BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480532
Length=4416
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19390.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 6863 0.0
AT4G29790.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 2658 0.0
> AT2G19390.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G29790.1);
Has 203 Blast hits to 188 proteins in 60 species: Archae -
0; Bacteria - 11; Metazoa - 24; Fungi - 34; Plants - 93; Viruses
- 0; Other Eukaryotes - 41 (source: NCBI BLink). | chr2:8389800-8397862
REVERSE LENGTH=4414
Length=4414
Score = 6863 bits (3716), Expect = 0.0
Identities = 4213/4446 (95%), Gaps = 62/4446 (1%)
Strand=Plus/Plus
Query 1 AGTCCTAGTTTCATCGCCGATCAAAAACTAGCAACGAACCAATGCGCCTTCGATCCCGTC 60
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1 AGTACTAGTTTCATCGCCGATCAAAAACTAGCAACGAACCAATGCACCTTCGATCCCGTC 60
Query 61 ATCTCATGGCAACGTTGCTTGATTTCGATTTCGAG---C-t-tttttt-tttt-ttCACG 113
||||||||| |||||||||||||||||||||||| | | |||||| |||| ||||||
Sbjct 61 CTCTCATGGCCACGTTGCTTGATTTCGATTTCGAGCTTCTTATTTTTTATTTTCTTCACG 120
Query 114 -AACTCGCTGAAACGATCTAATCCTCAAAAGCTTTGATTTTTGGTATTGGGTTTTGTTG- 171
|||||| ||||||||||||||| |||| | |||||||||||||| ||||| |||||||
Sbjct 121 AAACTCGTTGAAACGATCTAATCTTCAACATCTTTGATTTTTGGTGTTGGGGTTTGTTGT 180
Query 172 TATCTGCGGAAATTTTTGTTTCCTTTGCCGCGGTTTGTGATTCAGAGGGTTTAATTATAG 231
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 181 TATCTGCGG-AATTTTTGTTTCCTTTGCCGCGGTTTTTGATTCAGAGGGTTTAATTATAG 239
Query 232 CTGTCTAATTGTGTCTGTCCGGTGCTCAACGAACGAACTAAGTGGAAGTGAATATTGGAG 291
|||||||| | || ||||||||| ||||| | |||||||||||||||||| ||||||
Sbjct 240 CTGTCTAA-T-TG--TGTCCGGTGTTCAAC--A--AACTAAGTGGAAGTGAATTTTGGAG 291
Query 292 GAATAT-TTATCACCTGGATTTTC-T-GA-TAGCAGGTGCATCTTAAATCAATTATTTGA 347
|| | | ||| ||| | | | | | || | | |||||| |||||||||||||||||
Sbjct 292 GACTTTCTTAACACAT--A-TCACTTGGATTCTC-TGTGCATTTTAAATCAATTATTTGA 347
Query 348 GACTGAGAAATCAGCATTTATGTGCTACAGCTTGTCATGCTCCAGTGTGTGTTTAGTGTT 407
| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 348 GTCTGAGAAATCAGCATTTATGTGCTACAGCTTGTCATGCTCCAGTGTGTATTCAGTGTT 407
Query 408 TATTATAAAACATAAGACTTTCGTGAGCTGAGGGAATGTCAGCACCTGGGAAGTTTGATT 467
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 408 TATTATAAAATATAAGACTTTCGAGAGCTGAGGGAATGTCAGCACCTGGGAAGTTTGATT 467
Query 468 ATTCTTCTGGTGGGCTAGATAGGCCTCTCTACAGATCTAACTTTGCCGCACAGATGGAAA 527
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 468 ATTCTTCTGGTGGGCTAGATAGGCCTCTATACAGATCTAACTTTGCCGCACAGATGGAAA 527
Query 528 GATCGAGTAGCTTTCGCGAGTCCATCGAACATTCTGTCCCATCTCATCCAATCATGTTGA 587
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 528 GATCGAGTAGCTTTCGCGAGTCCATGGAACATCCTGTCCCATCTCATCCAATCATGTTGA 587
Query 588 GGACCACTTCACCAATAGCACAAACCGATGTAACAAATTTCTTTCAGTGTTTGCGTTTTG 647
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 588 GGACCACTTCACCAATAGCACAAACTGATGTAACAAATTTCTTTCAGTGTTTGCGTTTTG 647
Query 648 ATCCTAAGGTGGTTGCCGCGGATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGACATG 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 648 ATCCTAAGGTGGTTGCCGCGGATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGGCATG 707
Query 708 TTAGTATTGCTCTTGGAATACAAGGAGATGAGTCTCCTAGTGGATCTTTGAAAGGAAAGT 767
| ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||
Sbjct 708 TGAGTATTGCTCTTGGAATACTAGGCGATGAGTCTCCTAGTGGATCTTTAAAAGGGAAGT 767
Query 768 TTATTCCATCGCCTATACCAGAAGAGATCAAAAGATTTAAGGCTGGTCTGCGCGAAAACA 827
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 768 TTATTCCATCTCCTATTCCAGAAGAGATCAAAAGATTTAAGGCTGGTCTGCGCGAAAACA 827
Query 828 ATGTGAAGGCCAGGGAGCGCGTAAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGT 887
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 828 ATGTGAAGGCCAGGGAGCGTGTAAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGT 887
Query 888 TTTTCCCAAGTGTACCTACAAAGAAAAGGTCTCGACCTGAAGGGTTTTCTGGTGA----T 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 888 TTTTCCCAAGTGTACCTACAAAGAAAAGGTCTCGACCTGAAGGGTTTTCTGGTGACCGCT 947
Query 944 C----G---G-TTGGTATCAGGACCAGGCCTTGGTAAAATGGGAATTCAGAGTCAGACCC 995
| | | |||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 948 CTGGTGATCGCTTGGTATCAGGACCAGGCCTAGGTAAAATGGGAATTCAGGGTCAGACCC 1007
Query 996 TGGCTGGTGGTTTTGAGCTTGACCAGCAAAAGTTTGATGAACGACCTAAAAGTGGTGTTC 1055
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1008 TGGCTGGTGGTTTTGAGCTTGACCAGCAAAAGTTGGATGAACGACCTAAAAGTGGTGTTC 1067
Query 1056 CAAATAAGAGAACACGTACTTCTATGATGGATGTTCGAAGCAATTCTATTGTTCGACAGT 1115
|||||||| ||||||||||||| |||||||||||||||| ||| | ||||||||||||||
Sbjct 1068 CAAATAAGCGAACACGTACTTCCATGATGGATGTTCGAAACAACTGTATTGTTCGACAGT 1127
Query 1116 CGGCGGCTGTAGACAGAGATAAAGAAATAATGCGGGTAGCAAATCATAATGCAGTTCAGG 1175
| ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1128 CAGCGGCTGTAGACAAAGATAAAGAAATAATGCGGGTGGGAAATCATAATGCAGTTCAGG 1187
Query 1176 GTGAAGATCGAACTTCAATTGGTATTGATGGTTGGGAAACGTCAAAAATGAAGAAAAAAC 1235
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 GTGAAGATCGAACTTCTACTGGTATTGATGGTTGGGAAACGTCAAAAATGAAGAAAAAAC 1247
Query 1236 GCTCCTCTATTAATGCGGACTGCCATCCTAACTTGGCTTCAAATAAAGTGGTTGATGGTT 1295
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1248 GCTCCTCTATTAATGCGGACTGTCATCCTAACTTGGCTTCAAATAAAGTGGTTGATGGTT 1307
Query 1296 ACCGAGACTTGAAGCAGGGCATACAACAGAAATCAACAGGCGACTCCCGGTCGAGATTGA 1355
|||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| |||
Sbjct 1308 ACCGAGACTTGAAGCAGGGCATACAACAGAAACCAACAGGCGATTCCCGGTCAAGAGTGA 1367
Query 1356 ATGGTGACTCAAACATGTTAAGGCAATCGACTAGTAATGGAGCTACTGGGTATGGAAGAT 1415
||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||
Sbjct 1368 ATGGTGACTCAAACATGTTCAGGCAATCGGCTGGTAATGGAGCTACTGGGTATGGAAGAT 1427
Query 1416 CTGATAACATCTCCCACCAGACGAGCCTGGCTGGGCATTCTCCACTGCCGAGGGTTGATT 1475
|||||| | |||| || ||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1428 CTGATAGCCTCTCTCATCAGACGAGCTTGGCTGGGCATTCTCCACTGGCGAGGGTTGATT 1487
Query 1476 CTGATCATAATTCTTTGTACAATGAGAAGAGAGAACGCTCGATTGGCTCAGATAAGGAAA 1535
|||| ||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct 1488 CTGACCATAACTCTTTGTACAGTGAGAAGAGAGAACGCTCCATTGTCTCAGATAAGGAAA 1547
Query 1536 GGGTGAATCTCAGGGGAGTCAACAAGTCAAATATTCATGATGAATTCAATTCTTCAAGTC 1595
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1548 GGGTGAATCTCAGGGGCGTCAACAAGTCAAATATTCATGATGAATTCAATTCTTCAAGTC 1607
Query 1596 TGGTTTCAAACACAAAAACAAATGCTTCAGTTCGTGGACCTAGATCAGGATCGGGGCTAC 1655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1608 TGGTTTCAAACACAAAAACAAATGCTTCAGTTCGTGGACCTAGATCAGGATCGGGGTTAC 1667
Query 1656 CACCAAAACTGTCTCCAGGACTCCATAACACTCCGTCCCCAATTGAATGGGATATCTCTG 1715
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1668 CACCAAAACTGTCTCCAGGACTCCATAACACTCCGTCCCCGATTGAATGGGATATCTCTG 1727
Query 1716 GCTGTACGAATAAGCCTCCAACATTGTCAGGAGTTACACATCGCAAGCGTATGACATCAA 1775
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1728 GCTGTACGAATAAGCCTCCAACATTGTCAGGAGTTACACAACGCAAGCGTATGACATCAA 1787
Query 1776 ATCGGTCTTCATCACCACCTGTCACTCAGTGGGCCAGTCAAAGACCACAAAAGATATCCC 1835
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1788 ATCGTTCTTCATCACCACCTGTCACTCAGTGGGCCAGTCAAAGACCACAAAAGATATCCC 1847
Query 1836 GGATAGCAAGGAGGACAACTTTAGTGCCCATTGTTTCTAGTAACGACGAAGTTCCCTACT 1895
|||||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||||
Sbjct 1848 GGATAGCAAGAAGGACAAATTTAGTGCCCATTGTTTCTAGTCAGGACGAAGTTCCCTACT 1907
Query 1896 CTGATAATATATCAGATGCTGGTTGTAGTGAAACTGGGTTTGGATTTCATAAACGTTCGC 1955
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1908 CTGATAATATATCAGATGTTGGTTGTAGTGAAACTGGGTTTGGATTTCATAAACGTTCAC 1967
Query 1956 CAGCTGCTTCTCCTCAATTGAAGCTAAAAGGTGAAAGCAGCTTCTCCACTGCAGCCTTAT 2015
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1968 CAGCTGCTTCTCCTCAATTGAAACTAAAAGGTGAAAGCAGCTTCTCCACTGCAGCCTTAT 2027
Query 2016 CAGAAAGTGAAGAATCTGGCCCCCCTGAGATCAAATCTAAAGACAAGGGTAAACAGTCTG 2075
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 2028 CAGAAAGTGAAGAATCTGGCCACCCTGAGATCAAATCTAAAGACAAAGGTAAACAGTCTG 2087
Query 2076 ATGAGGTTGATGGGAAAGCTGCACAAAATATTCCTAGAGTGTCCATCCCTGCTTTACAAT 2135
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2088 ATGAGGTTGATGGGAAAGCTGCACAGAATATTCCTAGAGTGTCCATCCCTGCTTTACAAT 2147
Query 2136 CAAGAAAAAGTAACAAGCCTGCAGCTGGTGAAGAGATTGGGGATGGTGTGAGAAGGCAAG 2195
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2148 CAAGAAAAAGTAATAAGCCTGCAGCTGGTGAAGAGATTGGAGATGGTGTGAGAAGGCAAG 2207
Query 2196 GAAGGACAGGCCGTGGCTTTTCTTCCACGAGGTCTCTTAACCCAAATGGAGTAGATAAAC 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 2208 GAAGGACAGGCCGTGGCTTTTCTTCCACGAGGTCTCTTAACCCAAATGGAGTAAATAAGC 2267
Query 2256 TTAAGAATGTTGGAACAGCTAAACATCTTCGCAGTGCAAGACCTATTTTTGACAAGAGTG 2315
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 2268 TTAAGAATGTTGGAACAGCAAAACATCTTCGCAGTGCAAGACCTATTTTTGACAAGAATG 2327
Query 2316 AAAGTAAGGTGGGTCGTCCACCCACTAGGAAACTATCTGATCGTAAGGCCTACAAACGTC 2375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2328 AAAGTAAGGTGGGTCGTCCACCCACTAGGAAACTATCTGATCGTAAGGCCTACAAACGTC 2387
Query 2376 AGAGAGCTACGGCAACAAATGCTCCAACACTAGATTTTCATGTTGGTTCAAATGATGGCC 2435
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2388 AGAGAGCTACGGCAACAAATGCTCCAACACTAGATTTTCATGTTGGTTCAAATGATGGTC 2447
Query 2436 GTGAGGAGCTACTGGCAGCTGTCAACTCAGCTGTAAATTTTGGTCAGAATTTTCCCAACT 2495
|||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct 2448 GTGAGGAGCTACTGGCAGCTGTCAACTCAGCTATAAATATTGCTCAGAATTTTCCCAACT 2507
Query 2496 CTTTCTGGAAGCAAATGGAGCGCTACTTTTGCTATATATCTGATGATCATATCAATTTCA 2555
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2508 CTTTCTGGAAGCAAATGGAGCGCTACTTCGGCTATATATCTGATGATCATATCAATTTCT 2567
Query 2556 TGAAACAACAGGGAGAACTCTCCTCCATGGGTCCTACGCCCATTTTGACATCCTCTGAGT 2615
|||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||
Sbjct 2568 TGAAACAACAGGGAGAACTCTCCTCCATGGGTCCGACGCCCGTTTTGACATCTTCTGAGT 2627
Query 2616 TTGATAGCCGTGTGTTTCCCGAGGAACTTGCAACTAGCAGGGCGGATTCCAAGGCTTCTC 2675
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2628 TTGATAGCCCTGTGTTTCCTGAGGAACTTGCAACTAGCAGGGCGGATTCCAAGGCTTCTC 2687
Query 2676 CACTGTACCAGAGATTGCTATCAGCTTTGATTTCTGAGGACTCGATGGGTGTAAATGAAG 2735
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 2688 CACTGTACCAGAGATTGCTATCAGCCTTGATATCTGAGGACTCAATGGGTGTAAATGAAG 2747
Query 2736 ATTTACAAGTTGATGGATTTGGGGCTATGCATGACGATGACTCAGAATTCAGTGTTCTGA 2795
|||||||||||||| || || | ||||||||||||||||||||||||||
Sbjct 2748 ATTTACAAGTTGAT----------CT-TG-A---CGATGACTCAGAATTCAGTGTTCTGA 2792
Query 2796 ATAATATGGAGTTCAATGGGTTTAGAAACAATGAAAGGCTGGAACTTGATGAATCAGAAG 2855
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2793 ATAATATGGAGTTCAATGGGTTTAGGAACAATGAAAGGCTGGAACTTGATGAATCAGAAA 2852
Query 2856 ATGATGGGTCTGCGATTTTGTTCAAGGGTGTTAATAAGTCAGCCCACCACTGCAATGGCA 2915
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2853 ATGATGGGTCTGCAATTTTGTTCAAGGGTGTTGATAAGTCAGCCCACCACTGCAATGGCA 2912
Query 2916 AATTTCCAGATACTTCACCCATTGACTTCTTGGACATTCAATATGATAAATTGGGGATAG 2975
|||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||
Sbjct 2913 AATTTCCAGATAATTCACCCATTGACTTCGTAGATATTCAATATGATAAATTGGGGATAG 2972
Query 2976 ATGAAAAGATTTATCTGGAAGTCCAGTCTCTTGGAATATCCTTAGAACC-AATGCCTAGT 3034
||||||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||
Sbjct 2973 ATGAAAAGATTTATCTGGAAGCCCAGTCTCTTGGAATATCCATAGA-CCTAATGCCTAGT 3031
Query 3035 ATCTCAAACGTGGAGGATGAAGGAATTGCGGACGAAATTAAAAAGTTGGAGGAGGCTATC 3094
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 3032 ATCTCAAACGTGGAGGATGAAGGTATTGCTGACGAAATTAAAAAGTTGGAGGAGGCTATC 3091
Query 3095 TGCAACGAGGGTTCCAAGAAGAAAGAGATTGTGGATAGGCTACTAAAGCCTGCCATAGAG 3154
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3092 TGCAACGAGGGTTCTAAGAAGAAAGAGATTGTGGATAGGCTACTAAAGCCTGCCATCGAG 3151
Query 3155 ATGAAAGAATTTCAGGAGAAGGAGCTTGATCAACTTGGTTATGAAAAGCTCATCGAGATG 3214
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3152 ATGAAAGAACTTCAGGAGAAGGAGCTTGATCAACTTGGTTATGAAAAGCTCATCGAGATG 3211
Query 3215 GCATATGAAAAGAGCAAGGCAAGTCGGCGTCATCACAACGCTGGTGGAAAGAATTCCAAT 3274
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3212 GCATATGAAAAAAGCAAGGCAAGTCGGCGTCATCACAACGCTGGTGGAAAGAATTCCAAC 3271
Query 3275 AACAAGATTTCAAAGCAGGCTGCATTGGCTTTTGTTAGAGGGACGCTTGAACGATGCCAT 3334
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3272 AACAAGATTTCAAAGCAGGCTGCATTGGCTTTTGTTAGAAGGACGCTTGAACGATGCCAT 3331
Query 3335 CAATTCGAAAAGACGGG-AAGAAGCTGCTTCAGTGAGCCTGAATTTAAGGATATGTTCAT 3393
||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||
Sbjct 3332 CAATTCGAAAAGACGGGCAA-AAGCTGCTTTAGTGAGCCTGAAATTAAGGATATGTTCAT 3390
Query 3394 TGCCGGGTTGGCAACAGCCGAAGATACTCTCATGGACAAGGAGTATAATCCGTCAACTTC 3453
||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 3391 TGCGGGGTTGGCAACAGCTGAAGATACTCTCATGGACAAGGAGTATAATACGTCAACTTC 3450
Query 3454 AACACCCATGGGCTCACAGCCAAGCTCTTCGTTGGCA-TGCATTGGGCAGAACTCGGAGA 3512
||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||
Sbjct 3451 AACGCCCATGGGCTCACAGCCAAGCTCTTCGCTGGCACT-CATTGGGCAGAACTCGGAGA 3509
Query 3513 ACTATGCCAGTTCTTCTGATGTTCTACCATCTGAAAATGCTTTACTAGAACAAACGATGG 3572
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3510 ACTATGCCAAATCTTCTGATGTTCTACCATCTGAAAATGCTTTACTAGAACAAACGACGG 3569
Query 3573 GGAAAGAAGATACAGCATGGTCCAATAGGGTCAAGAAGAGAGAGTTGCTGCTTGATGATG 3632
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3570 GGAAAGAAGATACAGCATGGTCCAATAGGGTCAAGAAGAGAGAGTTGCTGCTCGATGATG 3629
Query 3633 TTGGTATTGGGGCACAACTCTCAAGTAATACAAAGGGGAAGAGAAGTGACAGGGACAGAG 3692
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3630 TTGGTATTGGGACACAACTCTCAAGTAATACAAAGGGGAAGAGAAGCGACAGGGACAGAG 3689
Query 3693 ATGGGAAAGGGCAGGCTTCATCTAGAGGCGGAACCAATAAGATCGGCCGGCCTTCCCTGT 3752
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3690 ATGGGAAAGGGCAGGCTTCATCTAGAGGCGGAACTAATAAGATCGGCCGGCCTTCCCTGT 3749
Query 3753 CCAATGCTAAGGGTGAAAGAAAAACGAAAGCAAAACCGAAGCAGAAAACAACTCAGATAT 3812
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3750 CCAATGCTAAGGGTGAAAGAAAAACAAAAGCAAAACCGAAGCAGAAAACAACTCAGATAT 3809
Query 3813 CTCCATCTGTTAGGGTCCCGGAGCAACCCAAACCATTGTTACCAAAACCGAATGAAGCAA 3872
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3810 CTCCATCTGTTAGGGTTCCGGAGCAACCCAAACCATCGTTACCAAAACCGAATGAAGCAA 3869
Query 3873 ACAGCGAGTATAATAACTTGGAAGCACTGGAGGAGACTGAGCCAATTCTCGATTTATCTC 3932
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 3870 ACAGCGAGTATAATAACTTGGAGGCACTGGAGGAGACAGAGCCAATTCTCGATTTATCTC 3929
Query 3933 AGTTACAAATACCAGATGGCTTAGGAGATTTTGATACGCAACCAGGTGATATTAGTTCAT 3992
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 3930 AGTTACAAATACCAGATGGCTTAGGAGATTTTGATGCGCAACCAGGTGATATTAATTCAT 3989
Query 3993 GGTTTAACATGGACGACGAAGAAGATTTCGATATCACGGAGCTTGGGATACCAATGGATG 4052
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct 3990 GGTTTAACATGGACGACGAAGAAGATTTCGATATGACGGAGCTTGGAATACCAACGGATG 4049
Query 4053 ATCTCTCAGGGCTGAACATAAAGTTATGAGGTCACCACTCCCTCTCACTCTATCTATAGT 4112
|| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 4050 ATATCTCAGAGCTGAACATAAAGTTATGAGGTCACCACTCCATCTCACTCTATCTATA-T 4108
Query 4113 -TGTATAGTCTTGTTGGTTATACTAGTTGACAAAAAGAGCGTAAGGTAAAAGAAAATTTT 4171
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||
Sbjct 4109 CTGTATAGTCTTGTTGGTTATACTAGTTGACAAAAAGAGAGTAAGGGAAAAGAAAAGTTT 4168
Query 4172 TGCTTCCTTGGGCGAATAACCAATACAGGAAATGGGTTATTCGGATGTTAGCTCCAGAAA 4231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4169 TGCTTCCTTGGGCGAATAACCAATACAGGAAATGGGTTATTCGGATGTTAGCTCCAGAAA 4228
Query 4232 ATTAGGTCATTTAGAttcttttcttcatcatcttctccttcttcttcttaggcttctttt 4291
|||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||
Sbjct 4229 ATTAGGTCATATAGATTCTTTTCTACATCTTCTTCTTCTTCTTCTTCTTAGGCTTCTTTT 4288
Query 4292 c-cgtcttcttATAACTCCGATTTCTCGGGTGAATCTCTTTTTACTTTGGTGATGGATGC 4350
|||||| ||||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct 4289 TTCGTCTTTTTATAACTCCGATTTCTTGGGTGAATCTCTTTGTACTTTTGTGATGGATGC 4348
Query 4351 TGGATTTGGATCCGGTGGGTAAACTAGGTTGATAGTTAACTTCCGGCTCTAACAAGCTGT 4410
|||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||
Sbjct 4349 TGGATTTGGATCCGCTGGGTAAGCTAGGTTGATAGTTAACTTCCGGCTGTAAGAAGCTGT 4408
Query 4411 TGTGGC 4416
||||||
Sbjct 4409 TGTGGC 4414
> AT4G29790.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G19390.1);
Has 538 Blast hits to 357 proteins in 124 species: Archae
- 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105;
Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). |
chr4:14582988-14590575 FORWARD LENGTH=4391
Length=4391
Score = 2658 bits (1439), Expect = 0.0
Identities = 3012/3739 (81%), Gaps = 238/3739 (6%)
Strand=Plus/Plus
Query 376 AGCTTGTCATGCT-CCAGTGTGTGTTTAGTGTTTAT-TATAAAACA-TAAGACTTTCGTG 432
||||||||||| | ||| ||| ||| || ||||||| |||||||| | ||| ||
Sbjct 239 AGCTTGTCATG-TACCACTGTTTGTATATTGTTTATAAATAAAACAGT-GGAC-TT--AA 293
Query 433 AGCTGAGGGAATGTCAGCACCTGGGAAGTTTGATTATTCTTCTGGTGGGCTAGATAGGCC 492
|| | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 294 AGTTAAGGGAATGTCAGCACCTGGGAAGTTTGATTATTCTTCTGGTGGGCCAGAGAGGCC 353
Query 493 TCTCTACAGATCTAACTTTGCCGCACAGATGGAAAGATCGAGTAGCTTTCGCGAGTCCAT 552
| | ||||| || ||||| || ||||| ||||||||||| ||||||||||| ||| | ||
Sbjct 354 TTTATACAGGTCCAACTTAGCTGCACAAATGGAAAGATCTAGTAGCTTTCGTGAGACGAT 413
Query 553 CGAACATTCTGTC-C--CATCTCATCCAATCATGTTGAGGACCACTTCACCAATAGCACA 609
|||||| ||||| | ||||||| || | ||||||||||| ||||||||||||||||||
Sbjct 414 GGAACATCCTGTCTCGTCATCTCACCCGAGCATGTTGAGGAGCACTTCACCAATAGCACA 473
Query 610 AACCGATGTAACAAA-TTTCTTTCAGTGTTTGCGTTTTGATCCTAAGGTGGTTGCCGCGG 668
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 474 AACCGATGTAACAAACTTT-TTTCAGTGTTTGCGTTTTGATCCTAAGGTGGTTGCCGCAG 532
Query 669 ATCACAAGTCTATTCGTCAAGGTGACTTTAAGCGACATGTTAGTATTGCTCTTGGAATAC 728
|||| ||||||||||||||||||||||||||||| ||||| | ||| |||||||| || |
Sbjct 533 ATCATAAGTCTATTCGTCAAGGTGACTTTAAGCGTCATGTGAATATCGCTCTTGGGATTC 592
Query 729 AAGGAGATGAGTCTCCTAGTGGATCTTTGAAAGGAAAGTTTATTCCATCGCCTATACCAG 788
|||||||||| ||||| || | | ||||||| ||||| |||||||| ||||||||||
Sbjct 593 AAGGAGATGAATCTCCAAGCACACCACTGAAAGGGAAGTTAATTCCATCTCCTATACCAG 652
Query 789 AAGAGATCAAAAGATTTAAGGCTGGTCTGCGCGAAAACAATGTGAAGGCCAGGGAGCGCG 848
|||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AAGAGATCAAGAGGTTAAAGGCTGGTCTGCGCGAAAACAATGTGAAGGCCAGGGAGCGTT 712
Query 849 TAAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGTTTTTCCCAAGTGTACCTACAA 908
| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 713 TGAAAATTTTCAACGAAGCTTCTTCTGTATTTAACAAGTTTTTTCCTAGTGTACCTACAA 772
Query 909 AGAAAAGGTCTCGACCTGAAGG--GTT-T--T-----CT--GGTGATCGGTTGG-TATCA 955
||||||||||||| || ||||| || | | || |||||||| |||| | | |
Sbjct 773 AGAAAAGGTCTCGTCCAGAAGGATTTTCTAATGACCGCTCAGGTGATCGTTTGGCT-TTA 831
Query 956 GGACCAGGCCTTGGTAAAATGGGAATTC-AGAGTCAGACCCTGGCTGGTGGTTTTGAGCT 1014
|| ||||| | |||||||||||||| | || ||||||| ||| ||||| ||||||||||
Sbjct 832 GGGCCAGGTATGGGTAAAATGGGAATCCAAG-GTCAGACTCTGCCTGGTTGTTTTGAGCT 890
Query 1015 TGACCAGCAAAAGTTTGATGAACGACCTAAAAGTGGTG--TTCCAAATAAGAGAACACGT 1072
||||||||||||| | || ||||||||||||||||||| || |||||| | ||||||
Sbjct 891 TGACCAGCAAAAGCTGGACGAACGACCTAAAAGTGGTGCATT--GAATAAGCGGACACGT 948
Query 1073 ACTTCTATGATGGATGTTCGAAGCAATTCTATTGTTCGACAGTC-GGCGGCTGTAGACAG 1131
||||| ||||||||||||||||| ||| ||||||||||||| || | ||| |||||||||
Sbjct 949 ACTTCCATGATGGATGTTCGAAGTAATGCTATTGTTCGACAATCAGCCGG-TGTAGACAG 1007
Query 1132 AGATAAAGAAATAATGCGGGTAGCAAATCATAATGCAGTTCAGGGTGAAGATCGAACTTC 1191
|||||||| | |||| || | ||||| ||||||||||||||||||||||||||| ||||
Sbjct 1008 GGATAAAGACACAATGAGGCTGGCAAACCATAATGCAGTTCAGGGTGAAGATCGATCTTC 1067
Query 1192 AATTGGTATTGATGGTTGGGAAACGTCAAAAATGAAGAAAAAACGCTCCT--CTATTAAT 1249
||||||||||||||||||||||| ||| ||||||||||||||||| | || | || ||
Sbjct 1068 AATTGGTATTGATGGTTGGGAAAAGTCGAAAATGAAGAAAAAACGAT-CTGGC-ATCAAA 1125
Query 1250 GCGGACT-G-CCATCCTAACTTGGCTTCAAATAAAG-TGGTTGATGGTTACCGAGACTTG 1306
| || | | || | ||| |||||||||||||||| | ||||||||||| | ||||||
Sbjct 1126 ACAGA-TGGTCC-TTCTAGTTTGGCTTCAAATAAAGCT-GTTGATGGTTATAGGGACTTG 1182
Query 1307 AAGCAGGGCATACAACAGAAATCAACAGGCGACTCCCGGTCGAGATTGAATGGTGACTCA 1366
|| |||||||||| | ||||| | | | || ||||| |||||||||||||||||||||
Sbjct 1183 AAACAGGGCATAC--C-GAAATTAGCTGTTGATTCCCGCTCGAGATTGAATGGTGACTCA 1239
Query 1367 AACATGTTAAGGCAAT-CGACTAGT-AATGGAGCTACTGGGTATGGAAGATCTGATAACA 1424
||||||||||||| || | | ||| ||||| ||| | ||||| |||||||||| |
Sbjct 1240 AACATGTTAAGGC-ATGGGGC-AGTGAATGGCGCTGTTCCATATGGGAGATCTGATAGCC 1297
Query 1425 TCTCCCACCAGACGA-GCCTGGCTGGGCATT-C-TCCACTGCCGAGGGTTGATTCTGATC 1481
|||| || ||||| | | |||| | || || | | | || || | || ||||| ||||
Sbjct 1298 TCTCTCAGCAGAC-AGGTTTGGCAGCGCGTTCCTTGCTCT-CC-A-GG--GATTCCGATC 1351
Query 1482 ATAATTCTTTGTACAATGAGAAGAGAGAACGCTCGATTGGCTCAGATAAGGAAAGGGTGA 1541
| ||| | ||||||||||||||||||||||| | | ||| |||||||||||||||||||
Sbjct 1352 ACAATCCGTTGTACAATGAGAAGAGAGAACGAGCTACTGGTTCAGATAAGGAAAGGGTGA 1411
Query 1542 ATCTCAGGGGAGTCAACAAGTCAAATATTCATGATGAATTCAATTCTTCAAGTCTGGTTT 1601
||||||||| |||||||||||||||||||||||||||| |||||||||||||| | ||
Sbjct 1412 ATCTCAGGGCTGTCAACAAGTCAAATATTCATGATGAATCCAATTCTTCAAGTCCGACTT 1471
Query 1602 CAAACAC-AAAAACAAATGCTTCAGTTCGTGGACCTAGATCAGGATCGGGGCTACCACCA 1660
||||| | ||||| || ||||||||||||||| || ||||| ||||| ||||| || ||
Sbjct 1472 CAAAC-CTAAAAATAAGTGCTTCAGTTCGTGGTCCAAGATCGGGATCAGGGCTGCCGCCG 1530
Query 1661 AAACTGTCTCCAGG-ACTCCATAACACTCCGTCCCCAATTGAATGGGATATCT-CTGGCT 1718
||||| ||||| || ||||||||||||| || |||| ||| |||||||| | ||||||
Sbjct 1531 AAACTTTCTCC-GGTTGTCCATAACACTCCCTCTCCAAGTGATTGGGATAT-TGCTGGCT 1588
Query 1719 GTACGAATAAGCCTCCAACATTGTCAGGAGTTACAC-ATCGCAAGCGTATGACATCAAAT 1777
|||| || || |||||| ||||| || ||| | | ||||||||||||||||||| |||
Sbjct 1589 GTACAAACAAACCTCCATTGTTGTCTGGGGTT-CCCAATCGCAAGCGTATGACATCGAAT 1647
Query 1778 CGGTCTTCATCACCACCTGTCACTCAGTGGGCCAGTCAAAGACCACAAAAGATATCCCG- 1836
|||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct 1648 CGGTCTTCATCACCACCTGTAACTCAATGGGCCAGTCAAAGACCACAAAAGATCTCCCGT 1707
Query 1837 GATAGCAAGGAGGAC-AACTTTAGTGCCCATTGTTTCTAGTAACGACGA-AGTTCCCTAC 1894
| | |||||||| || ||| || || ||||||||||| || || || || | |||| | |
Sbjct 1708 G-TTGCAAGGAGAACGAAC-TTGGTCCCCATTGTTTCGAGCAATGATGACA-TTCCGT-C 1763
Query 1895 -TCTGATAATATATCAGATGCTGGTTGTAGTGAAACTGGGTTTGGATTTCATAAACGTTC 1953
|| ||||| || ||||||| ||||||||||||||| | ||||||||| ||| ||| ||
Sbjct 1764 ATCGGATAACATGTCAGATGTTGGTTGTAGTGAAACAAGTTTTGGATTTTATAGACGCTC 1823
Query 1954 GCCAGCTGCTTCTCCTCAATTGAAGCTAAAAGGTGAAAGCAGCTTCTCCACTGCAGCCTT 2013
||| || |||||||| ||| |||| | |||||||||| ||||| || || |||| ||
Sbjct 1824 GCCTGCAGCTTCTCCACAAATGAAAATGAAAGGTGAAAATAGCTTGTCTACAACAGCTTT 1883
Query 2014 ATCAGAAAGTGAAGAA-TCTGGCCCCCCTGAGATCAAATCTAAAGACAAGGGTAAACAGT 2072
||| | |||||||||| || ||||||||||||||||||||||||||||||| ||||| |
Sbjct 1884 ATCTGGAAGTGAAGAATTC-AGCCCCCCTGAGATCAAATCTAAAGACAAGGGAAAACAAT 1942
Query 2073 CTGATGAGGTTGATGGGAAAGCTGCACAAAATATTCCTAGAGTGTCCATCCCTGCTTTAC 2132
|||||||||| |||| ||| || | || ||| |||||| ||| |||||||||| |||||
Sbjct 1943 CTGATGAGGTAAATGGTAAAACTTCTCAGAATGTTCCTAAAGTCTCCATCCCTGGTTTAC 2002
Query 2133 AATCAAGAAAAAGTAACAAGCCTGCAGCTGGTGAAGAGATTGGGGATGGTGTGAGAAGGC 2192
||||||| |||| ||||| | ||| |||| |||||| |||||||||||||||| || |
Sbjct 2003 AATCAAG-AAAA--AACAAACTTGCCTCTGGAGAAGAGCTTGGGGATGGTGTGAGGAGAC 2059
Query 2193 AAGGAAGGACAGGCCGTGGCTTTTCTTCCACGAGGTCTCTTAACCCAAATGGAGTAGATA 2252
||||||||||||||||||||||| |||| || |||||| | ||||| ||||| | || |
Sbjct 2060 AAGGAAGGACAGGCCGTGGCTTTGCTTCAACAAGGTCTGTCAACCC-AATGG-G-AG-T- 2114
Query 2253 AACTTAAGAATGTTGGAACAGCTAAACATCTTCGCAGTGCAAGACCTATTTTTGACAAGA 2312
|| | ||| ||||||||| ||||| ||||||||||||||| | || ||||||||
Sbjct 2115 AA--T--GAAACATGGAACAGCAAAACAACTTCGCAGTGCAAGAAATGGTTCTGACAAGA 2170
Query 2313 GTGAAAGTAAGGTGGGTCGTCCACCCACTAGGAAACTATCTGATCGTAAGGCCTACAAAC 2372
|||||| | || ||||||||||||||||||||||| ||||| || ||||| |||||||
Sbjct 2171 ATGAAAGCAGGGCAGGTCGTCCACCCACTAGGAAACTCTCTGACCGCAAGGCTTACAAAC 2230
Query 2373 GTCAGAGAGCTACGGCAACAAATGCTCCAACACTAGATTTTCATGTTGGTTCAAATGATG 2432
|||||| | ||| || || |||||| ||||||||||||||| || | ||||||
Sbjct 2231 GTCAGAAAAATACAGCGACCAATGCTACAACACTAGATTTTC---TT-G-----ATGATG 2281
Query 2433 GCCGTGAGGAGCTACTGGCAGCTGTCAACTCAGCTGTAAATTTTGGTCAGAATTTTCCCA 2492
| | ||| |||||||| || ||||| ||||| ||| | || |||| ||| |||||||| |
Sbjct 2282 GGCATGAAGAGCTACTAGCTGCTGTTAACTCGGCTATCAACTTTGCTCAAAATTTTCCTA 2341
Query 2493 ACTCTTTCTGGAAGCAAATGGAGCGCTACTTTTGCTATATATCTGATG-ATCATATCAAT 2551
||| ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||
Sbjct 2342 GCTCGTTCTGGAAGCAAATGGAGCGCTACTTTTGCTTTATATCTGATGCA-CATATCAAT 2400
Query 2552 TTCATGAAACAACAGGGAGAACTCTCCTCCATGGGTCCTACGCCCATTTTGACATCCTCT 2611
||||||||||| ||||| |||||||||| ||||||| |||| || | |||||| ||
Sbjct 2401 TTCATGAAACAGCAGGGCGAACTCTCCTTCATGGGTACTACACCTGGTGGGACATCTTCA 2460
Query 2612 GAGTTTGATAGCCGTG---TGTTTCCCGAGGAACTTGCAACTAGCAGGGCGGATTCCAAG 2668
|| |||||||| | || | ||||||||||||||||||| ||||| | |||||| ||
Sbjct 2461 GACTTTGATAGTCATGAAATATTTCCCGAGGAACTTGCAAGTAGCAAAGTGGATTCTAAA 2520
Query 2669 GCTTCTCCACTGTACCAGAGATTGCTATCAGCTTTGATTTCTGAGGACTCGATG--GGTG 2726
||| | || || || |||||||||||||||||| | ||||| |||||||| | | |||
Sbjct 2521 GCTGCCCCCCTTTATCAGAGATTGCTATCAGCTCTAATTTCCGAGGACTC-A-GCCAGTG 2578
Query 2727 TAAATGAAGATTTACAAGTTGATGGATTTGGGGCTATGCATGACGATGACTCAGAATTCA 2786
||||||||||||||||| ||||||||||| || | || || | ||| ||||||||||
Sbjct 2579 TAAATGAAGATTTACAATTTGATGGATTT--GG--A-GC-CGATGTTGAGTCAGAATTCA 2632
Query 2787 GTGTTCTGAAT-A-AT-ATGGAGTTCAATGGGTT-TAGAAACAATGAAAGGCTGGAACTT 2842
||||| ||||| | || |||||||||||| |||| ||| | | || || |||||| ||
Sbjct 2633 GTGTTTTGAATCATATGATGGAGTTCAAT-GGTTATAGGAGC---GATAGACTGGAATTT 2688
Query 2843 GATGAATC-AGAAGATGATGGGTCTGCGATTTTGTTCAAGGGTGTTAATAAG-TCAGCCC 2900
|||| | | ||||||||||| ||||| || | |||||||||||||| || ||||| |
Sbjct 2689 GATG-AGCTAGAAGATGATGTGTCTGTTATCCCGCTCAAGGGTGTTAAT-AGCTCAGCAC 2746
Query 2901 ACCACTG-CAATGGCAA-A-TTTCCAGATAC-TTCACCCATTGACTTCTTGGACATTCAA 2956
|||| || |||||| || | ||| ||||| | || | |||| ||||||| ||||||||
Sbjct 2747 ACCA-TGTCAATGG-AAGACTTT-CAGAT-CATTTATCCATCGACTTCTCAGACATTCAG 2802
Query 2957 TATGATAA-ATTGGGGATAGATGAAAAGATTTATCTGGAAGTC-CAGTCTCTTGGAATAT 3014
||||| || |||||||||||||| ||||||||| |||||| | || ||| ||||||| |
Sbjct 2803 TATGA-AACTTTGGGGATAGATGAGAAGATTTATATGGAAG-CTCAATCTATTGGAATTT 2860
Query 3015 CCTTAGAACCAATGCCTAGTATCTCAAACGTGGAGGATGAAGGAATTGCGGACGAAATTA 3074
||| || || ||||||||||| ||||||||||| ||||||||||||| || || || |
Sbjct 2861 GCTTGGACCCCATGCCTAGTATTTCAAACGTGGAAGATGAAGGAATTGTTGATGACATCA 2920
Query 3075 AAAAGTTGGAGGAGGCTATCTGCAACGAGGGTTCCAAGAAGAAAGAGATTG-TGGATAGG 3133
||| ||| ||||| ||||| || | | || ||||||||||||||| | || || || ||
Sbjct 2921 AAACGTTAGAGGAAGCTATTTGTGAGGTGGTTTCCAAGAAGAAAGATA-TGTTGAATCGG 2979
Query 3134 CTACTAAAGCCTGCCATAGAGATGAAAGAATTTCAGGAGAAGGAGCTTGATCAACTTGGT 3193
||| ||||||||||| |||||||||||||| ||||||||||||| |||| | || |||
Sbjct 2980 CTATTAAAGCCTGCCCTAGAGATGAAAGAACGTCAGGAGAAGGAGTTTGAGCGGCTCGGT 3039
Query 3194 TATGAAAAGCTCATCGAGATGGCATATGAAAAGAGCAAGGCAAGTCGGCGTCATCACAAC 3253
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |
Sbjct 3040 TATGAAAAACTCATCGAAATGGCATATGAAAAGAGCAAGGCAAGTCGGCGGCATCACT-C 3098
Query 3254 -GCTGGTGGAAAGAATTCCAATAAC-AAGATTTCAAAGCAGGCTGCATTGGCTTTTGTTA 3311
|| ||||||||| ||| | | ||||| ||||||||||| || || |||||||| |
Sbjct 3099 TGCAAGTGGAAAGAGTTCGGCGA-CTAAGATATCAAAGCAGGCCGCGTTTGCTTTTGTGA 3157
Query 3312 GAGGGACGCTTGAACGATGCCATCAATTCGAA-AAGACGGG-AAGAAGCTGCTTCAGTGA 3369
| |||| |||||| |||| | |||||||||| || || || || ||| ||||| |||||
Sbjct 3158 AAAGGACACTTGAAAGATGTCGTCAATTCGAAGAA-ACAGGCAA-AAGTTGCTTTAGTGA 3215
Query 3370 G-CCTGAATTTAAGGATATGTTCATTGCCGGGTTGGCAACAGCC-GAAGATACTCTCATG 3427
| || | |||||| |||| |||||||||||||| || || ||||||| || ||
Sbjct 3216 GTCCACA-TTTAAGAATATCATCATTGCCGGGTTGACA-CAATTTGAAGATAATCCCACA 3273
Query 3428 GACAAGGA-GTATAATCCGTCAACTTCAACACCCATGGGCTCACAGCCAAGCTCTTCGTT 3486
|||||||| | ||| || ||| ||||||||| |||||| ||||| |||||||| || ||
Sbjct 3274 GACAAGGAAG-ATATTCTATCAGCTTCAACACTCATGGGATCACAACCAAGCTCATCATT 3332
Query 3487 GGCAT-GC-ATTGGG-CAGAACTCGGAGAA-CTATGCCAGTTCTTCTGATGTTCTACCAT 3542
||||| || | || |||| | ||||||| | |||||| || | || |
Sbjct 3333 GGCATTGCCAATGACACAGAGCACGGAGAATC-ATGCCA---------AT-T-CT----T 3376
Query 3543 CTGAAAATGCTTTACTAGAA--CAAACGATGGGGAAAGAAGATACAGCATGGTCCAATAG 3600
||||||||||||||| ||| || | |||| ||| ||| | ||||| |||||
Sbjct 3377 CTGAAAATGCTTTACGGGAAGGCAGA-GATG---AAAT--GAT---G--TGGTCAAATAG 3425
Query 3601 GGTCAAGAAGAGAGAGTTGCTGCTTGATGATGTTGGTATTGGGGCACAACTCTCAAGTAA 3660
| ||||||||||| ||||||||||||||||| ||| ||| || ||| ||||| |
Sbjct 3426 AATGAAGAAGAGAGAATTGCTGCTTGATGATGTGGGT---GGGAAACCACTATCAAGCAG 3482
Query 3661 TAC-AAAGGGGAAGAGAAGTGACAGGGACAGAGATGGGAAAGGGCAGGCTTCATC-T-A- 3716
||| ||||| ||||||||||| |||||||||||||| ||||| |||||||| || | |
Sbjct 3483 TACGAAAGGA-AAGAGAAGTGAGAGGGACAGAGATGGAAAAGGACAGGCTTCTTCGTCAA 3541
Query 3717 GAGGCGGAA-C-C-AATAAGATCGGCCGGCCTTCCCT-GTCCAATGCTAAGGGTGAAAGA 3772
||||||||| | | || |||||||| |||||| | || || ||||| ||||||||| |
Sbjct 3542 GAGGCGGAAGCACTAACAAGATCGGTCGGCCTGCGCTTGTA-AATGCCAAGGGTGAACGG 3600
Query 3773 AAAACGAAAGCAAAACCGAAGCAGAAAACAACTCAGATATCTCCATCTG-TT--AG--G- 3826
||| | ||| ||||||||| ||| |||||||||| ||| | | | ||| || | |
Sbjct 3601 AAATCAAAAACAAAACCGAGGCAAAAAACAACTCCGATGTTTTCTTCTTCTTCTACTTGT 3660
Query 3827 GTCC----CG-G-AGCAACCCA-AAC--CATTGTTACCAAAACCGAA-TGA-AGCAA-A- 3873
||| || | ||||| ||| ||| |||||| | ||||| || | | ||||| |
Sbjct 3661 GTCAATATCGTGGAGCAAACCAGAACATCATTGT--CGAAAAC--AACTAACAGCAACAA 3716
Query 3874 CAGCGAGTATAATAACTTGGA-AGCACTGGAGGAGACTGAGCCAATTCTCGATTTATCTC 3932
||||||||||| ||||||||| | ||||||| ||| | ||||| | || || ||||||
Sbjct 3717 CAGCGAGTATAGTAACTTGGAGA-CACTGGATGAGTCAGAGCC--T-CTTGACCTATCTC 3772
Query 3933 AGTTACAAATACCAGATGGCTTAGG------AGAT--TTT-GATACGCAACCAGGTGATA 3983
| | || |||||||| || ||||| |||| ||| ||||| ||| |||| |||
Sbjct 3773 ACCTGCAGATACCAGACGGTTTAGGTGGTCCAGATGATTTCGATACACAAGCAGGAGATC 3832
Query 3984 TTAGTTCATGGTTTAACAT 4002
| || |||||||| |||||
Sbjct 3833 TAAGCTCATGGTTGAACAT 3851
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 220182712827
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5