BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480697 Length=863 Score E Sequences producing significant alignments: (Bits) Value AT2G17975.1 | Symbols: | zinc finger (Ran-binding) family prot... 1267 0.0 > AT2G17975.1 | Symbols: | zinc finger (Ran-binding) family protein | chr2:7822074-7824005 REVERSE LENGTH=1006 Length=1006 Score = 1267 bits (686), Expect = 0.0 Identities = 805/863 (93%), Gaps = 6/863 (1%) Strand=Plus/Plus Query 1 GTCGCCGGCGACTGGAGTTTTTCCGGGAAGAGGAAATGGGAGACGGGAGAGAAGGAGATT 60 |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct 1 GTCGCCGGAGACTGGAGTTTTTCCGGGAAGAAGAAATGGGAGACGGAAGAGAAGGAGACT 60 Query 61 GGGAATGTTTAGGTTGTAGAAACAGGAATTATGCGTTTAGATCATTCTGCAATAGATGCA 120 ||||||||||||| || |||||||||||||||||||||||||||||||| || ||||||| Sbjct 61 GGGAATGTTTAGGATGCAGAAACAGGAATTATGCGTTTAGATCATTCTGTAACAGATGCA 120 Query 121 AGCAGCCTCGTCTTTTCATGGATAACAATACTTCTTCAAACTCCAAGTGGCTTCCTCGTA 180 |||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||| Sbjct 121 AGCAGCCTCGTCTTATCATGGATAATAATACTTCTCCAAACTCTAAGTGGCTTCCTCGTA 180 Query 181 TCGGAGATTGGATCTGCACTGGTTGCACTAACAACAATTATGCATCACGAGAAAAGTGCA 240 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 181 TCGGCGATTGGATCTGCACTGGTTGTACTAACAACAATTATGCATCACGAGAAAAGTGCA 240 Query 241 AAAAATGCGGGCAACCTAAGGAAGTAGCAGCATTGTCAGCACTTGCAATCCCTGGAGCTT 300 | ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 241 AGAAATGTGGGCAATCTAAGGAAGTAGCAGCATTGTCAGCACTTGCTATCCCTGGAGCTT 300 Query 301 CTCTTCAGACTCATCTCCATTACTTCGCTCGTGGGCCTGAGTCA-ATCGATCAATCTGGT 359 ||||||| |||||||||||||||||| | ||||| ||||||||| || |||||| ||||| Sbjct 301 CTCTTCAAACTCATCTCCATTACTTCACCCGTGGACCTGAGTCACAT-GATCAACCTGGT 359 Query 360 TCCTTACTTGCATTCTCTAACGCTGCAAATCAAGCTTCGGTTCTTAAAGAATGGAGGAGC 419 || ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 360 TCTTTACTCGCATTCTCTAACGCTACAAATCAAGCTTCGGTTCATAAAGAATGGAGGAGT 419 Query 420 GGTGACTGGATTTGCAGATGTGGTTTTCACAATTATTCCTCTCGTATACAGTGCAAAAAG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GGTGACTGGATTTGCAGATGTGGTTTTCACAATTATTCCTCTCGTATACAGTGCAAAAAG 479 Query 480 TGCAATGAAACAGCTCCACTAGCCCCTGGAACAAAGAGATTAGCATCAGAAGCTTTGGCT 539 |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 480 TGCAATGAAATAGCTCCACTAGCCCTTGGTACAAAGAGATTAGCATCAGAAGCTTTGGCT 539 Query 540 CATGAATGGGATAGCAAAAGACTGAATCAAGGATTTACAAGCATGCAACCAAATTCAGCG 599 |||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||| Sbjct 540 CATGAATGGGATAGCAAAAGACTGAATCAAGGATATACAAGCATGCAAACACAGTCAGCG 599 Query 600 ATATATG-AGTCTTTTCCTGGTATGAGCCCAGGAAGGATCTCAAATTGGCAACTTCCTCT 658 ||||||| | ||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 600 ATATATGCA-TCTTTTCCTGGTATGAGCCTAGGAAGGGTCTCAAATTGGCAACTTCCTCT 658 Query 659 CCCGTTTCTACAGCAACATTCAACACCTGCTTTACTTGGAAAAGGAGCAAAACAATGGCA 718 |||||||||||| ||||| |||||||||||||||||||||| |||| |||||||||| Sbjct 659 CCCGTTTCTACAACAACACTCAACACCTGCTTTACTTGGAATGGGAGTGAAACAATGGCG 718 Query 719 CGATGGAGACTGGATGTGCACAAATTGCAAGAATCACAATTATGCATCTCGATCAGAGTG 778 ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| Sbjct 719 TGATGGCGACTGGATGTGTACAAATTGCAAGAATCACAATTATGCATCACGAGCAGAGTG 778 Query 779 CAATAGGTGCAAGACTACACGAGATATTCTTAATCAGGACATAACTCCAACACAACAATC 838 ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| Sbjct 779 CAATAGGTGCAAGACTACACGAGATATCCTTGATCAGGACATAACTCCAACAGAACAATC 838 Query 839 TTGAAGAAT-CATGAAGAGTGTT 860 ||||| ||| ||||||||||||| Sbjct 839 TTGAA-AATTCATGAAGAGTGTT 860 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42096215186 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5