BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480593 Length=2623 Score E Sequences producing significant alignments: (Bits) Value AT2G17110.1 | Symbols: | Protein of unknown function (DUF630 a... 3637 0.0 > AT2G17110.1 | Symbols: | Protein of unknown function (DUF630 and DUF632) | chr2:7442980-7446065 REVERSE LENGTH=2684 Length=2684 Score = 3637 bits (1969), Expect = 0.0 Identities = 2439/2652 (92%), Gaps = 88/2652 (3%) Strand=Plus/Plus Query 34 TTCTGATTCTTCGAATCT-GAAGAAATTTCAAAACTTTTTGATTTTGATGGGTTGTTCAA 92 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 50 TTCTGATTCTTCGAATCTCAAAGAAATTTCAAAACTTTTTGATTTTGATGGGTTGTTCAA 109 Query 93 CCTCAAAGCTCGACGATCTTCCAGCGGTGGCGCTTTGTCGTGACCGTTGTAGCTTCCTTG 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110 CCTCAAAGCTCGACGATCTTCCAGCGGTGGCGCTTTGTCGTGACCGTTGTAGCTTCCTTG 169 Query 153 AAGCAGCGATTCATCAACGTTACGCTTTATCCGAAGCTCACGTATCCTACACACAATCCT 212 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 170 AAGCAGCGATTCATCAACGTTACGCTTTATCAGAAGCTCACGTATCCTACACACAATCCT 229 Query 213 TAAAAGCAATCGCTCACTCTCTTCACCAATTCATCAATCACCACGACCGTAACGACGACG 272 ||||||||||| |||||||||||||||||||||||||||||||| ||||| || | Sbjct 230 TAAAAGCAATCTCTCACTCTCTTCACCAATTCATCAATCACCACCACCGT---TAC-A-- 283 Query 273 ACGATTCGGATTCACCCAAGAAAGCTAAACCCAATATGGATCCTGGGTCGGGTCATCTCG 332 ||||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||| Sbjct 284 ACGATTCCGATTCACCCAAAAAAGCTAAACCCAAGATGGATTCTGGGTCGGGTCATCTCG 343 Query 333 ATTTCGATTCGGATTCTGA---T---GACGATGATGATATTGATTCGTTGCATTCGTCTC 386 ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| Sbjct 344 ATTTCGATTCGGATTCTGACTCTGACGACGATGATGATATTGATTCGTTGCATTCATCTC 403 Query 387 CTCTGCATCATCAT-T--TAGACGATGACTCGAATTCGAAATCGTATTTGCATATGAATT 443 |||| ||||||||| | ||| |||||||||||| |||||||||||||||||||||||| Sbjct 404 CTCTCCATCATCATCTAGAAGATGATGACTCGAATCCGAAATCGTATTTGCATATGAATT 463 Query 444 ATATGAAGAACAGTTCTATGCCTCCTTCTGTGGTTTATGAGCAGAGACCTTCGAGTCCTC 503 |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 464 ATATGAAGAATAGTTATATGCCTCCTTCTTTGGTTTATGAGCAGAGACCTTCGAGTCCTC 523 Query 504 AGAGAGTTTATTTCGGTG----A--ATCATCATCAACCTCTGAGTATTACCATCCATATC 557 |||||||| ||||||||| | ||||||||||||||||||||| || ||||||||| Sbjct 524 AGAGAGTTCATTTCGGTGAATCATCATCATCATCAACCTCTGAGTA-TA--ATCCATATC 580 Query 558 TGAA-T-----T-C-GA--G--ATTGCCTCCGGCGCCACCATCGCCACCGAGGGAAAAGG 605 |||| | | | || | |||||||||| ||||||| ||||| ||||||||||||| Sbjct 581 TGAATTCGAACTACGGATCGAAATTGCCTCCGCCGCCACCGTCGCCGCCGAGGGAAAAGG 640 Query 606 TTTGGGATTTCTTAAACCCTTTTGATACGTATTATACTCCGTACACTCCTAGTCGTGATT 665 |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 641 TTTGGGATTTCTTAGACCCTTTTGATACGTATTATACTCCGTATACTCCTAGTCGTGATA 700 Query 666 CGAGAGAGATAAGAGAGGAATTGGGTGTTCCGGATTTAGAGGATGATGATG-AGGTTGTC 724 |||||||| ||||||| |||||||||||||||||||||||||| ||||||| | ||||| Sbjct 701 CGAGAGAGTTAAGAGATGAATTGGGTGTTCCGGATTTAGAGGAAGATGATGTA-GTTGTT 759 Query 725 AAGGAAGTACATGGGAAACAGAAATTTGTGGCTGCAGTTTCTGTGGAAGAGCCGTTAGGT 784 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 760 AAGGAAGTACATGGGAAACAGAAATTTGTAGCTGCAGTTTCTGTGGAAGAGCCGTTAGGT 819 Query 785 AACTCCGGTGCTAGCACTAGCggaggaggaggaggaggagAAGGTCAGGCTTCTTTGTAT 844 |||||||||||||||||||||||||||||||||||| | | |||| |||||||||||||| Sbjct 820 AACTCCGGTGCTAGCACTAGCGGAGGAGGAGGAGGA-G-G-AGGTAAGGCTTCTTTGTAT 876 Query 845 CAGACTAGGCCAAGTGTGTCAGTTGGGAAAGAAGAAATGGAGCATGAGGTTCATGTTGTG 904 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 877 CAGACTAGGCCAAGTGTGTCAGTTGAGAAAGAAGAAATGGAGCATGAGGTTCATATTGTG 936 Query 905 GAGAAGAAAGTTGTTGAGGATGGTGGAGGTGGGGATGAGGTGCGGAAGAGTAATGCTGCG 964 ||||| ||| ||||||||||| || ||||||||||||||| |||||||||| |||||| Sbjct 937 GAGAAAAAAATTGTTGAGGATAGT---GGTGGGGATGAGGTGAGGAAGAGTAAGGCTGCG 993 Query 965 GTCGCACGTGGTGGTGGCGATGTTC-GGCGTAGGGTGCCTGAGGTTGCGAAAGAGATAGA 1023 || |||||||||||||||| || || | ||| |||| ||||||||||||||||||||||| Sbjct 994 GTGGCACGTGGTGGTGGCGGTG-TCAGACGTGGGGTTCCTGAGGTTGCGAAAGAGATAGA 1052 Query 1024 AGCTCAGTTCTTGAGAGCTGCAGAGTCAGGAAATGAGATTGCAGTGATGCTTGAAGTGGG 1083 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1053 AGCTCAGTTCTTGAGAGCTGCAGAGTCAGGAAATGAGATCGCAGTGATGCTTGAAGTGGG 1112 Query 1084 GAAGCATCCTTATGGTCGCAAACATGTTTCATCGAAGAAGCTGCATGAGGTTAACCCATC 1143 ||| ||||| |||||||||||| ||||||| ||||||||||| |||||| | |||||| Sbjct 1113 GAAACATCCATATGGTCGCAAAAATGTTTCTTCGAAGAAGCTATATGAGGGGACCCCATC 1172 Query 1144 ACCGTCTGTGGTTTCGTCAGCTCAATCATCAACCTCCAAGAAAGCTAAAGCTGAAGCCTC 1203 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1173 ACCGTCTGTGGTTTCGTCAGCTCAATCATCAACCTCCAAAAAAGCTAAAGCTGAAGCCTC 1232 Query 1204 TTCTTCAGTGGCTGCTCCTACTTACGCAGACATTGAGGCAGAGCTTGCTTTAAGGTCTCG 1263 |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct 1233 TTCTTCAGTGACTGCTCCTACTTATGCAGACATTGAGGCAGAGCTTGCTTTAAAGTCTCG 1292 Query 1264 TAATCTTTCTTCGACATTGCACAAGCTCCACCTTTGGGAGAAGAAGCTTTATGACGAAGT 1323 ||||||||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct 1293 TAATCTTTCTTCGACATTGCACAAGCTCCACCTTTGGGAGAAGAAGCTTTACGATGAGGT 1352 Query 1324 CAAGGCTGAGGAAAAACTGCGTGTAAACCACGAGAAAAAGTTAAGGAAGCTGAAGCGTAT 1383 |||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1353 CAAGGCCGAGGAAAAAATGCGTGTAAACCATGAGAAAAAGTTAAGGAAGCTTAAGCGTAT 1412 Query 1384 GGATGAAAGAGGTGTCGAGGATCAAAAAGTAGATTCAACACGAAAATTAGTTAGAAGTAT 1443 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct 1413 GGATGAAAGAGGTGCCGAGAATCAAAAAGTAGATTCAACACGAAAATTAGTTAGAAGTTT 1472 Query 1444 GTCCTCAAAGATAAGGATTGCGATTCAAGTTGTTGACAAAATATCAATTACAATTAACAA 1503 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1473 GTCCACAAAGATAAGGATTGCGATTCAAGTTGTTGACAAAATATCAGTTACAATTAACAA 1532 Query 1504 GATAAGAGACGAAGAGCTATGGCTGCAACTCAATGAATTGATCCAAGGGCTTAGCAAAAT 1563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1533 GATAAGAGACGAAGAGCTATGGCTGCAACTCAATGAATTGATCCAAGGGCTTAGCAAAAT 1592 Query 1564 GTGGAAATCTATGCTCGAGTGCCATCAAAGTCAGTGTGAGGCTATTAAGGAAGCCAGAGG 1623 ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1593 GTGGAAATCCATGCTTGAGTGCCATAAAAGTCAGTGTGAGGCTATTAAGGAAGCCAGAGG 1652 Query 1624 TTTAGGCCCCATTAGAGCGAGTAAAAAACTTGGTGACAATCATCTCGAGGTTTCAAGGAC 1683 |||||||||||||||||| || ||||| |||||| | ||||||||||| ||||||| Sbjct 1653 TTTAGGCCCCATTAGAGCAAGCAAAAATTTTGGTGGGGAGCATCTCGAGGTAACAAGGAC 1712 Query 1684 GCTTGGGCT-TGATCTTATAAATTGGATTGTGGGATTCTCGAGTTGGGTTAGTGCGCAAA 1742 |||| || | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1713 GCTT-GGATATGAACTTATAAATTGGATTGTGGGATTTTCGAGTTGGGTTAGTGCGCAAA 1771 Query 1743 AGGGTTTTGTACGAGAGCTGAATAGTTGGCTTATGAAGTGTCTTTTCTATGAACCTGAGG 1802 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1772 AGGGTTTTGTAAGAGAGCTGAATAGTTGGCTTATGAAGTGTCTTTTCTATGAACCTGAGG 1831 Query 1803 AAACTCCCGATGGAATTGTTCCTTTTTCTCCTAGTCGTATTGGGGCTCCATTGATTTTCG 1862 ||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1832 AAACTCCAGATGGAATCGTTCCTTTTTCTCCTGGTCGTATTGGGGCTCCAATGATTTTCG 1891 Query 1863 TGATCTGTAACCAGTGGGAACAAGCTCTGGATAGAATATCAGAAAAGGAAGTTATCGAGG 1922 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1892 TGATCTGTAACCAGTGGGAACAAGCTCTAGATAGAATATCAGAAAAGGAAGTTATCGAGG 1951 Query 1923 CTATACGCCGTTTCACAACGAGTGTGCTTCATCTTTGGGAACAAGATAGGTTAGCAACCC 1982 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1952 CTATACGCCGTTTCACAACGAGTGTGCTTCATCTTTGGGAACAAGATAGGTTAGCAACCC 2011 Query 1983 GGGATAGGATGATGGGGCATGGTGATCCAAGGAATATGGACCGAGAGGAACTGAGAATCC 2042 |||| ||||| || |||||||||||||| |||||||||||||||||||||| |||||| | Sbjct 2012 GGGAGAGGATTATAGGGCATGGTGATCCTAGGAATATGGACCGAGAGGAACAGAGAATAC 2071 Query 2043 AGAAAGAGATTCAAGAATTGGAAATGAAAATGGTTCTGGTGGGTCC-GGCCGAGGATAAC 2101 |||||||||||||||||||||||||||||||||||||||| ||||| || || |||||| Sbjct 2072 AGAAAGAGATTCAAGAATTGGAAATGAAAATGGTTCTGGTTGGTCCAGG-GGAAGATAAC 2130 Query 2102 ATTGTCTACCAAAGCGACACTAGTAACGAGAGTTTACAGGGTAGTCTTCAACGTATATTT 2161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2131 ATTGTCTACCAAAGCGACACTAGTAACGAGAGTTTACAGGGTAGTCTTCAACGTATATTT 2190 Query 2162 GAAGCTATGGAGAGATTTACAGAGGAATCTGTGAAAGCTTATGTAGATCTCTTGCATCGT 2221 |||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 2191 GAAGCTATGGAGAGGTTTACAGAGGAATCTCTGAAAGCTTATGTAGATCTCTTACATCGT 2250 Query 2222 GCTGAAGAAGATGAATGCGGCTCTCGGGAAACAGATGAAGAAGACTAATGGAAAACCGAG 2281 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 2251 GCTGAAGAAGAAGAATGCGACTCTCGGGAAACAGATGAAGAAGACTAATGGAAAACCGTG 2310 Query 2282 GATGAAAGTATTGCATGACC-AAAAAACTCATCATAGAGTTGTGAGGCTTAAGACAGCTA 2340 || |||||||| |||| ||| |||||||||||| ||||||||||||||||||||||||| Sbjct 2311 GAGGAAAGTATCGCATAACCAAAAAAACTCATC--AGAGTTGTGAGGCTTAAGACAGCTA 2368 Query 2341 A-TTTATGCTTGGCCATGGTTGCATGTTCAGCCATAACTCAGCTCTGCCCGGTCTATAGA 2399 | ||| |||||||||||||||||||| |||||||| |||||||||||| ||| |||||| Sbjct 2369 ATTTTGTGCTTGGCCATGGTTGCATGATCAGCCATTACTCAGCTCTGCGTGGTTTATAGA 2428 Query 2400 CCGGAGTACCAGACCAGA-TT-CATAT-A-T-G-----ACT-GG-TGTT-----TAA--- 2439 |||||||||| | ||||| || |||| | | | | | || ||| ||| Sbjct 2429 CCGGAGTACCGGGCCAGATTTATATATGACTGGTATTTAATGGGAAGTTACACATAATCT 2488 Query 2440 ----T-GGCATGGGCACTAACTGCT-CC-GCGGAGACATTGGATAAAGAGATGGGTC-AA 2491 | |||| |||||||||||||| || ||||||||||||||||||||||||||| || Sbjct 2489 TCCCTAGGCACGGGCACTAACTGCTCCCTCCGGAGACATTGGATAAAGAGATGGGTCAAA 2548 Query 2492 TGCTCGGTTAACGGAAGAAGGTGCTTGCCCTATTGAAGAACTGGGTGTTTAGTTAAATAC 2551 |||||||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct 2549 TGCTCGGTTAACGGAAGAAGGTGCTTGCCCTATTGAAGAACTGGATGGTTAGTTA----C 2604 Query 2552 CCATGGTTGGATAGAAATGTAAGATAATTTGCCACACATAATGCAAGTTACTGGTGTAGC 2611 | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 2605 C-ATGGTTGGATAGAAATGTAAGAGAATTTGCCACACATCATGCAAGTTACTGGTGTAGC 2663 Query 2612 TCAAGCTACGAT 2623 |||||||||||| Sbjct 2664 TCAAGCTACGAT 2675 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 130233384028 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5