT 416 ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 364 GGTCAGTTGGAGAAAACTTCTTTCTCTGCAGCTGATGAGCTCTTTGATGGAGGAAAGATT 423 Query 417 CGACCTTTAGGGCCACCACTCACTCCTACTGTTTCTTCTCCTAGATCTAGGGATCTTGAG 476 || |||||| || |||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 424 CGTCCTTTAAGGACACCTCTCACTCCTACTGTTTCTTCTCCTAGATCTAGGGGTCTTGAG 483 Query 477 ATAGAAGTTTCCGATGATCAAAAAGATCGAGGAAGAGATCGGTCTCCGGGATCTTCTTCT 536 ||||||| ||| |||||||| ||||||||||||||||| ||||| || |||||||||||| Sbjct 484 ATAGAAGATTCGGATGATCAGAAAGATCGAGGAAGAGACCGGTCACCAGGATCTTCTTCT 543 Query 537 TCGCGTTATGATCGTAAAGGAAGCCGTTCTATGTCTCCGTTGAGAGTTTCAGACATTATG 596 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 544 TCGCGTTATGATCGTAAAGGAAGCCGTTCTATGTCTCCGTTAAGGGTTTCAGACATTATG 603 Query 597 GTTGGTGAAGAAGAAGAAGTACAATCAACAAAATTGGTTGCTTCCAACACAAGCAATCAA 656 |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 604 GTTGATGAAGAAGAAGAAGTACAATCAACAAAAATGGTTGCTTCCAACACAAGTAATCAA 663 Query 657 AAATCCTCTGTTTTCTTGTCTGCTATTCTGTTCCCTGGTCGAGCATATAAGAAGTGGAAA 716 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 664 AAATCCTCTGTTTTCTTGTCAGCAATTCTGTTCCCTGGTCGTGCATATAAGAAGTGGAAA 723 Query 717 CTCAAAGATCTATTGCTGTTCAGGAGCGCATCGGATGGAAGACCGGTTCCGACCAAAGAG 776 ||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct 724 CTCAAAGATCTGTTGCTATTCAGGAGTGCATCGGATGGAAGACCGATTCCGACCAAAGAG 783 Query 777 TCATTGAATAGATACGATATACTTACAAAGAAAGAGGCCGAGGATGTGAAAAATTCGAGT 836 || || ||||| ||||||||||||||||||||||| |||||||| |||| |||||||||| Sbjct 784 TCTTTAAATAGGTACGATATACTTACAAAGAAAGATGCCGAGGAAGTGAGAAATTCGAGT 843 Query 837 ATCAGGTCGAGAGAGAGTTGTGAGTCGTCGGTGTCTAGGTCAAGGAGGAGGAACGGAGCC 896 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 844 ATCAGATCGAGAGAGAGTTGTGAATCTTCGGTGTCTAGGTCAAGGAGGAGGAACGGAGCG 903 Query 897 GTGGTTTCGGCTCACGAGATGCATTACACTGAGAACAGAGCCGTGTCGGAGGAATTGAAG 956 ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||| Sbjct 904 GTGGTTTCGGCTCACGAGATGCATTACACTGAGAACAGAGCAGTATCGGAAGAATTGAAG 963 Query 957 AGGAAGACATTCTTGCCGTACAAGCAAGGCTGGTTAGGCTGCTTAGGGTTTAATCCTGCG 1016 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 964 AGGAAGACATTCTTGCCGTACAAGCAAGGCTGGTTAGGCTGCTTAGGGTTTAACCCTGCG 1023 Query 1017 GTCAATGAAATTGCAAGAGTTGGGTCATTGTCACGTGCTTCCTCTTGATCCCTCTTGTAC 1076 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | || Sbjct 1024 GTCAATGAAATTGCTAGAGTTGGGTCATTGTCACGTGCTTCCTCTTGATCCCTCTCGCAC 1083 Query 1077 tttttttttGAACAAAGTTCTTATATATTATTTATTCGCtttttttGGTGGCTTTAAATG 1136 |||||||||| | || | || || |||| | |||| ||||||| ||||| |||||||| Sbjct 1084 TTTTTTTTTGTCCTAA-T-CT-AT-TATT-T--ATTCACTTTTTT-GGTGGATTTAAATG 1135 Query 1137 TGGTGGTGAGGTTCCATCAAATTGATGGAAAAAGATGAT 1175 ||||| |||||||||||||||||||||| |||| ||||| Sbjct 1136 TGGTGTTGAGGTTCCATCAAATTGATGGGAAAATATGAT 1174 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57680426205 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5