BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480618
Length=1268
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17340.1 | Symbols: | Uncharacterised conserved protein (UC... 1993 0.0
AT2G17320.1 | Symbols: | Uncharacterised conserved protein (UC... 1524 0.0
AT4G35360.1 | Symbols: | Uncharacterised conserved protein (UC... 1251 0.0
> AT2G17340.1 | Symbols: | Uncharacterised conserved protein (UCP030210)
| chr2:7541406-7544128 REVERSE LENGTH=1352
Length=1352
Score = 1993 bits (1079), Expect = 0.0
Identities = 1198/1254 (96%), Gaps = 14/1254 (1%)
Strand=Plus/Plus
Query 1 TCATTTCTGAAGATCATCACAAGCTAAGAAAATGGAGAGCGATTCAGAGATGGTTCCGTT 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 9 TCATTTCTGAAGATCATCACAAGCAAAGAAAATGGAGAGCGATTCAGAGATGGTTCCGTT 68
Query 61 TCCTCAATTACCGACGCCGATAGAAACCAACTACAGAGCTTGCACCATTCCTTACAGATT 120
||||||| |||||| ||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct 69 TCCTCAACTACCGATGCCAATAGAAAACAACTACAGAGCTTGCACAATTCCTTACAGATT 128
Query 121 CCCTTCTGATGATCCCAAGAAAGCTACTCCTACTGAAATCTCGTGGATCAACGTCTTCGC 180
||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct 129 TCCTTCTGATGATCCCAAGAAAGCCACTCCAAATGAAATCTCGTGGATCAACGTCTTCGC 188
Query 181 CAATTCCATTCCTTCTTTCAAGAAACGTGCAGAGAGCGATA-CAACGGTTCCAGATGCTC 239
||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||
Sbjct 189 CAATTCCATTCCTTCTTTCAAGAAACGTGCAGAGAGCGATATC-ACTGTTCCAGATGCTC 247
Query 240 CTGCTAGAGCTGAAAATTTTGCAGAAAGATATGC-GGGAATTCTTGAAGACTTGAAGAAA 298
|||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 248 CTGCTAGAGCTGAAAAATTTGCAGAAAGATATGCTGGG-ATTCTTGAAGACTTGAAGAAA 306
Query 299 GATCCAGAGAGTCATGGCGGGCCACCAGATGGTATTCTTCTATGCCGACTTCGTGAGCAA 358
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 307 GATCCAGAGAGTCATGGCGGACCACCAGATGGCATTCTTCTATGCCGACTTCGTGAGCAA 366
Query 359 GTACTCAGAGAATTAGGATTTAGGGACATATTCAAGAAAGTGAAGGATGAGGAGAATGCA 418
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 367 GTACTCAGAGAGTTAGGATTTAGGGACATATTCAAGAAAGTTAAGGATGAGGAGAATGCA 426
Query 419 AAGGCTATATCACTATTTCCTGAAGTTGTCAGTCTGAGTGATGCTATTGAAGATGACGGA 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 427 AAGGCTATATCACTATTTCCTCAAGTTGTCAGTCTGAGTGATGCTATTGAAGATGACGGA 486
Query 479 AAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGGAAACATCTTTGATCTGGGTTCT 538
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 487 AAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGGAAACATCTTTGATCTTGGTTCT 546
Query 539 GCACAGCTTGCTGAAGTTTTCTCAAGGGATGGTATGTCTTTCTTGGCTAGCTGTCAAAAT 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 GCACAGCTTGCTGAAGTTTTCTCAAGGGATGGTATGTCTTTCTTGGCTAGCTGTCAAAAC 606
Query 599 TTGGTTCCACGACCATGGGTCATTGATGACTTGGAAAACTTCCAAGCCAAATGGATCAAC 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 TTGGTTCCACGACCATGGGTCATTGATGACTTGGAAAACTTCCAAGCCAAATGGATCAAT 666
Query 659 AAGTCTTGGAAGAAGGCAGTGATTTTTGTTGATAATTCTGGTGCAGACATAATTTTGGGT 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGTCTTGGAAGAAGGCAGTGATTTTTGTTGATAATTCTGGTGCAGACATAATTTTGGGT 726
Query 719 ATTTTGCCGTTTGCAAGAGAGTTGCTCCGTCGAGGAACTCAGGTTGTGCTGGCTGCTAAT 778
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 727 ATTTTGCCGTTTGCAAGAGAGTTGCTCCGTCGAGGAGCTCAGGTGGTGCTGGCTGCTAAT 786
Query 779 GAACTGCCATCTATCAATGACATAACATATACCGAGCTTACAGAGATCTTGACACAGTTG 838
|| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||
Sbjct 787 GAGCTGCCATCTATCAATGACATAACATGTACCGAGCTTACAGAAATCTTGTCACAGTTG 846
Query 839 AAGGATGAAAATGGCCAATTGCTAGGCGTTGATACTTCGAAGCTTCTGATTGCAAATTCG 898
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 847 AAGGATGAAAATGGCCAATTGCTAGGTGTTGATACTTCGAAGCTTCTGATTGCAAATTCG 906
Query 899 GGGAATGACTTACCAGTTATCGATCTCTCAAGAGTATCACAGGAGCTTGCTTATCTTTCA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 907 GGGAATGACTTACCAGTTATCGATCTCTCAAGAGTATCACAGGAGCTTGCTTACCTTTCA 966
Query 959 TCTGATGCCGACTTAGTCATCGTAGAAGGCATGGGTCGTGGAATTGAGACAAACCTTTAT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 TCTGATGCCGACTTAGTCATCGTAGAAGGCATGGGTCGTGGAATTGAGACAAACCTTTAT 1026
Query 1019 GCTCAGTTCAAGTGTGATTCTCTGAAGATTGGAATGGTGAAGCATCTTGAAGTAGCAGAG 1078
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1027 GCTCAGTTCAAGTGTGATTCTCTCAAGATTGGAATGGTGAAGCATCTTGAAGTAGCAGAG 1086
Query 1079 TTTCTCGGAGGACGACTTTATGACTGTGTTTTCAAATACAATGAAGTTCAGAGCTAATTA 1138
|||||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 1087 TTTCTCGGAGGACGGCTCTATGACTGTGTCTTCAAATTCAATGAAGTTCAGAGCTAATTA 1146
Query 1139 -TATTTCAGTAATCTTCAGTCTCACTTCTCCCCTACTGTGATTTTTTATTCAAAACATAG 1197
|||||||||| ||| |||||||||||||| | |||||| |||||| |||||||||||||
Sbjct 1147 GTATTTCAGTACTCTCCAGTCTCACTTCTCTCTTACTGTCATTTTTAATTCAAAACATAG 1206
Query 1198 GATACAAAGAGTAATACTTTATGCTCCTTTCCATCTTGATATGGTAATTCAATT 1251
| |||||| ||||||| ||| | ||| ||||||||||||||| ||||||
Sbjct 1207 GGTACAAAAAGTAATA-TTT-T--TCC-----ATCTTGATATGGTAAATCAATT 1251
> AT2G17320.1 | Symbols: | Uncharacterised conserved protein (UCP030210)
| chr2:7533480-7535942 REVERSE LENGTH=1209
Length=1209
Score = 1524 bits (825), Expect = 0.0
Identities = 1017/1110 (92%), Gaps = 12/1110 (1%)
Strand=Plus/Plus
Query 42 ATTCAGAGATGGTTCCGTTTCCTCAATTACCGACGCCGATAGAAACCAACTACAGAGCTT 101
|||| |||||| |||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 59 ATTCGGAGATGATTCCGTTTCCTCTGTTACCAACGCCGATTGAAACCAACTACAGAGCTT 118
Query 102 GCACCATTCCTTACAGATTCCCTTCTGATGATCCCAAGAAAGCTACTCCTACTGAAATCT 161
||||||||||||| ||||||||||| ||| ||| ||||||||| ||||||||||||||||
Sbjct 119 GCACCATTCCTTATAGATTCCCTTCCGATAATCTCAAGAAAGCCACTCCTACTGAAATCT 178
Query 162 CGTGGATCAACGTCTTCGCCAATTCCATTCCTTCTTTCAAGAAACGTGCAGAGAGCGATA 221
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 CCTGGATCAACGTCTTCGCCAATTCCATTCCTTCTTTCAAGAAACGTGCAGAGAGCGATA 238
Query 222 CAACG-GTTCCAGATGCTCCTGCTAGAGCTGAAAA-TTTTGCAGAAAGATATGCGGGAAT 279
| | | |||||||||||||||||||||||| |||| ||||| | |||||||||||||| |
Sbjct 239 CCA-GTGTTCCAGATGCTCCTGCTAGAGCT-AAAATTTTTGAACAAAGATATGCGGGATT 296
Query 280 TCTTGAAGACTTGAAGAAAGATCCAGAGAGTCATGGCGGGCCACCAGATGGTATTCTTCT 339
|||||||| || ||||||||||||||||||| |||| ||||||||||||||| || ||||
Sbjct 297 TCTTGAAGGCTGGAAGAAAGATCCAGAGAGTAATGGTGGGCCACCAGATGGTGTTATTCT 356
Query 340 ATGCCGACTTCGTGAGCAAGTACTCAGAGAATTAGGATTTAGGGACATATTCAAGAAAGT 399
||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 357 CGGCCGAGTTCGTGAGCATTTACTCAGAGAGTTAGGATTTAGGGACATATTCAAGAAAGT 416
Query 400 GAAGGATGAGGAGAATGCAAAGGCTATATCACTATTTCCTGAAGTTGTCAGTCTGAGTGA 459
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 CAAGGATGAGGAGAATGCAAAGGCTATATCACTATTTCCTGAAGTTGTCAGTCTGAGTGA 476
Query 460 TGCTATTGAAGATGACGGAAAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGGAAA 519
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 477 TGCTATTGAAGATGACGGAGAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGGAAA 536
Query 520 CATCTTTGATCTGGGTTCTGCACAGCTTGCTGAAGTTTTCTCAAGGGATGGTATGTCTTT 579
|||||||||||| |||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct 537 CATCTTTGATCTTGGTTCTGCACAGCTTGCTGAGGTTTTCTCAAGGGATGGCATATCTTT 596
Query 580 CTTGGCTAGCTGTCAAAATTTGGTTCCACGACCATGGGTCATTGATGACTTGGAA-AACT 638
|||||||| || |||||| ||||||||||||||||||||||| ||||||||| || || |
Sbjct 597 CTTGGCTACCTCTCAAAACTTGGTTCCACGACCATGGGTCATCGATGACTTG-AACAAGT 655
Query 639 TCCAAGCCAAATGGATCAACAAGTCTTGGAAGAAGGCAGTGATTTTTGTTGATAATTCTG 698
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 656 TCCAAGCCAAATGGGTCAAGAAGCCTTGGAAGAAGGCAGTGATTTTTGTTGATAATTCTG 715
Query 699 GTGCAGACATAATTTTGGGTATTTTGCCGTTT-GCAAGAGAGTTGCTCCGTCGAGGAACT 757
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
Sbjct 716 GTGCAGACATAATTTTGGGTATTTTGCC-TTTCGCAAGAGAGTTGCTCCGTCGAGGAATT 774
Query 758 CAGGTTGTGCTGGCTGCTAATGAACTGCCATCTATCAATGACATAACATATACCGAGCTT 817
||||| ||||| |||||||| || |||||| ||||||| || |||||||||| ||||||
Sbjct 775 CAGGTGGTGCTAGCTGCTAACGAGCTGCCAGCTATCAACGATGTAACATATACTGAGCTT 834
Query 818 ACAGAGATCTTGACACAGTTGAAGGATGAAAATGGCCAATTGCTAGGCGTTGATACTTCG 877
||||| ||| || | ||||| ||||||| ||||||||||||| ||||||||||||||||
Sbjct 835 ACAGATATCGTGTCGCAGTTAAAGGATGGAAATGGCCAATTGATAGGCGTTGATACTTCA 894
Query 878 AAGCTTCTGATTGCAAATTCGGGGAATGACTTACCAGTTATCGATCTCTCAAGAGTATCA 937
|||||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||
Sbjct 895 AAGCTTCTGATTGCAAATTCAGGGAACGATTTAGCGGTTATTGATCTCTCAAGAGTATCG 954
Query 938 CAGGAGCTTGCTTATCTTTCATCTGATGCCGACTTAGTCATCGTAGAAGGCATGGGTCGT 997
|| ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 955 CACGAGCTTGCTTACCTTTCATCTGATGCAGACTTAGTCATCCTAGAAGGCATGGGTCGC 1014
Query 998 GGAATTGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTGAAGATTGGAATGGTG 1057
|| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 1015 GGGATCGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTCAAGATCGGAATGGTG 1074
Query 1058 AAGCATC-TTGAAGTAGCAGAGTTTCTCGGAGGACGACTTTATGACTGTGT-TTTCAAAT 1115
||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| ||||
Sbjct 1075 AAGCA-CGTTGAAGTAGCACAGTTTCTCGGAGGACGACTTTACGACTGTGTCTTT-AAAT 1132
Query 1116 ACAATGAAGTTCAGAGCTAATTATATTTCA 1145
||||||||||||||| |||||| ||||||
Sbjct 1133 TCAATGAAGTTCAGAGTTAATTACATTTCA 1162
> AT4G35360.1 | Symbols: | Uncharacterised conserved protein (UCP030210)
| chr4:16812116-16814745 REVERSE LENGTH=1380
Length=1380
Score = 1251 bits (677), Expect = 0.0
Identities = 984/1131 (87%), Gaps = 25/1131 (2%)
Strand=Plus/Plus
Query 28 GAA-AATGGAGAGCGATTCAGAGATGGTTCCGTTTCCTCAATTACCGACGCCGATAGAAA 86
||| |||||||||||| || |||||||| |||| |||| |||||||| |||||||||
Sbjct 85 GAAGAATGGAGAGCGACTCCGAGATGGTAGCGTTGCCTCTGTTACCGACTCCGATAGAAT 144
Query 87 CCAACTACAGAGCTTGCACCATTCCTTA-CAGATTCCCTTCTGATGATCCCAAGAAA-GC 144
| |||||||| ||||||||||||||||| | |||||||||||||| || || ||||| ||
Sbjct 145 CGAACTACAGGGCTTGCACCATTCCTTATC-GATTCCCTTCTGATAAT-CCTAGAAAGGC 202
Query 145 TACTCCTACTGAAATCTCGTGGATC-AACGTCTTCGCCAATTCCATTCCTTCTTTCAAGA 203
|||||| ||||| ||||| |||||| | | ||||| |||||||||| ||||||||||||
Sbjct 203 TACTCCCACTGAGATCTCCTGGATCGATC-TCTTCTCCAATTCCATCCCTTCTTTCAAGG 261
Query 204 AACGTGCAGAGAGCGATACAACGGTTCCAGATGCTCCTGCTAGAGCTGAAAATTTTG-CA 262
|||||||||||||||||||||| |||||||||||||||| | |||||||||| |||| ||
Sbjct 262 AACGTGCAGAGAGCGATACAACCGTTCCAGATGCTCCTGTTCGAGCTGAAAAGTTTGCCA 321
Query 263 GAAAGATATGCGGGA-ATTCTTGAAGACTTGAAGAAAGATCCAGAGAGTCATGGCGGGCC 321
|||| ||||| ||| |||||||| ||| ||||||||||||| ||||| ||||| || ||
Sbjct 322 -AAAGGTATGC-GGAGATTCTTGAGGACCTGAAGAAAGATCCGGAGAGCCATGGTGGTCC 379
Query 322 ACCAGATGGTATTCTTCTATGCCGACTTCGTGAGCAAG-TACTCAGAGAATTAGGATTTA 380
||| ||| | |||||||| ||| || ||||||||| | |||| |||||||| |||||||
Sbjct 380 ACCGGATTGCATTCTTCTCTGCAGAATTCGTGAGC-TGATACTAAGAGAATTGGGATTTA 438
Query 381 GGGACATATTCAAGAAAGTGAAGGATGAGGAGAATGCAAAGGCTATATCACTATTTCCTG 440
|||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 439 GGGACATATTTAAGAAAGTTAAGGATGAGGAGAATGCAAAGGCAATATCACTATTTCCTG 498
Query 441 AAGTTGTCAGTCTGAGTGATGCTATTGAA-GATGACGGAAAACGGTTAGAGAATTTGGTG 499
|||||||| || |||||||||||||| || ||||| || || || |||||||| ||||
Sbjct 499 AAGTTGTCCGTTTGAGTGATGCTATT-AACGATGAAGGCAAGCGCATAGAGAATCTGGTC 557
Query 500 AGAGGGATATTTGCTGGAAACATCTTTGATCTGGGTTCTGCACAGCTTGCTGAAGTTTTC 559
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 558 AGAGGGATATTTGCTGGAAACATCTTTGATCTGGGTTCTGCACAGCTTGCTGAGGTTTTC 617
Query 560 TCAAGGGATGGTATGTC-TTTCTTGGCTAGCTGTCAAAATTTGGTTCCACGACCATGGGT 618
|||| || || ||||| ||| |||||||||||||| || |||||| |||||||||||||
Sbjct 618 TCAAAAGACGGCATGTCCTTT-TTGGCTAGCTGTCAGAACTTGGTTTCACGACCATGGGT 676
Query 619 CATTGATGACTTGGAAAACTTCCAAGCCAAATGGATCAACAAGTCTTGGAAGAAGGCAGT 678
||||||||||||||| ||||| ||||| | |||| |||| ||| ||||||||||||| ||
Sbjct 677 CATTGATGACTTGGATAACTTTCAAGCTAGATGGCTCAAGAAGCCTTGGAAGAAGGCTGT 736
Query 679 GATTTTTGTTGATAATTCTGGTGCAGACATAATTTTGGGTATTTTGCCGTTTGCAAGAGA 738
||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 737 GATATTTGTCGATAATTCTGGTGCAGACATAATTTTGGGTATCTTGCCCTTTGCTAGAGA 796
Query 739 GTTGCTCCGTCGAGGAACT-CAGGTTGTGCTGGCTGCTAATGAACTGCCATCTATCAATG 797
|||| |||| ||||| | |||||||| |||||||||||||| || || |||||||| |
Sbjct 797 AATGCTACGTCTAGGAA-TGCAGGTTGTACTGGCTGCTAATGAGCTTCCGTCTATCAACG 855
Query 798 ACATAACATATACCGAGCTTACAGAGATCTTGAC-ACAGTTGAAGGATGAAAATGGCCAA 856
| |||| |||| ||||||| ||||||||||| | | || |||| ||||||||||| |||
Sbjct 856 ATGTAACTTATATCGAGCTTGCAGAGATCTTGTCTA-AGCTGAATGATGAAAATGGACAA 914
Query 857 TTGCTAGGCGTTGATACTTCGAAGCTTCTGATTGCAAATTCGGGGAATGACTTACCAGTT 916
||| | || |||||||| || || ||||| ||||||||||| |||||||||||||| |||
Sbjct 915 TTGATGGGTGTTGATACCTCAAATCTTCTTATTGCAAATTCAGGGAATGACTTACCGGTT 974
Query 917 ATCGATCTCT-CAAGAGTATCACAGGAGCTTGCTTATCTTTCAT-CTGATGCCGACTTAG 974
|| ||||| | ||||||||||||||||| |||| || || ||| | ||||| ||||| |
Sbjct 975 ATTGATCT-TGCAAGAGTATCACAGGAGGTTGCGTACCTCTCAAGC-GATGCAGACTTGG 1032
Query 975 TCATCGTAGAAGGCATGGGTCGTGGAATTGAGACAAACCTTTATGCTCAGTTCAAGTGTG 1034
||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1033 TCATCTTAGAAGGCATGGGCCGTGGAATAGAGACAAACCTTTATGCTCAGTTCAAGTGTG 1092
Query 1035 ATTCTCTGAAGATTGGAATGGTGAAGCATCTTGAAGTAGCAGAGTTTCTCGGAGGACGAC 1094
|||| || ||||| |||||||||||||||| ||||||||| |||||||||||||||| |
Sbjct 1093 ATTCCCTCAAGATCGGAATGGTGAAGCATCCAGAAGTAGCACAGTTTCTCGGAGGACGGC 1152
Query 1095 TTTATGACTGTGTTTTCAAATACAATGAAGTTCAGAGCTAATTATATTTCA 1145
||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1153 TTTATGACTGTGTCATCAAATACAATGAAGTTCAGATTTAATTATATTTCA 1203
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62349076890
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5