BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480428 Length=951 Score E Sequences producing significant alignments: (Bits) Value AT2G15780.1 | Symbols: | Cupredoxin superfamily protein | chr2... 1310 0.0 > AT2G15780.1 | Symbols: | Cupredoxin superfamily protein | chr2:6873545-6874741 REVERSE LENGTH=935 Length=935 Score = 1310 bits (709), Expect = 0.0 Identities = 881/959 (92%), Gaps = 32/959 (3%) Strand=Plus/Plus Query 1 AATCACTTATCAAATAGCTAACAATTCACAAGAAGAAGCAATGGCACACTCTCGTTTTTT 60 |||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| Sbjct 1 AATCTCTTATCAAATAACTAACAATTCACAAGAAGAAACAATGGTACACTCTCGTTTTTT 60 Query 61 GAACGtttttttAGTCCTAGTGACCATTGCTTCCATATTCTCCACATTTGCTGAGGCCAA 120 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 61 AAACGTTGTTTTAGTCCTAGTGACCATTGCTTCCATATTCTCCACATTTGCCGAGGCCAA 120 Query 121 TAGGGGCTTTGGGTGGGGTTGGGGTGGGCACTCCAACAATTCAAGTGGTTCAGGTTCAAA 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 121 TAGGGGCTTTGGGTGGGGTTGGGGTGGACACTCCAACAATTCAAGTGGTTCAGGTTCAAA 180 Query 181 CTCAAGGTCCGGAtggggttggggttggggttggggtCATGGCTCCAACTATTCAAGTGG 240 ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 181 CTCGAGGTCCGGA------TGGGGTTGGGGTTGGGGTCAAGGCTCCAACTATTCAAGTGG 234 Query 241 TTCAGGTTCAACCCCAGGGTCAGGATGGGGTTGGGGCTCTAGCCGAAACGGCTCAGGCTG 300 ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 235 TTCAGCTTCAACCCCAGGGTCAGGATGGGGTTTCGGCTCTAGTCGAAACGGCTCAGGCTG 294 Query 301 GGGTTGGGGTTGGGGCGGGGTTCCCAACAATACACACAACTC-GGGATCTGGTGGCTCGG 359 |||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||| Sbjct 295 GGGTTGGGGTTGGGGCGGGGTTCCCAACAATACACACAGCTCAGGG-TCTGGCGGCTC-- 351 Query 360 GTTGGGGTTGGGGCATGGGTCCTAACAACAATTACAGCTCAGGATCTGGAGGCTCGGGTT 419 ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct 352 ----GGGTTGGGGCATGGGGCCTAACAACAATTACAGCTCGGGATCTGGCGGCTCGGGTT 407 Query 420 CGGGCTGGGGATATGGAGGTCATTCAAAAAACTATAATGCCACCTACAATGGACCTAGAA 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 408 CGGGCTGGGGATATGGAGGTCATTCAAAAAACTATAATGCCACCTACAATGGACCTAGAA 467 Query 480 AGATTATAGTCGGTGGAGACAAAGAGTGGAATTATGG-TGTCAACTATGCCGAGTGGGCG 538 |||| ||||||||||||||||||||||||| |||||| | |||| || || || ||||| Sbjct 468 AGATCATAGTCGGTGGAGACAAAGAGTGGACTTATGGAT-TCAATTACGCTGACTGGGCT 526 Query 539 TCTAAGACTGCTCCATTCTTTCTCAATGACATACTTGTTTTCAAATACAACCCACCAGCC 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 TCTAAGACTGCTCCATTCTTTCTCAATGACATACTTGTTTTCAAATACAACCCACCAGCC 586 Query 599 CCGTTCACGCACAGCGTCTACTTGCTTCCAAACCCATCGAGCTATGAAAAGTGTGACGTG 658 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 587 CCGTTCACGCACAGCGTTTACTTGCTTCCGAACCCATCGAGTTATGAAAAGTGTGACGTG 646 Query 659 AAGAAAGGCAAAATGATTGCATCCCCGAAGCAAGGTGCGGGAAAAGGCTTTGAGTTTGTT 718 |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct 647 AAGAAAGGCAAAATGATTGCGTCTCCGAAGCAAGGTGCTGGAAAAGGCTTTGAGTTTGTT 706 Query 719 CTAAAACAGATGA-GACCTTACTACATTTCGTGCGGGGAGCATGATGGTGCTCACTGCAA 777 ||||||||||||| | ||||||||||||||||| || |||||||| |||||||| |||| Sbjct 707 CTAAAACAGATGAAG-CCTTACTACATTTCGTGTGGCGAGCATGACGGTGCTCATTGCAG 765 Query 778 CAACGGTACCATGAAGTTCACCGTCATGCCCATGCTACCCCGTTGGTAATGATG-TGGTA 836 ||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 766 CAATGGTACCATGAAGTTCACCGTCATGCCCATGCTACCCCGTTGGTAATT-TGGTGGTA 824 Query 837 TTAAATCCAATTTCAACGTTAAAGTATCAAACATT-GGATTTTCATTTCGTTATTGTGTC 895 ||||||||||| | | ||||||||||||||| || |||| ||| ||| ||||||| Sbjct 825 TTAAATCCAATG-C----T-AAAGTATCAAACATTAGGTTTTTGTTTT-GTTTTTGTGTC 877 Query 896 GTCAATAAATGAGACTACCATTATTTATGTGTCGT-AT-C-ATATTCACATTTTGTTGG 951 |||||||||||||| |||||||||||| ||| ||| || | |||||||||||||||||| Sbjct 878 GTCAATAAATGAGATTACCATTATTTACGTG-CGTTATACCATATTCACATTTTGTTGG 935 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46516820122 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5