BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480601
Length=2156
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17190.1 | Symbols: | ubiquitin family protein | chr2:74778... 3005 0.0
AT2G17200.1 | Symbols: DSK2 | ubiquitin family protein | chr2:7... 1301 0.0
> AT2G17190.1 | Symbols: | ubiquitin family protein | chr2:7477845-7481606
REVERSE LENGTH=2181
Length=2181
Score = 3005 bits (1627), Expect = 0.0
Identities = 1971/2129 (93%), Gaps = 55/2129 (3%)
Strand=Plus/Plus
Query 1 TCATTTAATTGGCCGTTCGGGGCCAACAAATAAGTCCTTTCTCTTTAATTCGCTGCAGTC 60
|||||||||||||||||||||| | ||||||| |||||||||| ||||||
Sbjct 20 TCATTTAATTGGCCGTTCGGGG-C--CAAATAA-------CTCTTTAATTTTCTGCAG-- 67
Query 61 TTCTTCATTTTTTATTCGACCAAAAtttttttATATCCCTTTCCTCACGAAATCTCTAAA 120
|| |||||| |||||||||||||| | |||||||||||||||||| ||||||| | |
Sbjct 68 -TC-TCATTTGTTATTCGACCAAAAATAATTTATATCCCTTTCCTCAAGAAATCT-T-CA 123
Query 121 GAACCGACTTA-GAGCTGGTTCGAGTCTCCTCAAATCTTCTTCTTCGAtttttt-ttCTA 178
||||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||
Sbjct 124 GAACCGACTTATTAG-AGCTTCGAGTCTCCTCAAATCTTCTTCTACGATTTTTTCTTCTA 182
Query 179 GGGTTAGAGATTTTAAGTCTCCGATCGATTTCGCGATTTGTTGAACTAGGATCTGAAATT 238
|| |||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 183 GGTTTAGAGCTTTTGATTCTCCGATCAATTTCGCGATTTGTTGAACTAGGATCTGAAATT 242
Query 239 AGAATGGGTGGTGAAGCAGATTCGAGTCAGCCGCTGACTGCTGAAGGAGAAGCTGTTGCC 298
|||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||
Sbjct 243 AGAATGGGTGGTGAAGCAGATTCGAGGCAGCCGCTGACTGCTGAAGGCGTAGCTGTTGCC 302
Query 299 GTGAACGTCCGGTGTTCCAATGGCTCGAAATTTAGTGTGACGACGAGTCTCGATTCGACG 358
||||||||| | || ||||||||| |||||||||||||||||||||| |||||||| |||
Sbjct 303 GTGAACGTCAGATGCTCCAATGGCACGAAATTTAGTGTGACGACGAGCCTCGATTCCACG 362
Query 359 GTCGAGTCTTTCAAAGAGTTGATTGCGCAGAACAGCGATGTGCCAGCTAATCAGCAGCGT 418
|| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct 363 GTGGAGTCTTTCAAAGAGTTAATTGCGCAGAACAGCGATGTGCCGGCAAATCAGCAGCGT 422
Query 419 TTGATTTACAAGGGACGTATCCTCAAGGACGATCAGACGCTTCTCAGCTATGGTTTGCAG 478
|||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct 423 TTGATTTACAAGGGACGTATCCTCAAAGACGATCAGACTCTCCTCAGCTATGGTTTGCAG 482
Query 479 GCTGATCACACCGTTCATATGGTTCGAGGTTTTGTGCCTTCTTCTCCTTCTGCTCCCGCT 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 GCTGATCACACCGTTCATATGGTTCGAGGTTTTGTGCCTTCTTCTCCTTCTGCTCCCGCT 542
Query 539 GCAAATGCTGGAAACCAAACCACTGCTCCGCAAGCGGTTAGTTCAAATGATACCTCAAAC 598
||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||
Sbjct 543 GCAAATGCTGGAAACCAAACCACTGCTCCTCAAGCGGTTGGTTCAAATGATAGCTCAAAC 602
Query 599 CTCGGAGGAGGGGAGTCTTTGTTCCCTGGGCTTGGATTTAATCCTTTGGGTGGTGGAAAT 658
||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 603 CTCGGAGGAGGTGAATCTTTGTTCCCTGGCCTTGGATTTAATCCTTTGGGTGGTGGAAAT 662
Query 659 GCTATGGCTGGGTTATTTGGATCTGGTCTTCCTGATCTTGAGCAGGCACAGCAACAACTA 718
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 GCTATGGCTGGATTATTTGGATCTGGTCTTCCTGATCTTGAGCAGGCACAGCAACAACTA 722
Query 719 GCTCAAAACCCTAACATGATTAGAGATATGATGAATACTCCAGCCATCCAGAATCTTATG 778
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 723 GCTCAGAACCCTAACATGATTAGAGAGATGATGAATACTCCAGCCATCCAGAATCTTATG 782
Query 779 AACAACCCAGAATTTATGAGGAGTATGATTATGAATAACCCTCAAATGCGTGAGCTTGTG 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 AACAACCCAGAATTTATGAGGAGTATGATTATGAATAACCCTCAAATGCGTGAGCTTGTA 842
Query 839 GATCGCAATCCTGAGCTTGGTCATGTGCTCAATGACCCAAGCATCCTTCGTCAAACTCTA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 GATCGCAATCCTGAGCTTGGTCATGTGCTCAATGACCCAAGCATCCTTCGTCAAACTCTA 902
Query 899 GAAGCGGCAAGAAACCCAGAGCTTATGCGTGAAATGATGCGGAATACCGATAGGGCTATG 958
|||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct 903 GAAGCGGCGAGAAACCCAGAGCTTATGCGTGAAATGATGAGAAATACTGATAGGGCTATG 962
Query 959 AGTAATATTGAGTCTATGCCTGAGGGATTTAACATGCTTAGGCGTATGTATGAAAATGTT 1018
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGTAATATTGAGTCTATGCCTGAGGGATTTAACATGCTTAGGCGTATGTATGAAAATGTC 1022
Query 1019 CAAGAACCGTTAATGAATGCTACCACTATGTCCGGGAATGCTGGAAGCAATAC-AGGCTC 1077
|| ||||||||||||||||||||||||||||||| ||||||||||| |||||| || |||
Sbjct 1023 CAGGAACCGTTAATGAATGCTACCACTATGTCCGAGAATGCTGGAAACAATACGAG-CTC 1081
Query 1078 TAATCCATTTGCTGCTCTTCTGGGAAACCAGGGGGTCACTACACAAGGAAGCGACGTCT- 1136
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1082 TAATCCATTTGCTGCTCTTCTGGGAAACCAGGGGGTTACTACACAAGGAAGCGATA-CTT 1140
Query 1137 CTAATAATACTTCGACACCGAATGCTGAAACGGGTACACCTAATGCAAATCCACTTCCTA 1196
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 CTAATAATATTTCGGCACCGAATGCTGAAACGGGTACACCTAATGCAAATCCACTTCCTA 1200
Query 1197 ATCCATGGGGTGCTACGGCTGGCCAAACAACTGCCCCTGGAAGGACAAATGCTGG--T-G 1253
|||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| | |
Sbjct 1201 ATCCTTGGGGTGCCACGGCTGGCCAGACAACTGCCCCTGGAAGGACAAATGCTGGACTTG 1260
Query 1254 GTGGACTTGGTGGTCTTGGTGGCCTTGCTGGTCTTGGTATGCTGGGAGCAGACTCACCTC 1313
|||| |||||||| ||||| ||||||| ||| || |||||||||||||| ||||||||||
Sbjct 1261 GTGGTCTTGGTGGGCTTGGAGGCCTTGGTGGACTCGGTATGCTGGGAGCGGACTCACCTC 1320
Query 1314 TTGGTGCGACTCCAGATGCTTCTCAGTTGAGCCAAATACTGCAAAACCCAGCTATGTCGC 1373
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1321 TTGGTGCGACTCCAGATGCTTCTCAATTGAGCCAAATACTGCAAAACCCCGCTATGTCGC 1380
Query 1374 AGATGATGCAAAGTGTACTTTCCAATCCACAATACATGAATCAGCTTATGAGTCTCAACC 1433
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1381 AGATGATGCAAAGCGTACTTTCCAATCCACAGTACATGAATCAGCTTATGAGTCTTAACC 1440
Query 1434 CGCAACTCCGAAGCATGCTAGATATGAATCCTCAGTTGAGGGAAATGATGCAGAACCCTG 1493
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CACAACTCCGAAGCATGCTAGATATGAATCCTCAGTTGAGGGAAATGATGCAGAACCCTG 1500
Query 1494 AATTCCTTCGCCAGTTTAGCTCTCCAGAGATGATGCAGCAAATGATGTCTCTACAACAAT 1553
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1501 ATTTCCTTCGCCAGTTTAGCTCTCCCGAGATGATGCAGCAAATGATGTCTCTACAACAAT 1560
Query 1554 CACTTTTCTCTCAGAATAGGAACACGGTTGGCCAGGATCCAACGCAAACTGGTGCTGCGA 1613
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 1561 CACTTTTCTCTCAGAATAGGAACACGGCTGGCCAGGATCCTACGCAAACTGGTGCTGCGA 1620
Query 1614 CAGGGACAGCCAATAACGGAGGGCTGGATTTATTGATGAATATGTTTGGCAGTCTTGGTG 1673
|||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||
Sbjct 1621 CAGGGACAGCCAATAACGGAGGACTAGATTTATTGATGAATATGTTTGGCAGCCTTGGTG 1680
Query 1674 CTGGCGGCCTGAGTGGCACAAACCAACCCAATGTTCCTCCTGAAGAGCGATATGCGACTC 1733
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1681 CTGGCGGCCTAAGTGGCACAAACCAACCCAATGTTCCTCCTGAAGAGCGATTTGCGACTC 1740
Query 1734 AGTTGCAGCAGTTGCAAGAAATGGGATTCTACGACAGAGCAGAGAACATAAGAGCGTTGC 1793
||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1741 AGTTGCAACAGTTGCAAGAAATGGGATTCTACGACAGAGCAGAGAACATAAGGGCTTTGC 1800
Query 1794 TTGCAACTAATGGCAATGTTAACGCTGCTGTAGAACGACTCTTGGGGAGTATTGGCCAGT 1853
||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 TTGCAACCAATGGTAACGTTAACGCTGCTGTAGAACGACTCTTGGGGAGTATTGGCCAGT 1860
Query 1854 AGCATACAGGATCGTGAACTTGTGGATAGAAAAGCTGCGCATGGATACAGTATTTGTTTT 1913
| |||||||||||| |||||||||||||||||||| || ||| |||||| ||||||||||
Sbjct 1861 AACATACAGGATCGCGAACTTGTGGATAGAAAAGCCGCTCATCGATACACTATTTGTTTT 1920
Query 1914 TAGTGGCCATCTTCttt--t-ttt------t----ACA---T-----AC-T--TT-GGGT 1948
| ||| |||||||||| | ||| | ||| | || | || ||||
Sbjct 1921 CAATGGTCATCTTCTTTCCTCTTTACCCAATCCCCACAACCTTTTTTACATACTTTGGGT 1980
Query 1949 CGTCTGTTATCTTTCAGATTCTATTTGAAGTTGTTACAACGTACATCTGTAGAAGTTGAT 2008
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1981 CGTCTGTTATCTTTCAGATTCTATTTGAAGTTGTTACCTCGTACATCTGTAGAAGTTGAT 2040
Query 2009 TTCGAAATGTGGAATGGTTACATTTACGTTATCTTTTCTCCATTT-ATCTTAT-AAATAT 2066
|||||||||||||||||||||||||||||| |||| ||||||||| | ||||| ||||||
Sbjct 2041 TTCGAAATGTGGAATGGTTACATTTACGTTTTCTTATCTCCATTTTA-CTTATTAAATAT 2099
Query 2067 AGCCGTTGTATACGTTGATAATTTGTGAT 2095
||| || || ||||||||||||||||||
Sbjct 2100 AGCTGTAGTG-ACGTTGATAATTTGTGAT 2127
> AT2G17200.1 | Symbols: DSK2 | ubiquitin family protein | chr2:7481881-7485240
REVERSE LENGTH=2058
Length=2058
Score = 1301 bits (704), Expect = 0.0
Identities = 1069/1236 (86%), Gaps = 61/1236 (5%)
Strand=Plus/Plus
Query 95 ATCCCTTTCCTCACGAAATCTCTAAAGAACCGACTTAGAGCTGGTTCGAGTCTCCTCAAA 154
|||| |||| ||| | || |||| ||||||||| |||||| || |||||| || |||
Sbjct 9 ATCCATTTCGTCAAGCAA--TCTACCGAACCGACTCAGAGCT--TTTGAGTCTTCT-AAA 63
Query 155 TCTTCTTCTTCGAttttttttCTAGGGTTAGAGAT-TTTA-AG-TCTCCGATCGATTTC- 210
|| || | |||| ||||||||||||||| | | | | | | | || ||| ||
Sbjct 64 TC-TC-T-ATCGA--ATTTTTCTAGGGTTAGGGCTCCTGATCGAT-TTCG--CGAGCTCT 115
Query 211 GCGATT-TGTT--GAACTAGGATCTGAAATTAG-AATGGGTGGTGAAGCAGATTCGAGTC 266
|||||| | || | | ||||||| |||||||| ||||||||| || | |||||| ||||
Sbjct 116 GCGATTATTTTAAGTATTAGGATCCGAAATTAGAAATGGGTGGAGAGGGAGATTCAAGTC 175
Query 267 AGCCGCTGACTGCTGAAGGAGAAGCTGTTGCCGTGAACGTCCGGTGTTCCAATGGCTCGA 326
|||||| || || ||||||||||||||| || |||||| || |||| || |||||| |||
Sbjct 176 AGCCGCAGAGTGGTGAAGGAGAAGCTGTGGCTGTGAACATCAGGTGCTCTAATGGCACGA 235
Query 327 AATTTAGTGTGACGACGAGTCTCGATTCGACGGTCGAGTCTTTCAAAGAGTTGATTGCGC 386
|||||||||||| ||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct 236 AATTTAGTGTGAAGACGAGTCTCGATTCAACGGTGGAGTCTTTCAAAGAGTTGGTGGCTC 295
Query 387 AGAACAGCGATGTGCCAGCTAATCAGCAGCGTTTGATTTACAAGGGACGTATCCTCAAGG 446
||| ||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 296 AGAGCAGCGATGTTCCAGCTAATCAGCAGCGCTTGATTTACAAGGGTCGTATCCTCAAGG 355
Query 447 ACGATCAGACGCTTCTCAGCTATGGTTTGCAGGCTGATCACACCGTTCATATGGTTCGAG 506
||||||| || || |||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 356 ACGATCAAACTCTCCTCAGCTATGGTTTGCAGGCTGATCACACCATTCATATGGTTAGAG 415
Query 507 GTTTTGTGCCTTCTT------CTCCTTCTGCTCCCGCTGCAAATGCTGGAAACCA---AA 557
| | || ||||||| | ||| ||||||| || || || || |||||| |
Sbjct 416 GCTCTGCACCTTCTTCAGCACCACCTCCTGCTCCGGCCGC-AA-GC--CAAACCACTGCA 471
Query 558 CC-ACTGCTCCGCAAGCGGTTAGTTCAAATGATACCTCAAACCT---CGGAG-GA----- 607
|| | || | | | || |||| ||||| || ||| ||| || || |||| ||
Sbjct 472 CCTAGTGTTACTCGAGGGGTTGGTTCAGATAATAGCTCGAATCTAGGAGGAGCGAGTCCT 531
Query 608 GGGGAGTCTTTGTTCCCTGGGCTTGGATTTAATCCTTTGGGTGGTGGAAATGCTATGGCT 667
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 532 GGGGAATCTTTGTTCCCTGGGCTTGGATTTAATCCTCTGGGTGGTGGAAATGCTATGTCT 591
Query 668 GGGTTATTTGGATCTGGTCTTCCTGATCTTGAGCAGGCACAGCAACAACTAGCTCAAAAC 727
|||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct 592 GGGTTATTTGGAGCTGGTCTTCCGGATCTTGTGCAGACACAGCAACAACTAGCTCAAAAC 651
Query 728 CCTAACATGATTAGAGATATGATGAATACTCCAGCCATCCAGAATCTTATGAACAACCCA 787
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 652 CCTAACATGATTAGAGATATGATGAATACTCCAGCCATCCAGAACCTTATGAACAACCCA 711
Query 788 GAATTTATGAGGAGTATGATTATGAATAACCCTCAAATGCGTGAGCTTGTGGATCGCAAT 847
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 712 GAGTTTATGAGGAGTATGATTATGAATAACCCTCAAATGCGTGAGCTTGTAGATCGCAAT 771
Query 848 CCTGAGCTTGGTCATGTGCTCAATGACCCAAGCATCCTTCGTCAAACTCTAGAAGCGGCA 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 CCTGAGCTTGGTCATGTGCTCAATGACCCAAGCATCCTTCGTCAAACTCTAGAAGCGGCA 831
Query 908 AGAAACCCAGAGCTTATGCGTGAAATGATGCGGAATACCGATAGGGCTATGAGTAATATT 967
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 832 AGAAACCCAGAGCTTATGCGTGAAATGATGCGGAATACTGATAGGGCTATGAGTAATATT 891
Query 968 GAGTCTATGCCTGAGGGATTTAACATGCTTAGGCGTATGTATGAAAATGTTCAAGAACCG 1027
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 892 GAGTCTATGCCTGAGGGATTTAACATGCTTAGGCGTATGTATGAAAATGTCCAGGAACCG 951
Query 1028 TTAATGAATGCTACCACTATGTCCGGGAATGCTGGAAGCAATACAGGCTCTAATCCATTT 1087
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 952 TTAATGAATGCTACCACTATGTCCGGGAATGCTGGAAACAATACAGGCTCCAATCCATTT 1011
Query 1088 GCTGCTCT-TCTGGGAAACCAGGGGGTCACTACACAAGGAAGCGACGTCT-CTAATAATA 1145
|||||||| | |||||||||||||||||||||| |||||||| || | || ||||||||
Sbjct 1012 GCTGCTCTGT-TGGGAAACCAGGGGGTCACTACGCAAGGAAGTGATG-CTTCTAATAATT 1069
Query 1146 CTTCGACACCGAATGCTGAAACGGGTAC-A--CCTAATGCAAATCCACTTCCTAATCCAT 1202
|||||||||| ||||||| |||||| || | || ||||||||||||||||||||||| |
Sbjct 1070 CTTCGACACCAAATGCTGGAACGGGGACTATTCCGAATGCAAATCCACTTCCTAATCCTT 1129
Query 1203 GGGGTGCTAC-GGCTGGCCAAACAACTGCCCCTGGAAGGACAAATGCTGGTGGTGGA--C 1259
|||||||||| || ||| || ||||||||||||||||||||||||| |||||| ||| |
Sbjct 1130 GGGGTGCTACAGG-TGGTCAGACAACTGCCCCTGGAAGGACAAATGTTGGTGG-GGATGC 1187
Query 1260 TTGG-----TGGTCTTGGTGGCCTTGCTGGTCTTGG 1290
|| ||| ||||||||||||| |||||||||
Sbjct 1188 GAGGAGCCCTGGACTTGGTGGCCTTGGTGGTCTTGG 1223
Score = 752 bits (407), Expect = 0.0
Identities = 553/623 (89%), Gaps = 11/623 (2%)
Strand=Plus/Plus
Query 1252 TGGTGGACTTGGTGGTCTTGGTGGCCTTGCTGGTCTTGGTATGCTGGGAGCAGACTCACC 1311
|||||| ||||| | ||||| ||||||| ||| || |||||||| ||||| || |||||
Sbjct 1212 TGGTGGTCTTGGAAGCCTTGGAGGCCTTGGTGGACTCGGTATGCTTGGAGCGGATTCACC 1271
Query 1312 TCTTGGTGCGACTCCAGATGCTTCTCAGTTGAGCCAAATACTGCAAAACCCAGCTATGTC 1371
||||||||||||||||||||||||||| |||||||| || ||||||||||||| || ||
Sbjct 1272 TCTTGGTGCGACTCCAGATGCTTCTCAATTGAGCCAGTTATTGCAAAACCCAGCCATATC 1331
Query 1372 GCAGATGATGCAAAGTGTACTTTCCAATCCACAATACATGAATCAGCTTATGAGTCTCAA 1431
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1332 GCAGATGATGCAAAGCGTATTTTCCAATCCACAATACATGAATCAGCTTATGAGTCTTAA 1391
Query 1432 CCCGCAACTCCGAAGCATGCTAGATAT-GAATCCTCAGTTGAGGGAAATGATGCAGAACC 1490
||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1392 CCCACAACTCCGAAGCATGCTAGAT-TCGAATCCTCAGTTGAGGGAAATGATGCAGAACC 1450
Query 1491 CTGAATTCCTTCGCCAGTTTAGCTCTCCAGAGATGATGCAGCAAATGATGTCTCTACAAC 1550
| || |||||||| |||||||| ||||| ||||||||||||||||||||| ||||||| |
Sbjct 1451 CAGATTTCCTTCGTCAGTTTAGTTCTCCGGAGATGATGCAGCAAATGATGACTCTACAGC 1510
Query 1551 AATCACTTTTCTCTCAGAATAGGAACACGGTTGGCCAGGATCCAACGCAAACTGGTGCTG 1610
|||||| | ||||||||||| || || | |||||||| | ||||||||||||||
Sbjct 1511 AATCAC---TATCTCAGAATAGAAATACAGCCAGCCAGGATGCGGGGCAAACTGGTGCTG 1567
Query 1611 CGACAGGGACAGCCAATAACGGAGGGCTGGATTTATTGATGAATATGTTTGGCAGTCTTG 1670
| ||| || | |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1568 CCACA-GG--A---AATAACGGGGGGCTGGATTTATTGATGAATATGTTTGGCAGTCTTG 1621
Query 1671 GTGCTGGCGGCCTGAGTGGCACAAACCAACCCAATGTTCCTCCTGAAGAGCGATATGCGA 1730
|||||||||||||||||||||| |||||| |||||||||||||||||||||| || || |
Sbjct 1622 GTGCTGGCGGCCTGAGTGGCACGAACCAATCCAATGTTCCTCCTGAAGAGCGGTACGCTA 1681
Query 1731 CTCAGTTGCAGCAGTTGCAAGAAATGGGATTCTACGACAGAGCAGAGAACATAAGAGCGT 1790
|||| ||||| |||||||| |||||||||||||| ||||||||||||||||| || ||||
Sbjct 1682 CTCAATTGCAACAGTTGCAGGAAATGGGATTCTATGACAGAGCAGAGAACATTAGGGCGT 1741
Query 1791 TGCTTGCAACTAATGGCAATGTTAACGCTGCTGTAGAACGACTCTTGGGGAGTATTGGCC 1850
|||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || |
Sbjct 1742 TGCTTGCAACCAATGGTAACGTTAACGCTGCTGTAGAACGACTCTTGGGGAGTATCGGAC 1801
Query 1851 AGTAGCATACAGGATCGTGAACT 1873
||||||||||||| || ||||||
Sbjct 1802 AGTAGCATACAGGTTCATGAACT 1824
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106927160850
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5