BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480713
Length=1254
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18080.1 | Symbols: EDA2 | Serine carboxypeptidase S28 famil... 1923 0.0
AT4G36190.1 | Symbols: | Serine carboxypeptidase S28 family pr... 944 0.0
> AT2G18080.1 | Symbols: EDA2 | Serine carboxypeptidase S28 family
protein | chr2:7857198-7859715 FORWARD LENGTH=1470
Length=1470
Score = 1923 bits (1041), Expect = 0.0
Identities = 1187/1258 (94%), Gaps = 8/1258 (1%)
Strand=Plus/Plus
Query 1 ATGGACTACTTTCGAGCTCCAGATGGGCCTTTGTTTATGATAATCTGCGGTGAAGGTCCT 60
||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 217 ATGGACTACTTTCGATCTCCAGATGGGCCTATGTTTATGATAATATGCGGTGAAGGTCCT 276
Query 61 TGTAGTGGCATAGCTAATGATTATATAAATGTATTAGCAAAGAAGTTTCAAGCAGGTGTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 TGTAGTGGCATAGCTAATGATTATATAAATGTATTAGCAAAGAAGTTTCAAGCAGGTGTG 336
Query 121 GTTTCACTAGAACATAGGTACTATGGAAAAAGCTCCCCCTTTAACTCATTAGCTACAGAG 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 337 GTTTCACTAGAACATAGGTACTATGGAAAAAGCTCCCCCTTTAACTCATTAGCTACAGAA 396
Query 181 AATCTGAAATACCTTTCATCAAAACAAGCCCTTTTCGATTTGGCCGCTTTCCGACAATAT 240
||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||
Sbjct 397 AATTTGAAATACCTTTCATCGAAACAAGCCCTTTACGATTTGGCATCTTTCCGACAATAT 456
Query 241 TACCAGGAATCTTTGAATGTTAAGTTGAATATGAGTAATGGTGGTAATGAAAATCCGTGG 300
|||||||||||| ||||| ||||||||||| |||| |||||||| ||| |||||||||
Sbjct 457 TACCAGGAATCTCTGAATAAGAAGTTGAATATAAGTAGTGGTGGTAGTGACAATCCGTGG 516
Query 301 TTCTTCTTCGGGATTTCTTATTCTGGAGCTTTAAGTGCCTGGTTTAGGCTTAAGTTCCCG 360
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 517 TTCTTCTTCGGGATTTCTTATTCTGGAGCTTTAAGTGCGTGGTTTCGGCTTAAGTTCCCG 576
Query 361 CATTTGACGTGTGGAAGCCTTGCTAGTTCTGCAGTCGTTCGCGCGGTCTATGAATTCACT 420
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 577 CATTTGACGTGTGGAAGCCTTGCTAGTTCTGCAGTCGTTCGTGCAATCTATGAATTCTCT 636
Query 421 GAATTTGATCAGCAGATAGGTGAGTCAGCTGGTCAAGAATGCAAAGGTGCATTACAAGAG 480
||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||
Sbjct 637 GAATTTGATCAGCAGATAGGTGAATCAGCTGGTCAAGAATGCAAACTTGCACTACAAGAG 696
Query 481 ACTAATAAACTCCTCGAATTAGGGCTTAAAG-AAAACAGAAAGGCAGTGAAATCCCTCTT 539
||||||||||| || |||||||||||||||| |||| | || |||||||||||| |||||
Sbjct 697 ACTAATAAACTTCTGGAATTAGGGCTTAAAGTAAAAAATAA-GGCAGTGAAATCTCTCTT 755
Query 540 CAATGCCACCGAGCTTGATGTTGATGCTGATTTCTTATACTTAACGGCAGATGCAGCGGT 599
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 756 CAATGCCACTGAGCTTGATGTTGATGCTGATTTTTTATACTTAACGGCAGATGCAGCGGT 815
Query 600 TATGGCGTTTCAGTATGGAAATCCAGATAAACTATGTGTCCCGCTTGTTGAAGCAAAGAA 659
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 816 TATGGCGTTTCAATATGGAAATCCAGATAAACTATGTGTCCCGCTTGTTGAAGCAAAGAA 875
Query 660 GAATGGTAGTGATTTAGTGGAAACATATTCTAA-ATACGTTAGAGAGTATTGCATGAGAT 718
|||||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||
Sbjct 876 GAATGGTAGTGATTTAGTGGTAACATATTC-AACATATGTTAGAGAGTATTGCATGAGAA 934
Query 719 TTTGGGGGCTACGTGTAAGAACATATAACCGAAAACATCTAAGAAACACTGTCGTTACCG 778
||||||| ||||||| ||||||||||||||||||||||| |||||||| || |||||||
Sbjct 935 TTTGGGGATTACGTGTTAGAACATATAACCGAAAACATCTGAGAAACACAGTAGTTACCG 994
Query 779 CAGACAGCGCATATCGGTTATGGTGGTTTCAAGTTTGCACAGAACTAGGATATTTCCAGG 838
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 995 CAGACAGTGCATATCGGTTATGGTGGTTTCAAGCTTGCACAGAACTAGGATATTTCCAGG 1054
Query 839 TGGCACCTAAAAATGATAGTGTTCGATCTCAGCAAATCAATACAATGTTCCATTTGGATT 898
||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct 1055 TGGCACCTAAATATGATAGTGTTCGATCTCATCAAATCAATACAACGTTTCATTTGGATT 1114
Query 899 TATGCAAGAGCCTGTTTGGAGAAGG-TGTTTACCCTAAAGTTGACGCAACAAACTTGTAC 957
||||||||||||| ||||| ||| | |||||||||||||||||| |||||||||||||||
Sbjct 1115 TATGCAAGAGCCTTTTTGG-GAAAGATGTTTACCCTAAAGTTGATGCAACAAACTTGTAC 1173
Query 958 TATGGAGGCGATAGACTCACCGCAACCAAAATCATTTTCACAAATGGTTCAGAAGATCCA 1017
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 1174 TATGGAGGCGATAGACTCGCCGCAACCAAAATCATTTTCACAAATGGGTCAGAAGATCCA 1233
Query 1018 TGGCGTCATGCTTCCAAACAGAACTC-ATCTCATGAAATGCCTTCTTACATCATAAAATG 1076
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1234 TGGCGTCATGCTTCCAAACAGAACTCTA-CTCATGAAATGCCTTCTTACATCATAAAATG 1292
Query 1077 TCGTAACTGTGGCCATGGAACTGATATAAGAGGATGCCCTCAATCTCCAATGGTCATTGA 1136
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1293 TCGTAACTGTGGCCATGGAAGTGATATAAGAGGATGCCCTCAATCTCCAATGGTCATTGA 1352
Query 1137 AGGTAAATCAAATAATTGCAGCTTACCAGATTATGTAAACAAAGTAAGGCAACAAATGGT 1196
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1353 AGGTAAATCAAATAATTGCAGCTTACCCGATTATGTAAACAAAGTAAGGCAACAGATGGT 1412
Query 1197 AGAACATATTGACTTGTGGTTGTCTGAGTGTCGCAAACCGATTAGGAGTTCAATATAG 1254
|||||| |||||||||||| |||||||||||||| || | ||||||||||||||||||
Sbjct 1413 AGAACACATTGACTTGTGGCTGTCTGAGTGTCGCCAATCTATTAGGAGTTCAATATAG 1470
> AT4G36190.1 | Symbols: | Serine carboxypeptidase S28 family
protein | chr4:17123966-17127018 FORWARD LENGTH=1910
Length=1910
Score = 944 bits (511), Expect = 0.0
Identities = 1008/1244 (81%), Gaps = 50/1244 (4%)
Strand=Plus/Plus
Query 10 TTT-CGAGCTCCAGATGGGCCTTTGTTTATGATAATCTGCGGTGAAGGTCCTTGTAGTGG 68
||| |||| ||| || || ||| | ||| | || || ||||| ||||| ||||| | |||
Sbjct 311 TTTACGAGTTCCTGACGGACCTATCTTTCTCATGATTTGCGGCGAAGGACCTTGCAATGG 370
Query 69 CAT-AGCTAATGATTATATAAATGTATTAGCAAAGAAGTTTCAAGCAGGTGTGGTTTCAC 127
|| | | ||| | ||||| | ||| || |||||||||||| | ||||| | |||||||
Sbjct 371 AATCA-CCAATAACTATATTAGTGTGTTGGCAAAGAAGTTTGATGCAGGCATTGTTTCAC 429
Query 128 TAGAACATAGGTACTATGGAAAAAGCTCCCCCTTTAACTCATTAGCTAC-AGAGAATCTG 186
| || ||| | ||||||||||| ||||| || ||||| || ||||| || | |||||||
Sbjct 430 TCGAGCATCGTTACTATGGAAAGAGCTCACCATTTAAGTCGTTAGCCACTA-AGAATCTC 488
Query 187 AAATACCTTTCATCAAAACAAGCCCTTTTCGATTTGGCCGCTTTCCGACAATATTACCAG 246
|| || ||||| || ||||| ||||||| |||||| || ||||||| ||||||||||||
Sbjct 489 AAGTATCTTTCTTCCAAACAGGCCCTTTCCGATTTAGCTACTTTCCGCCAATATTACCAG 548
Query 247 GAATCTTTGAATGTTAAGTTGAATATG-AGTAATGGTGGTAATGAAAATCCGTGGTTCTT 305
|| ||||||||||||||||| |||| | || | | || ||| ||||||||||| ||
Sbjct 549 GACTCTTTGAATGTTAAGTTTAATA-GAAGCAGCAAT-GT--TGAGAATCCGTGGTTTTT 604
Query 306 CTTCGGGA-TTTCTTATTCTGGAGCTTTAAGTGCCTGGTTTAGGCTTAAGTTCCCGCATT 364
||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct 605 CTT-TGGAGTATCTTATTCTGGAGCTTTAAGTGCTTGGTTCCGGCTTAAGTTCCCTCATT 663
Query 365 TGACGTGTGGAAGCCTTGCTAGTTCTGCAGTCGTTCGCGCGGTCTATGAATTCACTGAAT 424
|||| ||||||||||| |||||||| ||||| ||||| || ||||| |||||| | ||||
Sbjct 664 TGACCTGTGGAAGCCTCGCTAGTTCAGCAGTTGTTCGTGCTGTCTACGAATTCCCCGAAT 723
Query 425 TTGATCAGCAGATAGGTGAGTCAGCTGGTCAAGAATG-CAAAGGTGCATTACAAGAGACT 483
||||||| ||||||| |||||| ||||| | ||||| ||| ||| |||||||||||
Sbjct 724 TTGATCAACAGATAGCTGAGTCGGCTGGACCGGAATGTGAAA-CTGCGCTACAAGAGACT 782
Query 484 AATAAACTCCTCGAATTAGGGCTTAAA--GAA-AACAGAAAGGCAGTGAAATCCCTCTTC 540
||||||||| | ||| ||||||||||| ||| ||||| ||| || ||| | ||||||
Sbjct 783 AATAAACTCTTGGAACTAGGGCTTAAAGTGAATAACAG---GGCTGTTAAAGCTCTCTTC 839
Query 541 AATGCCACCGAGCTTGATGTTGATGCTGATTTCTTATACTTAACGGCAGATGCAGCG-GT 599
|||||||| |||||||||||||||||||||||||||||||||| || ||||||| | ||
Sbjct 840 AATGCCACGGAGCTTGATGTTGATGCTGATTTCTTATACTTAATAGCGGATGCAG-GAGT 898
Query 600 TATGGCGTTTCAGTATGGAAATCCAGATAAACTATGTGTCCCGCTTGTTGAAGCA-AAGA 658
||||||| |||| || ||||| ||||||||||||||||| || || || ||||| || |
Sbjct 899 TATGGCGATTCAATACGGAAACCCAGATAAACTATGTGTACCACTCGTGGAAGCTCAA-A 957
Query 659 AGAATGGTAGTGATTTAGTGGAAACATATTCTAAATACGTTAGAGAGTATTGCATGAGA- 717
|||||||| |||||||||||||| ||||| ||||||| |||||||||| ||||||| ||
Sbjct 958 AGAATGGTGGTGATTTAGTGGAAGCATATGCTAAATATGTTAGAGAGTTTTGCATGGGAG 1017
Query 718 TTTTGGGGGCTACG-TGTAAGAACATATAACCGAAAACATCTAAGAAACACTGTCGTT-A 775
|||| ||| | | | | ||| |||||||| ||| ||||||||| | |||||| || | |
Sbjct 1018 TTTTCGGG-CAAAGCTCTAA-AACATATAGCCGGAAACATCTACTAGACACTG-CGGTCA 1074
Query 776 CCGC-AGACAGCGCATATCGG-TTATGGTGGTTTCAAGTTTGCACAGAACTAGGAT-ATT 832
|| | ||| || ||| || || || |||||||| |||||||| || ||| | || | |||
Sbjct 1075 CC-CTAGAGAGTGCAGATAGGCTT-TGGTGGTTCCAAGTTTGTACTGAAGT-GGCTTATT 1131
Query 833 TCCAGGTGGCACCTAAAAATGATAGTGTTCGATCTCAGCAAATCAATACA-ATGT-TCCA 890
|||||||||||||| ||| ||||| | || ||||| || ||||||||| | || || |
Sbjct 1132 TCCAGGTGGCACCTGCAAACGATAGCATCCGGTCTCATCAGATCAATACAGA-GTATC-A 1189
Query 891 TTTGGATTTATGCAAGAGCCTGTTTGGAGAA-GGTGTTTACCCTAAAGTTGACGCAACAA 949
||||||| ||||||||||||| ||||| ||| ||||| |||||| |||| || |||||||
Sbjct 1190 TTTGGATCTATGCAAGAGCCTCTTTGG-GAAAGGTGTCTACCCTGAAGTCGATGCAACAA 1248
Query 950 ACTTGTACTATGGAGGCGATAGACTCACCGCAACCAAAATCATTTTCACAAATGGTTCAG 1009
|||||||||||||| |||||| | | | || ||||| || || ||||||||||| |||
Sbjct 1249 ACTTGTACTATGGAAGCGATAAAATTGCTGCGACCAAGATTATCTTCACAAATGGGTCAC 1308
Query 1010 AAGATCCATGGCGTCATGCTTCCAAACAGAAC-TCATCTCATGAAATGCCTTCTTACATC 1068
| ||||||||||||||||| |||||||| ||| ||||||| ||| ||||||| ||||||
Sbjct 1309 AGGATCCATGGCGTCATGCATCCAAACA-AACCTCATCTCCTGACCTGCCTTCGTACATC 1367
Query 1069 ATAAAATGTCGTAACTGTGGCCATGGAACTGATATAAGAGGATGCCCTCAATCTCCAATG 1128
|| | |||| |||||||| ||||||| |||| | |||||||||| |||||| |||||
Sbjct 1368 ATGACTTGTCACAACTGTGGGCATGGAAGTGATCTTCGAGGATGCCCCCAATCTGCAATG 1427
Query 1129 GTCATTGAAGGTAAAT-CAAATAATTGCAGCTT-ACCAGATT-ATGTAAACAAAGTAAGG 1185
|||||||||||| | | | | |||||||| || ||||||| | || |||||||| |||
Sbjct 1428 GTCATTGAAGGTGA-TGCCCAGAATTGCAG-TTCACCAGATGCA-GTGAACAAAGTGAGG 1484
Query 1186 CAACAAATGGTAGAACATATTGACTTGTGGTTGTCTGAGTGTCG 1229
||||| ||| || |||| || ||||||||| | |||||||||||
Sbjct 1485 CAACATATGATAAAACACATCGACTTGTGGCTCTCTGAGTGTCG 1528
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61646269260
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5