BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480558
Length=2341
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16750.1 | Symbols: | Protein kinase protein with adenine n... 2191 0.0
AT4G35030.3 | Symbols: | Protein kinase superfamily protein | ... 815 0.0
> AT2G16750.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr2:7271012-7274693
FORWARD LENGTH=2428
Length=2428
Score = 2191 bits (1186), Expect = 0.0
Identities = 1348/1425 (95%), Gaps = 16/1425 (1%)
Strand=Plus/Plus
Query 905 CAAAGAGCTTGCGAAAACAACGGGTCAAGAGAAGAGGAAGATTTCAGGAAGATCGCTATC 964
|||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct 840 CAAAGATCTTGCGAAAACAACGGGTCAAGAGAAGAGAAAGATATCAGGAAGATCTCTATC 899
Query 965 TCTTCCATCGGTAGAGGTAGTAGACCAGACACCGGGCTGGCCATTGCTAAGAACAACCAC 1024
||||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||
Sbjct 900 TCTTCCATCGGTAGAGGTAGTAGACCAGACACCAGGTTGGCCATTACTAAGAACATCCAC 959
Query 1025 TTTAGCTACTTCAATGGTTCAGCATCAGACTAGGAAAATATCAGTTGTCAATTGGGTCAT 1084
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 960 TTTAGCTACTCCAATGGTTCAACATCAGACTAGGAAAATATCAGTTGTCAATTGGGTCAT 1019
Query 1085 GAGCTTGCCTGAACGATTTCCACATCATCCGAAT-ATGACTTCTCAACCGAGCTTTT-TC 1142
||||||||||||| |||||||||||||||||||| | ||||| ||||| |||||||| |
Sbjct 1020 GAGCTTGCCTGAAAGATTTCCACATCATCCGAATCA-GACTTGTCAACAGAGCTTTTGT- 1077
Query 1143 GATAAACAACTTAAAGACATACTAAAGGAAATAAACAGATGGTTCAGCTATGATGTTCTC 1202
||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct 1078 GATAAACAACTTAAAGACATACTCAAGGACATAAACAGATGGTTTAGCTATGATGTTCTC 1137
Query 1203 AAGATAGCAACATCAAATTTCTCTTCAGAGAATCTGATCGGAAAAGGAGGATGTAACGAA 1262
|||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1138 AAGACAGCAACATCAGATTTCTCTTTAGAGAATCTGATCGGAAAAGGAGGATGTAATGAA 1197
Query 1263 GTGTACAAAGGGTTTCTTGAAGATGGAAAAGCCGTGGCGGTGAAGATCTTGAGACCATCT 1322
|| ||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||
Sbjct 1198 GTTTACAAAGGGTTTCTTGAAGATGGTAAAGGCGTGGCAGTGAAGATCTTGAAACCATCT 1257
Query 1323 GTAAAAGAAGCAGTGAAGGAGTTTGTTCATGAAGTGAGCATAATATCTTCTTTGAGTCAC 1382
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 1258 GTAAAAGAAGCAGTGAAGGAGTTTGTTCATGAAGTGAGCATAGTCTCTTCTTTGAGTCAC 1317
Query 1383 TCAAACATCTCTCCTTTGATTGGTCTATGCGTTCATTACAACGATCTAATCTCTGTTTAC 1442
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 1318 TCAAACATCTCTCCTTTGATTGGTGTATGCGTTCATTACAACGACCTAATCTCTGTTTAC 1377
Query 1443 AATCTCTCATCCAAAGGGAGTTTGGAGGAAACTCTTCAGGGTAAGCATGTATTGAGATGG 1502
|||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1378 AATCTCTCTTCCAAAGGGAGTTTGGAGGAGACTCTTCAGGGTAAGCATGTCTTGAGATGG 1437
Query 1503 GAAGAGAGATTCAAGATAGCAATTGGGTTAGGGGAAGCTCTTGATTATCTCCATAACCAA 1562
||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1438 GAAGAGAGACTCAAGATAGCAATAGGGTTAGGGGAAGCTCTTGATTATCTACATAACCAA 1497
Query 1563 TGTTCTAATCCTGTGATCCACAGAGATGTCAAATCTTCAAATGTTCTTCTCTCAGATGAG 1622
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1498 TGTTCTAATCCTGTGATCCACAGAGATGTCAAATCTTCCAATGTTCTTCTCTCAGATGAG 1557
Query 1623 TTCGAACCTCAGCTTTCGGATTTCGGTCTTTCGATGTGGGGATCAAAGTCTTGTCCATAC 1682
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1558 TTCGAACCTCAGCTTTCGGATTTCGGTCTTTCGATGTGGGGATCGAAGTCTTGTCGATAC 1617
Query 1683 ACGATACAAAGAGATGTGGTGGGGACATTTGGATATCTTGCTCCTGAGTACTTTATGTAT 1742
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1618 ACGATACAAAGAGATGTGGTGGGTACATTTGGATATCTAGCTCCTGAGTACTTTATGTAT 1677
Query 1743 GGAAAAGTTAGCGATAAAGTTGATGTATATGCCTTTGGAGTAGTTTTGCTCGAACTCATT 1802
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1678 GGAAAAGTTAGCGATAAAGTCGATGTATATGCCTTTGGAGTAGTTTTGCTTGAACTCATT 1737
Query 1803 TCAGGAAGAACTCCTATTTCATCTGATAGCCCAAGAGGACAAGAGAGTTTGGTCATGTGG 1862
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1738 TCAGGAAGAACTTCTATTTCATCTGATAGCCCAAGAGGGCAAGAGAGTTTGGTCATGTGG 1797
Query 1863 GCAAAACCAATGATCGAAAAAGGCAATGCAAAAGAGCTCTTGGATCCGAATATTTCTGGG 1922
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1798 GCAAAACCAATGATCGAAAAAGGCAATGCAAAAGAGCTCTTGGATCCGAATATTGCTGGT 1857
Query 1923 ACTTTCGATGAGGATCAGTTTCATAAGATGGTTCTTGCTGCTACACATTGTCTCACAAGA 1982
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 ACTTTCGACGAGGATCAGTTTCATAAGATGGTTCTTGCTGCTACACATTGTCTCACAAGA 1917
Query 1983 GCAGCCACTTATCGTCCCAATATCA-GACAGATATTGAAGCTGCTAAGAGGCGAAGATGA 2041
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1918 GCAGCCACTTATCGTCCCAATATCAAGG-AGATATTGAAGCTGCTAAGAGGCGAAGATGA 1976
Query 2042 TGTCTCGAAATGGGTGAAGATAGTAGAAGAAGACGAAGATTGTTTCGACGACGAGGTTTA 2101
||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||
Sbjct 1977 TGTCTCGAAATGGGTGAAGATAGAAGAAGATGACGAAGATGGTTTCGACGACGAGGTTTA 2036
Query 2102 CCCAAATTCGAATACAGAATTACACTTGAGCCTCGCGATGGTCGATGTGGAAGATAATGA 2161
|||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 2037 CCCAAATTCGAACACAGAATTACACTTGAGCCTCGCGATGGTTGACGTGGAGGATAATGA 2096
Query 2162 CTCTGTGTCAATCAGTAGCTTGGAGAGAAGTAACAACAGCCTTTTTTCTTCTTCTTC--C 2219
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2097 CTCTGTGTCAAACAGTAGCTTGGAGAGAAGTAACAACAGCCTTTTTTCTTCTTCTTCTTC 2156
Query 2220 T-C-TC--AGGAGCTTCAGTCTTAATTAGGGTTTGTGCGTAG-T-GTCTCCAGTTCACTT 2273
| | || |||||||||||||||||||||||||||||| ||| | |||||||||||||||
Sbjct 2157 TTCCTCTCAGGAGCTTCAGTCTTAATTAGGGTTTGTGCTTAGCTTGTCTCCAGTTCACTT 2216
Query 2274 GAGGA-TCACGTCATCTCTCACTGTATCTGCACTCAATATATCAC 2317
||||| | ||||||||||| || || |||||||||||||| ||||
Sbjct 2217 GAGGACT-ACGTCATCTCTTACGGTGTCTGCACTCAATATGTCAC 2260
Score = 1088 bits (589), Expect = 0.0
Identities = 764/843 (91%), Gaps = 33/843 (4%)
Strand=Plus/Plus
Query 35 aaaaattaaaaattaaaaaaaggaagtaaatcggaaaaacaaaatTGGTCCCCTGTCTTC 94
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 27 AAAAATTAAAAATTAAAAAAAGGAAGTAAATTGAAAAAACAAAATTGGTCCCCTGTCTTC 86
Query 95 TTTTGCTCACTGGACCCTTTTCTTGGCTTCGCTCAATCATACTATCTCTTTCTTCTCACC 154
||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 87 TTTTGTTCACTGGACCCTTTTCTTGGCTTCGCTAAATCATACTATCTCTATCTTCTCACC 146
Query 155 GACACTTTCTTCTTCTTTGATCATATCATTTTTATCTTCACTATATaaaaaaaaTCAA-T 213
||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||| |
Sbjct 147 GACACTTTCTTCTTCTTTGATCATATCATATTTATCTTCAC--TACAAAAAAAA-CAAGT 203
Query 214 CAAAATAAAGCCAATCTTCTTAAATTTCTCCAGAAGATAGATCAGCATTTACGTATTTCA 273
|||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct 204 -AAAATAAAGCCAATCTTCTTAAATATCTCCAGAAGATCTATCAGCATTTACGTA-TTCA 261
Query 274 GGTCCTCCAATGTGTTCTTCTCACAAAGaaaaaaaaaGTTTTGAGAGCAAAACAGAAA-A 332
|||||||||| | |||||||||||||| |||||| || || |||| | ||| |
Sbjct 262 GGTCCTCCAA--T-TTCTTCTCACAAAG----AAAAAG----GA-AG-AAAA-A-AAAGA 306
Query 333 ATGGCAGTG-GAG-AAAGACAGAAA----AGTGGATCATGTAATTGTGAAGCAGAGGAAT 386
| | ||| ||| ||| | | ||| ||||||| | || |||||||||||||||||
Sbjct 307 A--GTTGTGAGAGCAAA-AAAAAAATGGCAGTGGATAAAGTGATTGTGAAGCAGAGGAAC 363
Query 387 ATTGTATTGGTTGGAATTCGAATTGATGAAAGTGGCAAAGAGATCTTGAAATGGGCACTT 446
||| ||||||||||||||| |||||||||||||||| |||| | || ||||||||||||
Sbjct 364 ATTATATTGGTTGGAATTCCAATTGATGAAAGTGGCGTAGAGGTTTTAAAATGGGCACTT 423
Query 447 GAAGAAGTTGCAGAACATGGAGATTGTGTTGTTGTTGTCCATGTTTGTTTTACTTCTTAC 506
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 424 GAAGAAGTTGCAAAACATGGAGATTGTGTTGTTGTTGTCCATGTTTGTTTTACTTATTAC 483
Query 507 CGTGCCTTGAAAAGCAAGTCATCGCTTGATCGGTATTTGAATCTTTACAGTGAATTCTGC 566
|||||||||||||||||||||||||| |||||||| || || | |||| ||||||||||
Sbjct 484 CGTGCCTTGAAAAGCAAGTCATCGCTGGATCGGTACTTAAAACCATACATTGAATTCTGC 543
Query 567 TCAACAAAGAAGATTGAGCTCAAAGGAGAAGTTTTGAAGGGAAATTCAGTTCTAGGGGTT 626
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 544 TCAACAAAGAAGATTGAGCTCAAAGGAGAAGTGTTAAAGGGAAATTCAGTTCTAGGGGTT 603
Query 627 TTAGTTAAAGAGGCAAAGAGATACAACGCCATGTCAGTTGTTGTTGGAGTTAAACAACAA 686
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 TTAGTTAAAGAAGCAAAGAGATACAACGCCATGTCAGTTGTTGTTGGAGTTAAACAACAA 663
Query 687 AGAAAATTAAGTCTAAAAATAGCTAAAGGCTGCGCAAAAGAGCTTCCCTCAACAACCGAT 746
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 664 AGTAAATTAAGTCTAAAAATAGCTAAAGGCTGCGCAAAAGAGCTTCCTTCAACCACCGAT 723
Query 747 GTTTTGGCCATCCATAGAGGGAGTATAGTCTTTAGACGGTCCAACCATTACCAACTACCT 806
||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 724 ATTTTGGCCATCCACAGAGGGAATATAGTCTTTAGACGTTCCAACCATTACCAACTACCT 783
Query 807 CTTGCTCAAAAGATGAGTTCAAGACCAAGTTCTGAACT-TGCTGATGGATTTTCAGACAA 865
|||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct 784 CTTGCTCAAAAGATAAGTTCAAGACCAAGTTCTGAACTCT-CTGAAGGATTTTCAGACAA 842
Query 866 AGA 868
|||
Sbjct 843 AGA 845
> AT4G35030.3 | Symbols: | Protein kinase superfamily protein
| chr4:16675702-16678206 FORWARD LENGTH=1727
Length=1727
Score = 815 bits (441), Expect = 0.0
Identities = 1069/1363 (78%), Gaps = 80/1363 (6%)
Strand=Plus/Plus
Query 926 GGGTCAAGAGAAGAGGAAG-ATTTCAGGAAGATC-GCTATCTCTTCCATCGGTAG--A-G 980
|||| |||| |||||| || |||||||||||||| | | || ||||||||| ||| |
Sbjct 139 GGGTGAAGAAAAGAGG-AGAATTTCAGGAAGATCAG-TTTCACTTCCATCGATAGACATA 196
Query 981 GTAGTAGACCAGACACCGGGCTGGCCATTGC-TAAGAACAACCACTTTA--G-CTACTTC 1036
|| ||||| ||| ||| || |||||||| | ||| || | | | |||| | | || |
Sbjct 197 TTACTAGACGAGAAACCAGGTTGGCCATTTCTTAA-AAGAGCAAGTTTAGGGAC-ACCAC 254
Query 1037 AA-TGGTTCAGC--AT--CAGACTAGGAAAA-TATCAGTTGTCAATTGGGTCATGAGCTT 1090
|| ||||| | || || || | ||||| | ||||| ||||||||||||||||||||
Sbjct 255 AACAAGTTCA-CAAATGGCACAC-ACGAAAAGTCTCAGTGGTCAATTGGGTCATGAGCTT 312
Query 1091 GCCTGAACGATTTCCACATCATC--C-GAATAT-GACTTCTCA-ACCGAGCTTTTTCGAT 1145
|||||||| |||||| |||||| | || | | || | | | | | ||||| | |
Sbjct 313 ACCTGAACGGTTTCCAAATCATCAACAGACTCTAAAC-TATGAGA-CAAGCTTGATAAAG 370
Query 1146 AAACAACTTAAAGACATACTAAAG-GA-AATAAACAGATGGTTCAGCTATGATGTTCTCA 1203
|||||| | || |||||| | || || ||| |||| |||||||| ||| ||||||| |
Sbjct 371 AAACAAATCAAGGACATA-TTGAGAGACAAT-AACAAATGGTTCAACTACAATGTTCTTA 428
Query 1204 AGATAGCAACATCAAATTTCTCTTC-AGAGAATCTGATCGGAAAAGGAGGATGTAACGAA 1262
|| |||||||||| ||||||| || ||||||| |||| || ||||||||||| ||||||
Sbjct 429 GGAAAGCAACATCAGATTTCTC-TCAAGAGAATGTGATTGGGAAAGGAGGATGCAACGAA 487
Query 1263 GTGTACAAAGGGTTTCTTGAAGATGGAAAAGCCGTGGCGGTGAAGATCTTG-AGACCATC 1321
|||||| |||| |||||||||||||||||| | | || ||||| |||||| || ||||
Sbjct 488 GTGTACCGAGGGATTCTTGAAGATGGAAAAGGCATTGCAGTGAAAATCTTGAAG-TCATC 546
Query 1322 -TGTAAAAGAAGCAGTGAAGGAGTTT-GTTCATGAAGTGAGCATAATATCTTCTTTGAGT 1379
| | ||||||||| || | | ||| ||||||||| | | ||| || ||||||||||||
Sbjct 547 ATCT-AAAGAAGCAATG-ACAAATTTCGTTCATGAAATCAACATTATCTCTTCTTTGAGT 604
Query 1380 CACTC-AAACATCTCTCCTTTGA-TTGGTCTATGCGTTCATTACAACGATCTAATCTCTG 1437
||| | ||||||||| || || | ||||| | || || || |||| || |||||||| |
Sbjct 605 CAC-CAAAACATCTCACCGTT-ACTTGGTGTTTGTGTCCAAGACAATGAACTAATCTCCG 662
Query 1438 TTTACAATCTCTCATCCAAAGGGAGTTTGGAGGAAACTCTTCAGGGTAAGC--------- 1488
|||||||||| ||| || ||| ||||| || ||||| ||||| |||||||
Sbjct 663 TTTACAATCTTTCAAACACAGGAAGTTTAGAAGAAACCCTTCACGGTAAGCAAAAGGGAA 722
Query 1489 ---ATGTATTGA-GATGGGAAGAGAGATTCAAGATAGCAATTGGGTTAGG-GGAAGCTCT 1543
||||||| | |||||||||||||||||||||||| || ||||| || |||||| |
Sbjct 723 AGTATGTATT-ATCATGGGAAGAGAGATTCAAGATAGCTATCGGGTT-GGCGGAAGC-AT 779
Query 1544 T-GATTATCTCCATAACCAATGTTCTAATCCTGTGATCCACAGAGATGTCAAATCTTCAA 1602
| || ||||| ||||||| ||||||||| || ||||| || |||||||||||| |||| |
Sbjct 780 TAGACTATCTTCATAACCGATGTTCTAAGCCAGTGATTCATAGAGATGTCAAAACTTCTA 839
Query 1603 ATGTTCTTCTCTCAGATGAGTTCGAACCTCAGCTTTCGGATTTCGGTCTTTCGATGTGGG 1662
| || ||||| ||| |||| || |||||||||| || ||||| ||||| ||||||||||
Sbjct 840 ACGTCCTTCTATCACTTGAGCTCCAACCTCAGCTGTCAGATTTTGGTCTGTCGATGTGGG 899
Query 1663 GATC-A-AA-GTCTTGTCCATACACGATACAAAGAGATGTGGTGGGGACATTTGGATATC 1719
|| | | || |||| || ||| |||||||| | ||||||||||| |||||||||||||
Sbjct 900 GACCGACAACATCTTCTCGATATTCGATACAAGGTGATGTGGTGGGAACATTTGGATATC 959
Query 1720 TTGCTCCTGAGTACTTTATGTATGGAAAAGTTAGCGATAAAGTTGATGTATATGCCTTTG 1779
|||| || |||||||| |||||||||||||| || |||||||||||||| || |||||||
Sbjct 960 TTGCACCGGAGTACTTCATGTATGGAAAAGTCAGTGATAAAGTTGATGTTTACGCCTTTG 1019
Query 1780 GAGTAGTTTTGCTCGAACTCATTTCAGGAAGAACTCCTATTTCATCTGATAGCCCAAGAG 1839
|||| ||| |||| ||||||||||| ||||||| |||||||||| || | | || ||||
Sbjct 1020 GAGTGGTTCTGCTTGAACTCATTTCTGGAAGAAATCCTATTTCACCTCAGAATCCTAGAG 1079
Query 1840 GACAAGAGAGTTTGGTCATGTGGGCAAAACCAATGATCGAAAAAGGCAATGCAAAAG-AG 1898
|||||||||||||||| ||||||||||| || |||| || | || ||| ||||| |
Sbjct 1080 GACAAGAGAGTTTGGTAATGTGGGCAAAGCCTTTGATTGATACCGGAAATTTAAAAGTA- 1138
Query 1899 CTCTTGGATCCGA-ATATTTCTGGGACT-TTCGATGAGGATCAGTTTCATAAG-ATGGTT 1955
|| |||||||| | | || | | | | ||||| ||| ||||||||| ||| |||||
Sbjct 1139 CTGTTGGATCC-AGACGTTACAGATA-TATTCGACGAGTCTCAGTTTCA-AAGAATGGTA 1195
Query 1956 CTTGCTGCTACACATTGTCTCACAAGAGCAGCCACTTATCGTCCCAATATCAGACAGATA 2015
||||||||| ||||||| ||||||||| ||||||| ||||||||||||| ||||| |||
Sbjct 1196 CTTGCTGCTTCACATTGCCTCACAAGATCAGCCACACATCGTCCCAATATAAGACAAATA 1255
Query 2016 TTGAAGCTGCTAAGAGGCGAAGATGATGTCTCGAAATGGGTGA-AGATAGTAGAA-GAAG 2073
||| ||| ||||||| ||| | || | | ||||||| | | || || |||| |||
Sbjct 1256 CTGAGGCTACTAAGAGATGAAAACGAAGCCGGGAAATGGATTATGGA-AGAAGAAGGAA- 1313
Query 2074 ACGAAGATTGTTTCGACGACGAGGTTTACCCAAATTCGAATACAGAATTACACTTGAGCC 2133
| |||||||| ||||| |||||||||||||| ||||| | |||||||||||||| | ||
Sbjct 1314 ATGAAGATTGCTTCGATGACGAGGTTTACCCGAATTCCAGCACAGAATTACACTTAAACC 1373
Query 2134 TCGCGATGGTCGATGTGGAAGATAATGACTCTGTGTCAATCAGTAGCTTGGAGAGAAGTA 2193
| |||||| | || |||||||| |||| ||| |||||||| ||| ||||||||||||
Sbjct 1374 TTGCGATGCTTGAGGTGGAAGACGATGAAACTGCATCAATCAGCAGCATGGAGAGAAGTA 1433
Query 2194 ACAACAGCCTTTTTTCTTCTTCTTCCTC-TC-AGG-AGCTTCA 2233
|||||||||||||||||||| ||| || || ||| |||||||
Sbjct 1434 ACAACAGCCTTTTTTCTTCTACTTGTTCATCTAGGGAGCTTCA 1476
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116214261675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5