BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480735 Length=1960 Score E Sequences producing significant alignments: (Bits) Value AT2G18280.1 | Symbols: AtTLP2, TLP2 | tubby like protein 2 | ch... 2209 0.0 AT2G18270.1 | Symbols: | unknown protein; Has 2 Blast hits to ... 327 2e-88 AT2G18290.1 | Symbols: APC10 | anaphase promoting complex 10 | ... 163 5e-39 > AT2G18280.1 | Symbols: AtTLP2, TLP2 | tubby like protein 2 | chr2:7945999-7948446 FORWARD LENGTH=1900 Length=1900 Score = 2209 bits (1196), Expect = 0.0 Identities = 1388/1481 (94%), Gaps = 11/1481 (1%) Strand=Plus/Plus Query 440 ATTGCAGTTATTGGGGAGTTTTGTGGTATGCTGAAAAGAGATGTCTTTGAAAAGCATCCT 499 |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 ATTG-AGCTATCGGGGAGTTTTGTGGTATGCTGAAAAGAGATGTCTTTGAAAAGCATCCT 465 Query 500 TCGTGATTTGAAGGAAGTGAGAGATGGACTTGGAGGCATCTCCAAGCGAAGCTGGTCAAA 559 ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 466 TCGTGATCTGAAGGAAGTGAGGGATGGACTTGGAGGCATCTCCAAGAGAAGCTGGTCAAA 525 Query 560 GTCGTCTCACATTGCTCCTGATCAAACAACTCCACCACCGGAAAACATCCCGCAGAGCCC 619 |||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||| Sbjct 526 GTCGTCTCACATTGCTCCTGATCAAACAACTCCACCACTGGATAACATACCACAGAGCCC 585 Query 620 ATGGGCTTCGTTACCACCTGAGTTGCTTCATGACATTATCCGGAGGGTTGAAGAGAGTGA 679 ||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 586 ATGGGCTTCTTTGCCGCCTGAGTTGCTTCATGACATTATCTGGAGGGTTGAAGAGAGTGA 645 Query 680 GACTGCTTGGCCCGCTCGAGCTGCTGTTGTCTCTTGTGCTTCTGTCTGTAAATCATGGAG 739 ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct 646 GACAGCTTGGCCCGCTCGAGCTGCCGTTGTCTCTTGTGCTTCAGTATGTAAATCATGGAG 705 Query 740 AGGAATCACTATGGAGATTGTGAGGATCCCTGAGCTGTGTGGGAAGCTCACTTTTCCAAT 799 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 706 AGGAATCACTATGGAGATTGTGAGGATCCCTGAGCAGTGTGGGAAGCTCACTTTTCCAAT 765 Query 800 CTCATTAAAACAGCCGGGGCCGCGAGACTCTCCAATTCAATGCTTTATTAAGAGGAACAG 859 |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 766 CTCATTGAAACAGCCGGGGCCTCGAGACTCTCCAATTCAATGTTTTATTAAGAGGAACAG 825 Query 860 AGCAACAGCTACATACATTCTCTATTATGGTTTGATGCCTTCTGAGACAGAGAACGACAA 919 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 826 AGCAACAGCTACATACATTCTCTATTATGGTTTGATGCCTTCGGAGACTGAGAACGACAA 885 Query 920 ACTGTTGTTAGCAGCAAGAAGGATTAGAAGAGCGACGTGCACGGACTTTATAATCTCGCT 979 |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct 886 ACTGTTGTTAGCAGCAAGAAGGATTAGAAGAGCGACATGCACAGACTTTATAATCTCCCT 945 Query 980 ATCGGCGAAA-AACTTCTCACGGAGCAGCAGCACATATGTTGGCAAACTAAGGTCTGGTT 1038 ||| || ||| |||||||||||||||||||| || |||||||||||| |||||||||||| Sbjct 946 ATCTGC-AAAGAACTTCTCACGGAGCAGCAGTACTTATGTTGGCAAATTAAGGTCTGGTT 1004 Query 1039 TTCTGGGAACCAAGTTCACAATATATGACAACCAAACAGCATCATCCACAACACAAGGCC 1098 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1005 TTCTGGGAACCAAGTTCACAATATATGACAACCAAACAGCATCATCCACAGCACAAGCCC 1064 Query 1099 AACCTAACCGAAGACTTCACCCCAAGCAAGCGGCCCCAAAAGTACCTGCTAATAGCTCTA 1158 |||||||||||||||| ||||| || |||||||| || ||| ||||| | |||||||||| Sbjct 1065 AACCTAACCGAAGACTCCACCCGAAACAAGCGGCTCCTAAACTACCTACGAATAGCTCTA 1124 Query 1159 CTGTAGGAAATGTAACCTATGAGCTCAATGTTCTTCGCACAAGGGGACCTAGAAGAATGC 1218 | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1125 CCGTAGGAAACATAACCTACGAGCTCAATGTTCTTCGCACAAGGGGACCTAGAAGAATGC 1184 Query 1219 ATTGCGCTATGGATTCTATACCCCTCTCTTCTGTTATTGCTGAACCATCAGTAGTTCAAG 1278 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1185 ACTGCGCTATGGATTCTATACCCCTCTCTTCTGTTATTGCTGAACCGTCAGTAGTTCAAG 1244 Query 1279 GCCTAGAGGAGGAAGTCTCTTCCTCGCCTTCACCAAAAGGAGAAACCAGCACAACAGACA 1338 || |||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1245 GCATAGAAGAGGAAGTCTCTTCCTCTCCTTCACCAAAAGGAGAAACCATCACAACAGACA 1304 Query 1339 AAGAGGTACCTGAT-ATTACTCCAAGCTTAAGGGACCAGCCGCTAGTTCTCAAAAACAAA 1397 ||||| | |||||| ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 1305 AAGAGATTCCTGATAATT-CTCCAAGCTTAAGGGACCAACCGCTAGTTCTCAAAAACAAA 1363 Query 1398 TCCCCAAGATGGCACGAGCAATTGCAGTGTTGGTGCCTCAACTTCAAGGGAAGAGTGACC 1457 |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 1364 TCCCCAAGATGGCATGAGCAGTTGCAGTGCTGGTGCCTCAACTTCAAGGGAAGAGTGACT 1423 Query 1458 GTGGCTTCAGTCAAGAATTTCCAGCTTGTTGCAGACATTGACGCTGCTTTGGTTGCGCCG 1517 ||||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||| Sbjct 1424 GTGGCTTCAGTTAAGAATTTCCAGCTTGTTGCAGAGATTGACGCTTCTTTGGATGCGCCG 1483 Query 1518 CGTGAAGAACATGAGAGGGTGATCTTACAGTTTGGCAAAATAGGTAAGGACATTTTTACC 1577 | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct 1484 CCTGAAGAACATGAGAGGGTGATCTTACAGTTTGGCAAAATCGGTAAGGATATTTTCACC 1543 Query 1578 ATGGATTATCGCTACCCTCTCTCTGCTTTCCAAGCCTTTGCTATATGCATCAGCAGCTTT 1637 |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct 1544 ATGGATTATCGCTACCCTCTATCTGCTTTTCAAGCCTTTGCTATATGCATTAGCAGCTTT 1603 Query 1638 GACACCAAACCGGCATGTGAAGGGTAAA-GTTAA--C-CCGAGTTAAATCCATCTCTGCA 1693 |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct 1604 GACACCAAACCGGCATGTGAAGGGTAAACTTTAACCCACCGAGTTAAATCCATCTCTGCA 1663 Query 1694 AATCATCATAGAAGGCTTTTCTTATCTTTAGGTTTCAATGTATCAATCCACGAAAAGCTC 1753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1664 AATCATCATAGAAGGCTTTTCTTATCTTTAGGTTTCAATGTATCAATCCACGAAAAGCTC 1723 Query 1754 TTTGTATGTAGATTGTTGTAGCTCTTTTGAACTATGCTTTAAACCCATCTCTCCAAATTC 1813 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||| || Sbjct 1724 TTTGTATGTAGATTGTTGTAGCTCTTTTGAACTATGCTTTAAATCCGTATCTCCAAAATC 1783 Query 1814 ACCATGTCAAAAGTTTGATGG-GGCTTTTGGTGGATAAGCTTAATGAAGTTATGATTGTT 1872 || ||||||| |||| |||| || | ||||| |||||||||| |||||||||||||||| Sbjct 1784 ACTGTGTCAAATGTTTTATGGAGG-TCTTGGTTGATAAGCTTACTGAAGTTATGATTGTT 1842 Query 1873 ATATCCAATGTAATATATAAACAGAAGCCATTACACAACAA 1913 ||||||||||||||||||||||| |||||||| |||||||| Sbjct 1843 ATATCCAATGTAATATATAAACAAAAGCCATTGCACAACAA 1883 Score = 568 bits (307), Expect = 1e-160 Identities = 370/399 (93%), Gaps = 10/399 (3%) Strand=Plus/Plus Query 1 GAGTTTCTCTCTGCCTTTAAACGTTTGTTTGAAAACTATAAGAAACAGCGAAGACTTCGG 60 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 2 GAGTTTCTCTCTGCCTTTAAACGTTTCATTGAAAACTATAAGAAAAAGCGAAGACTTCGG 61 Query 61 ATCCTTTTTTCTCTCAATTTGTAAGAAGAGAGAGAGGTTCAGGTTCG-TTTGGTGGAGAC 119 ||||||| || ||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct 62 ATCCTTTCTT-TCTCAATTTGTAACAAGAGAGAGAGGTTCAGGTTCGTTTTGGTGGTGAC 120 Query 120 CACTCCTTTTATTCACCTACGGTGAGATCGGCGGCGGAGTC-AGAAGACGGCGATAACGC 178 |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 121 CACTCC-TTTATTCACCTACGGTGAGATCGGCGGCGGAGTCTAGACGACGGCGATAACGC 179 Query 179 CGGTGACGGACGGAATCATGTCAAGATAGTCGTCACTTGCGAATTCGTTCTTCTT-CCCG 237 ||||||| ||||||||||||| |||||| |||||| ||||||||||||||||| |||| Sbjct 180 CGGTGACCGACGGAATCATGTTAAGATA---GTCACTGGCGAATTCGTTCTTCTTCCCCG 236 Query 238 GAGACGACGAGCATCGAAGAATCTGTCAAGAAACAGCTATGCTTGTCTCTGTTTCTGCGT 297 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 237 GAGACGACAAGCATCGAAGAATCTGTTTAGAGACAGCTATGCTTGTCTCTGTTTCTGCGT 296 Query 298 TTTCTCTCTCCGATCTTGTCTCTCGGATCCGGTGAAGAAGCCGCCGCTGATCTCATCTTC 357 ||||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||||||| Sbjct 297 TTTCTCTTTCCGATCTTGTCTCTCGGATCCGGTGAAGAAGCTGCCGCCGATCACATCTTC 356 Query 358 CAGTTTCCAGAGATT-TCAAAGTTTTTGTCTTTTGATCC 395 ||||||||||||||| | |||| |||||||||||||||| Sbjct 357 CAGTTTCCAGAGATTCT-AAAGCTTTTGTCTTTTGATCC 394 > AT2G18270.1 | Symbols: | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:7946158-7946406 REVERSE LENGTH=249 Length=249 Score = 327 bits (177), Expect = 2e-88 Identities = 218/237 (92%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 161 AGAAGACGGCGATAACGCCGGTGACGGACGGAATCATGTCAAGATAGTCGTCACTTGCGA 220 ||| ||||||||||||||||||||| ||||||||||||| |||||| |||||| |||| Sbjct 247 AGACGACGGCGATAACGCCGGTGACCGACGGAATCATGTTAAGATA---GTCACTGGCGA 191 Query 221 ATTCGTTCTTCTT-CCCGGAGACGACGAGCATCGAAGAATCTGTCAAGAAACAGCTATGC 279 ||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct 190 ATTCGTTCTTCTTCCCCGGAGACGACAAGCATCGAAGAATCTGTTTAGAGACAGCTATGC 131 Query 280 TTGTCTCTGTTTCTGCGTTTTCTCTCTCCGATCTTGTCTCTCGGATCCGGTGAAGAAGCC 339 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 130 TTGTCTCTGTTTCTGCGTTTTCTCTTTCCGATCTTGTCTCTCGGATCCGGTGAAGAAGCT 71 Query 340 GCCGCTGATCTCATCTTCCAGTTTCCAGAGATT-TCAAAGTTTTTGTCTTTTGATCC 395 ||||| |||| |||||||||||||||||||||| | |||| |||||||||||||||| Sbjct 70 GCCGCCGATCACATCTTCCAGTTTCCAGAGATTCT-AAAGCTTTTGTCTTTTGATCC 15 > AT2G18290.1 | Symbols: APC10 | anaphase promoting complex 10 | chr2:7948306-7950329 REVERSE LENGTH=1028 Length=1028 Score = 163 bits (88), Expect = 5e-39 Identities = 146/172 (85%), Gaps = 11/172 (6%) Strand=Plus/Minus Query 1790 CTTTAAACCCATCTCTCCAAATTCACCATGTCAAAAGTTTGATGG-GGCTTTTGGTGGAT 1848 ||||||| || | |||||||| |||| ||||||| |||| |||| || | ||||| ||| Sbjct 1028 CTTTAAATCCGTATCTCCAAAATCACTGTGTCAAATGTTTTATGGAGG-TCTTGGTTGAT 970 Query 1849 AAGCTTAATGAAGTTATGATTGTTATATCCAATGTAATATATAAACAGAAGCCATTACAC 1908 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 969 AAGCTTACTGAAGTTATGATTGTTATATCCAATGTAATATATAAACAAAAGCCATTGCAC 910 Query 1909 AACAATATGTGAAACTATAACTAATCTGATTATAGACTCTTCCTGTGGTATC 1960 ||||| | | || | |||||||||||||||||||||| ||||||||| Sbjct 909 AACAACA----A---TA-A-CTAATCTGATTATAGACTCTTCATGTGGTATC 867 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97087854030 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5