BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480681
Length=1298
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17830.1 | Symbols: | F-box and associated interaction doma... 1465 0.0
AT5G42460.1 | Symbols: | F-box and associated interaction doma... 1439 0.0
AT5G36200.1 | Symbols: | F-box and associated interaction doma... 298 9e-80
AT3G16880.1 | Symbols: | F-box and associated interaction doma... 167 3e-40
> AT2G17830.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7754210-7755604 FORWARD LENGTH=1395
Length=1395
Score = 1465 bits (793), Expect = 0.0
Identities = 1168/1340 (87%), Gaps = 61/1340 (5%)
Strand=Plus/Plus
Query 1 TTCAACAATGACGATAATGTCAGATCTTCCACGGGATTTGTTAGCGGAGATTCTCAGTAA 60
|||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 45 TTCAACAATGGCGATAATGTCAGATCTTCCACGGGATTTGTTAGCAGAGATTCTCAGTAG 104
Query 61 GGTTCCGTTGACATCTCTAAGAGCAGTGCGGTTCACTTGCAAAAAATGGAACGATTTATC 120
|||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 105 GGTTCCATTGGCATCTTTAAGATCAGTGCGGTTCACTTGCAAAAAATGGAACGATTTATC 164
Query 121 CAAAGATCGGAGCTTTCACAAGAAGCAAATCATCGAAGCAAAGAAGAAGCAATTGAAA-- 178
||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||
Sbjct 165 CAAAGATCGGAGCTTTCTCAAGAAACAAATCGTCGAAGCAAAGAAGAAGCAATTGAAATC 224
Query 179 GA-G---TTTGAGGTGATCATGATGAGGAATTTTAGGGTTTATCTGACGAGTGTCGATAT 234
|| | ||||||||||||||||||||||||||||| |||||||| ||||| |||||| |
Sbjct 225 GAAGGAGTTTGAGGTGATCATGATGAGGAATTTTAGAGTTTATCTAACGAGCGTCGATCT 284
Query 235 CCACAGCGATGTTGATCCATCTTTTACGCCTAAAGGTACACTTATTAGCTTAAACGATGA 294
||||| ||||||| |||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct 285 CCACAACGATGTTAATCCATCTTTTACGCCTAAAGGTACACTTACTAGCTTTAGCGATGA 344
Query 295 TGCAAATCATCATCAAGTCGATAATGTATCTAAG-GTCTTTCACTGCGATGGCTTACTCT 353
||||||||| ||||||||||||||||| |||| | ||||||||||||||||| |||||||
Sbjct 345 TGCAAATCAGCATCAAGTCGATAATGTGTCTA-GTGTCTTTCACTGCGATGGTTTACTCT 403
Query 354 TATGCATCACCAAAGACCTTAACTTTAGGCTTGTGGTTTGGAATCCTTATTTTGGGCAAA 413
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 404 TATGCATCACCAAAGACCTCAACTTTAGGCTTGTGGTTTGGAACCCTTATTTTGGGCAAA 463
Query 414 TAAGATGGATCAAACCCAGAAATTCTTATCACATTTTGGATAGTTACGCTTTTGGGTACG 473
|||||||||| |||||||||||||||| ||||| ||| | ||||||| |||||||||
Sbjct 464 CAAGATGGATCCAACCCAGAAATTCTTACCACATAAAGGACATTTACGCTATTGGGTACG 523
Query 474 ACGAGAATAAGAACCACAAAATCTTGAGATTTAAGGATAATTATTAC-ACT-T--TT-AG 528
| ||||||||||||||||||||| ||||||| |||||| | |||||| | | | || |
Sbjct 524 ATGAGAATAAGAACCACAAAATCCTGAGATTGAAGGATCAGTATTACGATTATGATTCAC 583
Query 529 -TGCACGGG-ATCAGATTTGTGAGTTTGAAGTCTATAGTTTTGAGTCTAATTCATGGAAG 586
| |||||| | | |||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 584 ATCCACGGGCA-CGGATTTGTGAGTTTGAACTCTACAGTTTTGAGTCTAATTCATGGAAG 642
Query 587 GTTGTTCTTGATGTGAGTCCTGCCTGGGATATAGAGGCTTATAACCGTGGATTGTCTCTT 646
|||||||||||||| ||||||| |||| ||||| | ||||| ||||||| |||||| |
Sbjct 643 GTTGTTCTTGATGTTAGTCCTGACTGGTATATACACTCTTATCACCGTGGCTTGTCTGTA 702
Query 647 AAGGGGAATACTTACTGGTATGCTAA-AGAGAAGCATGACAGAGGAGGAGAGGATATTGA 705
||||||||||||||||||||||| || ||||||||||| | | | || |
Sbjct 703 AAGGGGAATACTTACTGGTATGC-AACAGAGAAGCATGGCT-ATGT--------TA---A 749
Query 706 TTTCTTGATATGTTTTGATTTTACATCAGAGAGATTTGGACCGCGTCTGCCTCTGCCTTT 765
||||||||| ||||||||||| ||| | |||| ||||||||||||| |||||||||||||
Sbjct 750 TTTCTTGATCTGTTTTGATTTCACAACTGAGAAATTTGGACCGCGTTTGCCTCTGCCTTT 809
Query 766 TAACTCTTC----TCCT--ACTTGGGAAGATATTGTTACTCTCTCTAGTGTTGGAGAAGA 819
|||| || | || | |||| || ||| ||||||||||||||||||||||||||||
Sbjct 810 TAACGCTACCGAGTCTTTTACTTATGATGATGTTGTTACTCTCTCTAGTGTTGGAGAAGA 869
Query 820 TCAGCTTGCGGTGTTGTTTCAGAGCAAT-CGTACAAAG-TGGATGGAGATTTGGATTACG 877
||||||||| ||||||||||||| || | |||| | || |||||||||||| |||||
Sbjct 870 GCAGCTTGCGCTGTTGTTTCAGAGTGATGC-TACATTGATG-ATGGAGATTTGGGTTACG 927
Query 878 AGCAAGATTGAGCCTACAGAGGTTTCATGGAACAAGTTGTTCTTAGCGGTTGAT-ATGA- 935
|||||| |||| || |||||||||| |||||||| |||||||||||||||||| ||||
Sbjct 928 AGCAAGGTTGACCCCACAGAGGTTTTGTGGAACAAATTGTTCTTAGCGGTTGATCATGAT 987
Query 936 --GA--GCACTC-ACTC-GTTTTGA-GTTCCTGGCCCATGCTGGGAGTTTCTTCATTGAC 988
|| | | || ||| | || | ||| |||| | |||||||||||||||||||||
Sbjct 988 ATGATAGAATTCGACTATGAGTTAAAGTTTGTGGCAGACGCTGGGAGTTTCTTCATTGAC 1047
Query 989 CAGAAGAAGAATGTTGTTGTGGTTTTTGATAGAGATATGGATGCCCCTACCGATCGTGGC 1048
||||||||||||||||||||||||||||||| ||||||| ||| | |||| ||||||||
Sbjct 1048 CAGAAGAAGAATGTTGTTGTGGTTTTTGATAAAGATATGAATGAGCATACCCATCGTGGC 1107
Query 1049 ATGGCTTACATTATTGGGAAGAATGGATACTTCAGAAA-AGTGGATCTTGGGGAAGATGC 1107
|||||||||||| |||||||||| |||||||||| ||| ||||||| |||||||||| ||
Sbjct 1108 ATGGCTTACATTGTTGGGAAGAACGGATACTTCA-AAAGAGTGGATATTGGGGAAGAAGC 1166
Query 1108 AGACTCGAGTTGTTACCCACTTGTCTGTTCTTATGTTCCAAGCTCAGTGCAAATCAGGCA 1167
| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 ATACACGAGTTGTTTCCCACTTGTCTGTTCTTATGTTCCAAGCTCAGTGCAAATCAGGCA 1226
Query 1168 GCTAACCTGATT--TT-CTTTTTCTGGCATCTTCGATTGTATAAATCTGACCATTTTTAT 1224
|||||||||||| || |||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1227 GCTAACCTGATTACTTTCTTTTTCTGGCATCTTCGATTGTATAAATCTGACCACTGTTAT 1286
Query 1225 CACTTATCTGGAATCTCAGAGACATGGCCTCT--ACTAC-AT--GTAAACTCT-GTTGTG 1278
|| ||||||||||||||||||||||||||||| ||||| || ||||||||| || |||
Sbjct 1287 CAGTTATCTGGAATCTCAGAGACATGGCCTCTCTACTACTATATGTAAACTCTCGT-GTG 1345
Query 1279 GCTCTTCCAGACATTTCTTT 1298
||||||||||||||||||||
Sbjct 1346 GCTCTTCCAGACATTTCTTT 1365
> AT5G42460.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16979773-16981115 FORWARD LENGTH=1343
Length=1343
Score = 1439 bits (779), Expect = 0.0
Identities = 1158/1331 (87%), Gaps = 65/1331 (5%)
Strand=Plus/Plus
Query 8 ATGACGATAATGTCAGATCTTCCACGGGATTTGTTAGCGGAGATTCTCAGTAAGGTTCCG 67
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1 ATGACGATAATGTCAGATCTTCCACGGGATTTGTTAGCGGAGATTCTCAGTAGGGTTCCG 60
Query 68 TTGACATCTCTAAGAGCAGTGCGGTTCACTTGCAAAAAATGGAACGATTTATCCAAAGAT 127
||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 61 TTGACATCTCTAAGAGCAGTGCGATTGACTTGCAAAAAGTGGAACGATTTATCCAAAGAT 120
Query 128 CGGAGCTTTCACAAGAAGCAAATCATCGAAGCAAAGAAGAAGCAATTG-AA---A-G-AG 181
|||||||||| ||||||||||||| ||||| ||||||||||||||||| || | | ||
Sbjct 121 CGGAGCTTTCTCAAGAAGCAAATCGTCGAAACAAAGAAGAAGCAATTGGAATCGAAGGAG 180
Query 182 TTTGAGGTGATCATGATGAGGAATTTTAGGGTTTATCTGACGAGTGTCGATATCCACAGC 241
||||||||||||||||||||||||||||||||||||| || || |||||||||||| |
Sbjct 181 ATTGAGGTGATCATGATGAGGAATTTTAGGGTTTATCTAACAAGCATCGATATCCACAAC 240
Query 242 GATGTTGATCCATCTTTTACGCCTAAAGGTACACTTATTAGCTTAAACGATGATGCAAAT 301
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 241 AATGTTGATCCATCATTTACGCCTAAAGGTACACTTATTAGCTTAAGCGATGATGCAAAC 300
Query 302 CATCATCAAGTCGATAATGTATCTA-AGGTCTTTCACTGCGATGGCTTACTCTTATGCAT 360
||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||
Sbjct 301 CATCATCAAGTCGATAATGTATCTAGAG-TCTTTCACTGCGATGGTTTACTATTATGCAT 359
Query 361 CACCAAAGACCTTAACTTTAGGCTTGTGGTTTGGAATCCTTATTTTGGGCAAATAAGATG 420
|||||||||||| ||| |||||||||||||||||| ||||||||||| |||| ||||||
Sbjct 360 CACCAAAGACCTCCACTATAGGCTTGTGGTTTGGAACCCTTATTTTGGTCAAACAAGATG 419
Query 421 GATCAAACCCAGAAATTCTTATCACATTTTGGATAGTTACGCTTTTGGGTACGACGAGAA 480
|||| |||||||||||||||| |||| ||| | ||||||| |||||||||| |||||
Sbjct 420 GATCCAACCCAGAAATTCTTACCACAGAAAGGACAATTACGCTCTTGGGTACGATGAGAA 479
Query 481 TAAGAACCACAAAATCTTGAGATTTAAGGATAATTATTACACTTTTAGTGCACGGGATCA 540
||||||||||||||| ||||||| ||||||||||||||| || ||||||| |
Sbjct 480 GAAGAACCACAAAATCCTGAGATTGAAGGATAATTATTACGCTC------CACGGGAACG 533
Query 541 GATTTGTGAGTTTGAAGTCTATAGTTTTGAGTCTAATTCATGGAAGGTTGTTCTTGATGT 600
|||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 534 GATTTGTGAGTTTGAACTCTACAGTTTTGAGTCTAATTCATGGAAGGTTGTACTTGATGT 593
Query 601 GAGTCCTGCCTGGGATATAGAGGCTTATAACCGTGGATTGTCTCTTAAGGGGAATACTTA 660
||||||| |||| ||||| ||||||||||||| |||||||| ||||||||||||||
Sbjct 594 CAGTCCTGACTGGTATATACCTTCTTATAACCGTGGCTTGTCTCTAAAGGGGAATACTTA 653
Query 661 CTGGTATGCTAA-AGAGAAGCATGACAGAGGAGGAGAGGATATTGATTTCTTGATATGTT 719
||||||||| || ||||||||||| || | | | | ||||||||||| ||||
Sbjct 654 CTGGTATGC-AACAGAGAAGCATGTCA-ATG---------T-T-GATTTCTTGATTTGTT 700
Query 720 TTGATTTTACATCAGAGAGATTTGGACCGCGTCTGCCTCTGCCTTTTAACTCT------T 773
| ||||| ||| |||||| ||||||||||||| ||||||||||||||||| || |
Sbjct 701 TCGATTTCACAACAGAGAAATTTGGACCGCGTTTGCCTCTGCCTTTTAACGCTACCGAGT 760
Query 774 CTCCTACTTGGGAAGATATTGTTACTCTCTCTAGTGTTGGAGAAGATCAGCTTGCGGTGT 833
||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 761 CTCCTACTTATGAAGATGTTGTTACTCTCTCTAGTGTTGGAGAAGAGCAGCTTGCGGTGT 820
Query 834 TGTTTCAGAGCAA-TCGTACAAAG-TGGATGGAGATTTGGATTACGAGCAAGATTGAG-C 890
|||||||||| | | |||| | || |||||||||||| ||||||||||| ||||| |
Sbjct 821 TGTTTCAGAGTGAGTA-TACATTGATG-ATGGAGATTTGGGTTACGAGCAAGGTTGAGTC 878
Query 891 CTACAGAGGTTTCATGGAACAAGTTGTTCTTAGCGGTTGATATGAGAGCACTCA-CTCGT 949
| |||||||||| |||||||| |||||||||| ||||||| ||| |||| ||| ||| |
Sbjct 879 C-ACAGAGGTTTTGTGGAACAAATTGTTCTTAGAGGTTGATTTGATAGCAATCAGCTC-T 936
Query 950 ---TTTGAGTTCCTGGCCCATGCTGGGAGTTTCTTCATTGACCAGAAGAAGAATGTTGTT 1006
||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 937 CACTTTCAGTTTCTGGCAGAGGCTGGGAGTTTCTTCATTGACCAGAAGAAGAATGTTGTT 996
Query 1007 GTGGTTTTTGATAGAGATATGGATGCCCCTACCGATCGTGGCATGGCTTACATTATTGGG 1066
||||||||||||| ||||||||||| |||||||||| | |||||||||| || |||||
Sbjct 997 GTGGTTTTTGATAAAGATATGGATGAGGCTACCGATCGCGACATGGCTTACGTTGTTGGG 1056
Query 1067 AAGAATGGATACTTCAGAAAAGTGGATCTTGGGGAAGATGCAGACTCGAGTTGTTACCCA 1126
||||| |||||||||| |||||||||| |||||||||| ||| || ||||||||| ||||
Sbjct 1057 AAGAACGGATACTTCAAAAAAGTGGATATTGGGGAAGAAGCATACACGAGTTGTTTCCCA 1116
Query 1127 CTTGTCTGTTCTTATGTTCCAAGCTCAGTGCAAATCAGGCAGCTAACCTGATT-TT-C-- 1182
||||| |||||||||||||||||||||| |||||||||||||||||||||||| || |
Sbjct 1117 CTTGTATGTTCTTATGTTCCAAGCTCAGAGCAAATCAGGCAGCTAACCTGATTATTACGA 1176
Query 1183 --T--T-TTT-CTG-----G-CATCTTCGATTGTATAAATCTGACCATTTTTATCACTTA 1230
| | ||| || | |||||||||||||||||||||||||||| |||||| |||
Sbjct 1177 ACTACTGTTTTCTTTTTCTGTCATCTTCGATTGTATAAATCTGACCATTGTTATCAGTTA 1236
Query 1231 TCTGGAATCTCAGAGACATGGCCTCT--ACTACATGTAAACTCT-GTTGTGGCTCTTCCA 1287
|||||||||||||||||||||||||| |||| ||||||||||| || |||||||||| |
Sbjct 1237 TCTGGAATCTCAGAGACATGGCCTCTCTACTATATGTAAACTCTCGT-GTGGCTCTTCTA 1295
Query 1288 GACATTTCTTT 1298
|||||||||||
Sbjct 1296 GACATTTCTTT 1306
> AT5G36200.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14244106-14246296 REVERSE LENGTH=1416
Length=1416
Score = 298 bits (161), Expect = 9e-80
Identities = 433/556 (78%), Gaps = 51/556 (9%)
Strand=Plus/Plus
Query 639 TGTCTCTTAAGGGGAATACTTACTGGTATGCTA-A-AGAGAAGCATGACAGAGGAG---G 693
||||||| ||||| || |||||||||| ||||| | ||| || || | ||||||| |
Sbjct 647 TGTCTCTCAAGGGAAACACTTACTGGTTTGCTAGAGAGATAAATAT-A-AGAGGAGAAAG 704
Query 694 ---AGAGGAT-AT--TGATTTCTTGATATGTTTTGATTTTACATCAGAGAGATTTGGACC 747
||| ||| | ||| |||||||| |||||||| |||||| ||||||||||||||||
Sbjct 705 AATAGATGATCCTCCTGACTTCTTGATCTGTTTTGACTTTACAACAGAGAGATTTGGACC 764
Query 748 GCGTCTGC-CTCTGCCTTTTAACTCTTCTCCTACTTGGGAAGATATTGTTACTCTCTCTA 806
|||||| | | ||||| ||| | | ||| | | || || |||| ||| | ||||||||
Sbjct 765 GCGTCTTCAC-CTGCCCTTT--CAC-TCT-C-A-TTCTGATGATACTGTGATTCTCTCTA 817
Query 807 GTGTTGGAGAAGATCAGCTTGCGGTGTTGTTTCAGAGCAATCG-TACAAAGTGGATGGAG 865
||||| ||||||| ||||||||||||||| || || || ||| | | | ||||||||
Sbjct 818 GTGTTAGAGAAGAACAGCTTGCGGTGTTGATTAAGCGC-TTCGATTTATGGAGGATGGAG 876
Query 866 ATTTGGATTACGAGC-AAGATTGAGCCTACA-GAGGTTTCATGGAACAAGTTGTTCTTAG 923
|||||| |||||| | ||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct 877 ATTTGGGTTACGA-CTAAGATTGAGCCTA-AGGAGGTCTCATGGAACAAGTTGTTCTTAG 934
Query 924 CGGTTGATATGAGAGCACT---CACT-CGTTTTGAGTTCCTGGCCCATGCTGGGAGTTTC 979
|||||||||||| | |||| |||| | |||| |||| || ||| || |||||
Sbjct 935 CGGTTGATATGATACCACTGATCACTGC-TTTTCAGTTT-TGTA--ATG-TG--AGTTTT 987
Query 980 TTCATTGACCAGAAGAAGAATGTTGTTGTGGTTTTTGATAGAGATATGGATGCCCCTACC 1039
||||||||| ||||||||||||| || |||||| ||| || |||| || || |||
Sbjct 988 TTCATTGACGAGAAGAAGAATGTCGTCGTGGTTCTTGGTAAAGATGTGT-TGAA--TAC- 1043
Query 1040 GATCGTGGCATGGCTTACATTATTGGGAA-GAATGGATACTTCAGAA-AAGTGGATCTTG 1097
| || ||| ||| | |||||||| || || ||||||||| | || ||||||||||||
Sbjct 1044 -A-CGAAACATAGCTAATATTATTGGAAATGA-TGGATACTTTA-AACAAGTGGATCTTG 1099
Query 1098 GGGAAGATGCAGACTCG-AGTTGTTACCCACTTGTCTGTTCTTATGTTCCAAGCTCAGTG 1156
| ||| | || || | ||||||||||||||| || |||||||||||||| ||||||
Sbjct 1100 GAGAATCTACAAACAAATA-TTGTTACCCACTTGTGTGCTCTTATGTTCCAAGTTCAGTG 1158
Query 1157 CAAATCAGGCA-GCTA 1171
||||||| ||| ||||
Sbjct 1159 CAAATCAAGCAAGCTA 1174
> AT3G16880.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:5766733-5767830 FORWARD LENGTH=1098
Length=1098
Score = 167 bits (90), Expect = 3e-40
Identities = 309/406 (76%), Gaps = 50/406 (12%)
Strand=Plus/Plus
Query 703 TGATTTCTTGATATGTTTTGATTTTACATCAGAGAGATTTGGACCG-CGTCTGCCTCTGC 761
||| |||||||| | ||||||||||||| ||||||||||||||||| | |||||||||||
Sbjct 642 TGACTTCTTGATTTCTTTTGATTTTACAACAGAGAGATTTGGACCGAC-TCTGCCTCTGC 700
Query 762 CTTTTAACTCTTCTCCTAC-TTG-GGAAGATATTGTTACTCTCTCTAGTGTTGGAGAAGA 819
| || | | || || | ||| || ||||||||| |||||||||||||| |||||||
Sbjct 701 C-GTT--C-C-ACT-CT-CGTTGTGG-AGATATTGTGGCTCTCTCTAGTGTTAGAGAAGA 752
Query 820 TCAGCTTGCGGTGTTGTTTCA--G-AGCAATCGTA-CAAAGTGGATGGAGATTTGGATTA 875
| ||||| ||||| |||| | ||||| || | || |||||||||| |||||||
Sbjct 753 GAAACTTGCAGTGTTACTTCACCGCTGCAAT-ATATC-AA--GGATGGAGATATGGATTA 808
Query 876 CGAGCAAGATTGAG-CCTACAGAGGTTTCAT-GGAACAAGTTGTTCTTAGCGGTTGATAT 933
| | |||||||||| || ||| | || || | || | |||||||||||| | || || ||
Sbjct 809 CTAACAAGATTGAGCCCAACA-ATGTGTCGTGGGGA-AAGTTGTTCTTAACAGTGGACAT 866
Query 934 GAGAGCACTCACTCGTTTTGAGTTCCTGGCCCATGCTGGGAGTTTCTTCATTGACCAGAA 993
|| | || ||||| || | | | | ||| ||| | ||||||||||||| || |
Sbjct 867 GA-A--AC-CACTC--ATT-A--T--T-G---ATGATGGAATTTTCTTCATTGACGAGGA 911
Query 994 GAAGAATGTTGTTGTGGTTTTTGAT-A-GAGATATG-GATGCCCCTACCGATCGTGGCAT 1050
|||||| || ||||||||||||||| | || | | | |||| |||| | | ||
Sbjct 912 GAAGAAAGTAGTTGTGGTTTTTGATAAGGACA-AAGAGATG-AGAAACCG-T-AT--CAC 965
Query 1051 GGCTTACATTATTGGGA-AGAATGGATACTTCAGAAAAGTGGATCT 1095
|||||||| ||| ||| ||||||||||||||||||||||||||||
Sbjct 966 AGCTTACATCATT-GGAGAGAATGGATACTTCAGAAAAGTGGATCT 1010
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63855093240
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5