BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480695
Length=1784
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17970.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 2569 0.0
> AT2G17970.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr2:7818940-7821373
REVERSE LENGTH=1797
Length=1797
Score = 2569 bits (1391), Expect = 0.0
Identities = 1679/1812 (93%), Gaps = 43/1812 (2%)
Strand=Plus/Plus
Query 1 ACACTGACAAAAGAGTACTCGATTCCAAATCGTGGACTAAGAAATTTTGAATTTTCTGTA 60
||||||||||||||||||| |||| |||||||||||||| |||| |||||||||||||||
Sbjct 1 ACACTGACAAAAGAGTACTAGATTTCAAATCGTGGACTAGGAAA-TTTGAATTTTCTGTA 59
Query 61 ACAAGAGGATTAGA-TTCGATTGAATCGAGCGAATCAAATGGAAGACGATTCATTTCTCC 119
||||||| | |||| || ||||| |||||||| ||| |||||| ||||| |||||||||
Sbjct 60 ACAAGAGTACTAGATTTGGATTGTATCGAGCGTATCTCATGGAAAACGATCCATTTCTCC 119
Query 120 GGCAGTACCAGCCGTCGGAACTTAAGATCGTTTCGGAATTTCTGACGAATTGGCTTCCTT 179
||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||
Sbjct 120 GGCAGTACCAGCCGTCGGAGCTTAAGATCGCTTCGGAGTTTCTGACGAATTGGCTTCCTT 179
Query 180 TCTTATCTAAAGATCTATGCGAGGACTGTAATCACCTTCTCTCCAATCGAATCCGTTCTC 239
| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 180 TTTTATCTAAAGATCTATGCAAGGATTGTAATCACCTTCTCTCCAATCGAATCCGTTCTC 239
Query 240 TTGACCCAGGACATTGTAGTAAC-ACA--GATAAAGTTGATGGAGAGTGTAAAACTGGTT 296
||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct 240 TTGACCCAGCACATTGTAGTAACAACACTGACAAAGTTGATGGAGAGTGTAAAACTGGTT 299
Query 297 CTGGTTCGGTGGTGGGAACTATGGGATCAGAAAGAGTTAGTAACAGTGTGGATG------ 350
|| |||| ||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct 300 CTTGTTCAGTGGTGGAAAATATGGGATCAGAAAGAGCTAGTAACAATGTGGATGATAATT 359
Query 351 --G-T---AAGTCGGAAAAGGGCGAAGACTGTGATAATCATTCGTTAGGTGGTTGGAA-G 403
| | ||||||||||| |||||||||||||||||||||||||||||| ||||||| |
Sbjct 360 ATGATGAGAAGTCGGAAAATGGCGAAGACTGTGATAATCATTCGTTAGGTAGTTGGAAGG 419
Query 404 GAGAGTGAAATTGTATTTGGTTCCATTT-CTGAAG-TTTTAGGTAGTGTACTGCCCTCTA 461
|| ||||||||||||||||||||| ||| |||||| ||||| |||||||| ||| ||||
Sbjct 420 GA-AGTGAAATTGTATTTGGTTCC-TTTCCTGAAGATTTTA-GTAGTGTATTGCAATCTA 476
Query 462 GACCAGCTGTTGTTGAAACAGCAAGCCCTCGGATGTC-TTGGGCTGATATGACACAAGAG 520
||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||||
Sbjct 477 GACCAGCTGTTGTTGAAACAGCAAGCCCTCGTATG-CGTTGGGCTGATATGGCACAAGAG 535
Query 521 GATGA-TGAGTTCGACgaggaggaggaggaggaAGAGCAGAGGGATTCGAGTAGGAAAGG 579
||||| | | | || ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 536 GATGAGTTCGAT-GAGGAGGAGGAGGAGGAGGAAGAGGAGAGGGATTCGAGTAGGAAAGG 594
Query 580 TTTTGATGCGAGTTCGATGAGGACTCCAGAGAAGCCTAAGTTGTCTAGAGATCAGAGAGA 639
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 595 TTTTGATGCGAGTTCGATGAAGACTCCAGAGAAGCCTAAGTTGTCTAGAGATCAGAGAGA 654
Query 640 GAATCTTAGGCTGATGAATGTGAAGAGAAAGAAAGACTTCATTTGTTTGGAGAGAGTTAA 699
|||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 655 GAATCTCAGGCTGATTAATGTGAAGAGAAAGAAAGACTTTATTTGCTTGGAGAGAGTTAA 714
Query 700 GGGAAAGATCGTTAATGTGCTTGATGGACTTGAGTTGCACACTGGTGTTTTTAGCGCTGT 759
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 715 GGGAAAGATTGTTAACGTGCTTGATGGACTTGAGTTGCACACTGGTGTTTTTAGCGCAGT 774
Query 760 GGAGCAGAAACGGATTGTTGATCAAGTGTATCAACTTCAAGAGAAGGGACGAAAAGGAGA 819
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 775 GGAGCAGAAACGGATTGTTGATCAAGTGTATCAACTTCAAGAGAAGGGACGAAGAGGAGA 834
Query 820 ACTTAAAAAGCGTACATTTACTGCTCCACATAAGTGGATGAGAGGCAAAGGACGTGAGAC 879
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 835 ACTTAAAAAGCGTACATTTACTGCTCCACATAAGTGGATGAGAGGAAAAGGACGTGAGAC 894
Query 880 TATACAATTTGGCTGTTGTTACAACTACGCTCCAGACAGAGCTGGAAACCCACCGGGTAT 939
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 895 TATACAATTTGGCTGTTGCTACAACTACGCTCCAGACAGAGCTGGAAACCCACCGGGTAT 954
Query 940 CCTTCAACGTGAAGAAGTGGATCCATTACCTCCTCTTTTCAAAGTAATCATAAGAAGGTT 999
||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||
Sbjct 955 CCTTCAACGTGAAGAAGTGGATCCACTACCTCATCTTTTCAAAGTAATCATTAGAAAGTT 1014
Query 1000 GATTAAATGGCATGTACTGCCTCCAACTTGTGTGCCCGATAGCTGCATTGTAAACATCTA 1059
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1015 GATTAAATGGCATGTACTGCCTCCAACTTGTGTGCCCGATAGCTGCATTGTGAACATCTA 1074
Query 1060 TGATGAAGGTGACTGCATACCTCCGCACATCGACAACCATGACTTTCTGCGTCCGTTCTG 1119
|||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct 1075 TGATGAAGGTGACTGCATACCTCCTCACATCGACAACCACGACTTTCTCCGTCCCTTCTG 1134
Query 1120 CACCATCTCTTTCCTCAGTGAATGCGATATCCTCTTTGGCTCAAACCTGAATGTTGAGGG 1179
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1135 TACCATCTCTTTCCTCAGTGAATGCGATATCCTCTTTGGCTCAAACCTGAAAGTTGAGGG 1194
Query 1180 TCCTGGTGAATTCTCGGGTTCATACTCAATACCGCTTCCTGTGGGATCAGTTCTGGTGTT 1239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 TCCTGGTGACTTCTCGGGTTCATACTCAATACCGCTTCCTGTGGGATCAGTTCTGGTGTT 1254
Query 1240 AAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTACCTGCAGTTCCCACAAAAAGGAT 1299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1255 AAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTACCTGCAGTTCCTACAAAAAGGAT 1314
Query 1300 ATCAATCACATTTAGGAAAATGGATGAGTCAAAACGCCCGGTTTGGTTCACCCCAGAGCC 1359
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1315 ATCAATTACATTTAGGAAAATGGATGAGTCGAAACGCCCGGTTTGGTTCACCCCAGAGCC 1374
Query 1360 TGATTTGCAAGGGATCGAGCCATTGCCATTGGAGCTGAACCGCTCTGGTTCTGCTTCAAG 1419
||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct 1375 TGATTTGCAAGGGATTGAGCCATTGCCATTGGACCTGAACCGGTCTGGTTCTACTTCAAG 1434
Query 1420 GTCCTCAGGATTTAACAACCATAACAGCACTAACCGAAGAGGACATGGACGTAGACGAGG 1479
|| |||| |||| |||||||||||| | ||||||| ||||||||||||||||||| ||||
Sbjct 1435 GTTCTCAAGATTAAACAACCATAACGGTACTAACCAAAGAGGACATGGACGTAGAGGAGG 1494
Query 1480 AGGCAATAGTTATGAGTCAAGAGGTTACTATAATCCTGAGAGAAGCAGTGAACAGAATGA 1539
||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1495 AGGCAATGGTTATGACTCAAGAGGTTACTATAATCCTGAGAGAAGCAGTGAACACAATGA 1554
Query 1540 CTCTGGAGACTGGCCATCAAGCCAGAGAAGAGGAATGCCACGTCCTAGTAGAAGAAACTA 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTCTGGAGACTGGCCATCAAGCCAGAGAAGAGGAATGCCACGTCCTAGTAGAAGAAACTA 1614
Query 1600 AGGTTAAATTCTTCTACTTCTGAAGCTGAAATTTATAGGTTCTTTCTTTATTTAACCAAT 1659
||||||||||||| ||||||||| |||||||||||| ||||||| |||| |||||||||
Sbjct 1615 CGGTTAAATTCTTCAACTTCTGAAACTGAAATTTATAAGTTCTTTATTTAATTAACCAAT 1674
Query 1660 TTTCCATAT---TA-TTAATTTGTGCAACATATTTTACACAACGTTCT-GAATTTTTT-- 1712
||||||||| || |||||||||||||||||| | ||| || || || |||||||||
Sbjct 1675 TTTCCATATAAATAATTAATTTGTGCAACATATAT-ACATAA-GT-CTTGAATTTTTTTT 1731
Query 1713 CAAACAATTTTTTATGTCCGGGGTAGttttttttttttttCCGATTTTGAATTTTTGACC 1772
||||||||| ||||||||||||||| ||||| | | ||| ||||||||||||||||
Sbjct 1732 CAAACAATTATTTATGTCCGGGGTA-TTTTTATAT-----CCGTTTTTGAATTTTTGACC 1785
Query 1773 GTATTTGTAATT 1784
||||||||||||
Sbjct 1786 GTATTTGTAATT 1797
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88252558110
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5