BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480742
Length=2073
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18330.1 | Symbols: | AAA-type ATPase family protein | chr2... 3249 0.0
AT4G36580.1 | Symbols: | AAA-type ATPase family protein | chr4... 1661 0.0
> AT2G18330.1 | Symbols: | AAA-type ATPase family protein | chr2:7965635-7969105
FORWARD LENGTH=2295
Length=2295
Score = 3249 bits (1759), Expect = 0.0
Identities = 1995/2104 (95%), Gaps = 36/2104 (2%)
Strand=Plus/Plus
Query 1 TCATAACCTAGCCACCGTGGGGTTTATGCTCGTACCTGCCGGAGAAACTTTTCCGACGAC 60
|||||||||||||||||| ||||||||||||| ||| ||||||| || |||||||||||
Sbjct 15 TCATAACCTAGCCACCGT-GGGTTTATGCTCGGGCCTACCGGAGAGACATTTCCGACGAC 73
Query 61 TATCCACAACCATTTCCGCAAACCTTGAGAGCACCATTTTCTCATTCCGAAATGTTTGAA 120
| | ||||| |||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 74 TGTGCACAATCATTTCTATTAACCTTGAGAGTACCATTTTCTCATTCCGAAATGTTTGAA 133
Query 121 TTGTAAAAGGACTTCTGTTTCTTGC--------T-------TG--TTTTAGTCGCATTTC 163
|||||||||||||| |||||||||| | || ||||||||| |||||
Sbjct 134 TTGTAAAAGGACTTTTGTTTCTTGCTTGGGGTTTAGGAGGCTGCTTTTTAGTCGTATTTC 193
Query 164 AATGGCTGCTTCTAGATTATGTTCGGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTC 223
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 194 AATGGCTGCTTCTAGATTATGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTC 253
Query 224 GATGTCACAGAACCGCGCTTACGCTGACTCGCGATTTCGCTTTCCTTTCTTCTCTTCTTC 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 GATGTCACAGAACCGCGCTTACGCTGACTCGCGATTTCGCTTTCCTTTCTTCTCTTCTTC 313
Query 284 ACCTCCGGCAGAAGAATCTCCAACCGATCAAAAG---TCTTC--A-TC-GAAT--GAGAC 334
|||||||||||||||||||||||||||||| ||| ||||| | || ||| |||||
Sbjct 314 ACCTCCGGCAGAAGAATCTCCAACCGATCATAAGTCTTCTTCGAATTCTAAATCGGAGAC 373
Query 335 TAAACCTGACTCCGATGAACCTAAAGGATCTGGTTTCGATCCTGAGTCTTTGGAAAGAGG 394
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 374 TAAACCTGACTCCGATGAGCCTAAAGGATCTGGTTTCGATCCTGAGTCATTGGAAAGAGG 433
Query 395 TGCTAAAGCTCTTCGTGAAATCAACAGCTCTCCTCATTCGAAACAGGTGTTTGATCTAAT 454
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 434 TGCTAAAGCTCTTCGTGAAATCAATAGCTCTCCTCATTCCAAACAGGTGTTTGATCTAAT 493
Query 455 GCGAAAGCAGGAGAAAACTCGATTAGCTGAATTAGCTGCTGAGAAAGAACATAATGAAGC 514
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 494 GCGAAAGCAGGAGAAGACTCGATTAGCTGAATTAGCGGCTGAGAAAGAACATAATGAAGC 553
Query 515 TATTCAAGCTCA-CAAGGACATTGAAAGACAGCGGAAATTGGCTGAGGATCAGAGAAATT 573
|||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 554 TATTCAAGCT-AGCAAGGACATTGAAAGACAGCGGAAATTGGCAGAGGATCAGAGAAATT 612
Query 574 TAGTGCAGCAACAGGCACAAGCGAAAGCGC-AAATGC-TACGATATGAGGATGAGTTGGC 631
|||||||||||||||| ||||||||||||| |||| | || |||||||||||||||||||
Sbjct 613 TAGTGCAGCAACAGGCCCAAGCGAAAGCGCAAAAT-CTTA-GATATGAGGATGAGTTGGC 670
Query 632 AAGGAAGAGAATGCAGACAGATAATGAAGCTCAGAGACGGCATAATGCTGAATTGGTTTC 691
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 CAGGAAGAGAATGCAGACAGATAATGAAGCTCAGAGACGGCATAATGCTGAATTGGTTTC 730
Query 692 GATGCAAG-AGGAGTCTTCTATACGGAAAGAGAAAGCAAGAATTGCCACGGAACAACAGA 750
|||||||| || | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 731 GATGCAAGAAGCA-TCTTCTATACGGAAAGAGAAAGCAAGAATTGCCACGGAAGAACAGA 789
Query 751 TTCAAGCACAGCAGCGCCAGACTGAGAAAGAGAGAGCTGAACTTGAGAGAGAAACAATTC 810
||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 790 TTCAAGCACAGCAGCGCGAGACTGAGAAAGAGAGAGCGGAACTTGAGCGAGAAACAATTC 849
Query 811 GCGTTAAGGCCATGGCTGAGGCTGAAGGCCGAGCTCATGAAGCTAAACTTACTGAGGAGC 870
|||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 850 GCGTGAAAGCTATGGCTGAGGCTGAAGGCCGAGCTCATGAAGCTAAACTCACTGAGGAGC 909
Query 871 AGAATAGAAGAATGCTTCTGGATAAGATTAATGGTGAAAGGGAGAAATGGCTTGCAGCAA 930
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 910 AGAATAGAAGAATGCTTCTAGATAAGATAAATGGTGAAAGGGAGAAATGGCTTGCAGCAA 969
Query 931 TCAACACAACTTTCAGTCATATTGAAGGAGGAGTAAGGACCTTATTAACTGATCGAAGTA 990
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 970 TCAACACGACTTTCAGTCACATTGAAGGAGGAGTAAGGACCTTATTAACTGATCGAAGTA 1029
Query 991 AATTGATTATGACTGTTGGAGGAATTACGGCATTAGCTGCTGGGGTTTACACAACTCGAG 1050
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1030 AATTGATTATGACTGTTGGAGGAGTTACGGCATTAGCCGCTGGGGTTTACACAACTCGAG 1089
Query 1051 AGGGTGCTAGGGTTACCTGGGGTTATATTAACAGAATTCTTGGGCAGCCATCACTGATCA 1110
| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1090 AAGGTGCTAGGGTTACCTGGGGTTATATCAATAGAATTCTTGGGCAGCCATCACTGATCA 1149
Query 1111 GAGAATCGTCCATGGGTAGATTCCCATGGGCAGGCTCAGTGTCTCAGTTTAAGAACAAAC 1170
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 GAGAATCTTCCATGGGCCGATTCCCATGGGCAGGCTCAGTGTCTCAGTTTAAGAACAAAC 1209
Query 1171 TTAGCACAGCTGCAGGGGCCGCAGCATCTGCAGAAGGAGAAAAGCCCCTTGAAAATGTAA 1230
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1210 TTAGCACAGCTGCAGGGGCAGCAGCATCTGCAGAAGGAGAAAAGCCTCTTGAAAATGTAA 1269
Query 1231 TTCTCCATCGTTCTTTGAAGACGAGAATTGAGCGTCTTGCAAGAGCCACAGCAAATACCA 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1270 TTCTCCATCGTTCTTTGAAGACGAGAATTGAGCGTCTTGCAAGAGCCACAGCAAATACCA 1329
Query 1291 AGTCCCATAAAGCACCATTCCGAAACATGATGTTTTATGGGCCTCCTGGTACTGGAAAAA 1350
|||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1330 AGTCACATAAAGCACCATTCCGAAACATGATGTTTTATGGGCCTCCAGGTACCGGAAAAA 1389
Query 1351 CTTTGGTGGCGAGGGAGATTGCTCGGAAATCGGGTCTTGATTATGCTATGATGACAGGAG 1410
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1390 CTATGGTGGCGAGGGAGATTGCTCGGAAGTCGGGTCTTGATTATGCTATGATGACAGGAG 1449
Query 1411 GAGATGTTGCTCCTCTTGGTGCACAGGCTGTTACAAAGATCCATGAAATATTTGATTGGG 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 GAGATGTTGCTCCTCTTGGTGCACAGGCTGTTACAAAGATCCATGAAATATTTGATTGGG 1509
Query 1471 CTAAGAAATCAAACAAAGGGTTACTGCTTTTCATCGATGAAGCTGATGCTTTCCTATGCG 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 CTAAGAAATCAAACAAAGGGTTACTGCTTTTCATCGATGAAGCTGATGCTTTCCTATGCG 1569
Query 1531 AACGTAACAGCACGTACATGAGTGAGGCTCAGCGCAGCGCTCTGAACGCGTTGCTCTTTC 1590
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 AACGTAACAGCACTTACATGAGTGAGGCTCAGCGCAGCGCTCTGAACGCGTTGCTCTTTC 1629
Query 1591 GAACCGGTGATCAATCACGGGACATAGTTCTTGTCCTGGCTACAAACAGACCCGGAGATC 1650
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1630 GAACCGGTGATCAATCGCGGGACATAGTCCTTGTCCTGGCTACAAACAGACCTGGAGATC 1689
Query 1651 TGGACAGTGCAGTCACTGACAGGATCGACGAAGTAATCGAGTTTCCTCTCCCTGGTGAAG 1710
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1690 TCGACAGTGCAGTCACTGACAGGATCGACGAAGTTATCGAGTTTCCTCTCCCTGGTGAAG 1749
Query 1711 AAGAACGCTTCAAGCTCCTCAAGCTCTATCTCAACAAGTACCTAATGGGTGAAGACAAGA 1770
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1750 AAGAACGCTTCAAGCTCCTCAAGCTCTATCTCAACAAGTACCTAATGGGTGACGACAAGA 1809
Query 1771 AAGGTGAGAAAAACTCGAACCTTAAATGGAGCAACTTGTTCAAGAAGAAGAAGTCACAGA 1830
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 AAGGTGAGAAAGACTCAAACCTTAAATGGAGCAACTTGTTCAAGAAGAAGAAGTCACAGA 1869
Query 1831 AGATAACCATTGAAGGAGACCTAACCGACCAAGTGATCAAAGAAGCTGCAAAAAAGACAG 1890
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1870 AGATAACCATTGAAGGAGACCTAACCGACCAAGTGATTAAAGAAGCTGCAAAAAAGACAG 1929
Query 1891 AAGGCTTCTCTGGTCGTGAAATCGCTAAGCTTGTCGCCGGTGTTCAAGCTGCGGTATACG 1950
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1930 AAGGCTTTTCTGGTCGTGAAATCGCTAAGCTTGTCGCCGGTGTTCAAGCTGCGGTATATG 1989
Query 1951 GACGACCGGATTGCGTCTTGGATTCCCAGCTTTTTGAAGAGATTGTGGATTATAAAATCG 2010
|||||| |||||| |||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 1990 GACGACAGGATTGTGTCTTGGATTCCCAACTTTTTGAAGAAATTGTGGATTATAAGATCG 2049
Query 2011 AAGAACATCACCAGAGAATCAGACTTGCGACTGAAGGTGGCCAATCGTTTGCGTAGAT-T 2069
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 2050 AAGAACATCACCAGAGAATCAGACTTGCGACTGAAGGTGGCCAATCGTTTCCGTAGATCT 2109
Query 2070 TTTT 2073
||||
Sbjct 2110 TTTT 2113
> AT4G36580.1 | Symbols: | AAA-type ATPase family protein | chr4:17257945-17260775
FORWARD LENGTH=2026
Length=2026
Score = 1661 bits (899), Expect = 0.0
Identities = 1577/1895 (83%), Gaps = 83/1895 (4%)
Strand=Plus/Plus
Query 165 ATGGCTGCTTCTAGATTATGTTCGGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTCG 224
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 14 ATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTCA 73
Query 225 ATGTCACAGAACCGCGCTTACGCTGA--CT-CGCGATTTCGCTTTCCTTTCTT--CT-CT 278
||||| |||||||| |||||||| || || | ||||| || ||||||||||| || ||
Sbjct 74 ATGTCTCAGAACCGTGCTTACGCCGATTCTTCTCGATTCCGGTTTCCTTTCTTTTCTTCT 133
Query 279 TCT--T-CACCTCCGGCAGA-AGAATCTCCAACCGA-TCAAAAGTCTTCATCGAATGAGA 333
||| | | ||||| | | ||| ||||| | || |||| ||||||||||| |
Sbjct 134 TCTCCTTCTCCTCCTCC-GTCAGATTCTCCGGC-GAATCAA---TCTTCATCGAA-GT-- 185
Query 334 CTAAACCTGACTCC-GATGAACCTAAAGGATCTGGTTTCGATCCTGAGTCT-TTGGAAAG 391
||||| | || || ||||| ||||||||||| ||||| ||||||||| || ||| | ||
Sbjct 186 CTAAAGCAGAG-CCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGGCTCTTG-AGAG 243
Query 392 AGGTGCTAAAGCTCTTCGTGAAATCAACAGCTCTCCTCATTCGAAACAGGTGTTTGATCT 451
|| ||||||||||||| | || ||||| |||||||| ||||| || ||||||||||||||
Sbjct 244 AGCTGCTAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAGCAGGTGTTTGATCT 303
Query 452 AATGCGAAAGCAGGAGAAAACTCGATTAGCTGAATTAGCTGCTGAGAAAGAACATAATGA 511
||| | ||||||||||||||||| |||||||||||| | || |||| ||| | ||
Sbjct 304 CATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAACGGCAGAGACTTCTCATTACGA 363
Query 512 AGCTATTCAAGCTCACAAGGACATTGAAAGACAGCGGAAATTGGCTGAGGATCAGAGAAA 571
|||||||||||| ||||| || |||| ||||||| ||||||||||||||| ||||||||
Sbjct 364 AGCTATTCAAGCACACAATGATATTGGCAGACAGCAGAAATTGGCTGAGGACCAGAGAAA 423
Query 572 T-TTAGTGCAG-CAACAGGCACAAGCGAAAGCGCAAA-TGCTACGATATGAGGATGAGTT 628
| || ||||| || ||||| ||| | |||||||||| | || |||||||||||||| ||
Sbjct 424 TCTTT-TGCAGACA-CAGGCGCAAACCAAAGCGCAAAAT-CTGCGATATGAGGATGAATT 480
Query 629 GGCAAGGAAGAGA-ATGCAGACAGATAATGAAGCTCAGAGACGGCATAATGCTG-AATTG 686
||| || |||||| | |||||||||| ||||||||||||| | ||||||| || |||||
Sbjct 481 GGCCAGAAAGAGACA-GCAGACAGATCATGAAGCTCAGAGGCATCATAATG-TGGAATTG 538
Query 687 GTTTCGATGCAAGAGGAGTCTTCTAT-ACGGAAAGAGAAAGCAAGAATTGCCACGGAACA 745
||| ||||||||||| ||||||||| | |||||||||| |||| ||| ||||| ||| |
Sbjct 539 GTTAAGATGCAAGAGGCGTCTTCTATCA-GGAAAGAGAAGGCAAAAATCGCCACAGAAGA 597
Query 746 ACAGATTCAAGCACAGCAGCGCCAGACTGAGAAAGAGAGAGCTGAACTTGAGAGAGAAAC 805
|||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| |||| ||
Sbjct 598 ACAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGAC 657
Query 806 AATTCGCGTTAAGGCCATGGCTGAGGCTGAAGGCCGAGCTCATGAAGCTAAACTTACTGA 865
||||| || |||||||||||||| |||||||| || ||||||||||| |||||||||||
Sbjct 658 GATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACTGA 717
Query 866 GGAGCAGAATAGAAGAATGCTTCTGGATAAG-ATTAATGGTGAAAGGGAGAAATGGCTTG 924
||||| || |||||| ||||| |||| ||| |||||||||||||| ||||| |||||||
Sbjct 718 AGAGCAAAACAGAAGATTGCTTATGGA-AAGGATTAATGGTGAAAGAGAGAAGTGGCTTG 776
Query 925 CAGCAATCAACACAACT-TTCAGTCATATTGAAGGAGGAGTAAGGACCTTATTAACTGAT 983
| ||||||||||||| | |||||||| || ||||| ||| | ||||||||||||||||||
Sbjct 777 CTGCAATCAACACAA-TGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACTGAT 835
Query 984 CGAAGTAAATTGATTATGACTGTTGGAGGAATTACGGCATTAGCTGCTGGGGTTTACACA 1043
|||| ||| |||||||||||||||||||| ||| ||||||||||| |||||||| |||
Sbjct 836 CGAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGGTTTATACA 895
Query 1044 ACTCGAGAGGGTGCTAGGGTTACCTGGGGTTATATTAACAGAATTCTTGGGCAGCCATCA 1103
||||| || || ||||| ||||| |||||||||||||| || || ||||| || || |||
Sbjct 896 ACTCGTGAAGGAGCTAGAGTTACATGGGGTTATATTAATAGGATGCTTGGACAACCGTCA 955
Query 1104 CTGAT-CAGAGAATCGTCCATGGGTAGATTCCCATGGGCAGGCTCAGTGTCTCAGTTTAA 1162
|| || | ||||||| |||||| ||||||| |||||| |||||||||||||||| |||||
Sbjct 956 CTTATTC-GAGAATCTTCCATGCGTAGATTTCCATGGACAGGCTCAGTGTCTCAATTTAA 1014
Query 1163 GAACAA-A-CTTAGCACAGCTGCAGGGGCCGCAGCATCTGCAGAAGG-AGAAAAGCCCCT 1219
||||| | || || ||||||| || | ||| |||||||| | ||||||| ||
Sbjct 1015 GAACAGGATCTCAGGG--GCTGCAGCAGCTTCTGCA---GCAGAAGGCA-AAAAGCCGCT 1068
Query 1220 TGAAAATGTAATTCTCCAT-CGTTCTTTGAAGACGA-GAATTGAGCGTCTTGCAAGAGCC 1277
||| ||||||||||||||| | ||||||||||| | |||| |||||||| || |||||
Sbjct 1069 TGATAATGTAATTCTCCATAC-TTCTTTGAAGAA-ACGAATCGAGCGTCTCGCTAGAGCT 1126
Query 1278 ACAGCAAATACCAAGTCCCATAAAGCACCATTCCGAAACATGATGTTTTATGGGCCTCCT 1337
|||||||| ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct 1127 ACAGCAAACACCAAATCCCATCAAGCACCATTCCGCAACATGATGTTTTATGGACCTCCT 1186
Query 1338 GGTACTGGAAAAACTTTGGTGGCGAGGGAGATTGCTCGGAAATCGGGTCTTGATTATGCT 1397
||||| || |||||| ||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct 1187 GGTACCGGTAAAACTATGGTGGCAAGGGAAATAGCTCGGAAATCGGGTCTGGATTATGCT 1246
Query 1398 ATGATGACAGGAGGAGATGTTGCTCCTCTTGG--TGCACAGGCTGTTAC-AAAGATCCAT 1454
|||||||||||||| ||||||||||| ||||| | |||| |||||||| ||| ||||||
Sbjct 1247 ATGATGACAGGAGGTGATGTTGCTCC-CTTGGGAT-CACAAGCTGTTACTAAA-ATCCAT 1303
Query 1455 GAAATATTTGATTGGGCTAAGAAATCAAACAAAGGGTTACTGCTTTTCATCGATGAAGCT 1514
| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct 1304 CAGATATTTGATTGGGCTAAGAAATCGAACAAAGGCTTACTTCTTTTCATTGATGAAGCC 1363
Query 1515 GATGCTTTCCTATGCGAACGTAACAGCACGTACATGAGTGAGGCTCAGCGCAGCGCTCTG 1574
|||||||| |||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct 1364 GATGCTTTTCTATGCGAGCGTAACAGCACTTACATGAGTGAGGCTCAACGTAGTGCTCTG 1423
Query 1575 AACGCGTTGCTCTTTCGAACCGGTGATCAATCACGGGACATAGTTCTTGTCCTGGCTACA 1634
||||| |||||||| ||||| ||||||||||| |||||||| ||||||||| ||||||||
Sbjct 1424 AACGCTTTGCTCTTCCGAACTGGTGATCAATCTCGGGACATTGTTCTTGTCTTGGCTACA 1483
Query 1635 AACAGACCCGGAGATCTGGACAGTGCAGTCACTGACAGGATCGACGAAGTAATCGAGTTT 1694
||||||| |||||||| || ||||| || || |||||||| || ||||| || |||||
Sbjct 1484 AACAGACGTGGAGATCTCGATAGTGCGGTTACAGACAGGATTGATGAAGTCATTGAGTTC 1543
Query 1695 CCTCTCCCTGGTGAAGAAGAACGCTTCAAGCTCCTCAAGCTCTATCTCAACAAGTACCTA 1754
|| || || || ||||||||||| |||||||| ||||| |||||||||||||| || |||
Sbjct 1544 CCACTTCCAGGGGAAGAAGAACGTTTCAAGCTTCTCAATCTCTATCTCAACAAATATCTA 1603
Query 1755 A---TGGGTGA-AGACAA-GAAAGGTGAGAAAAACTCGAACCTTAAATGGAG-CAACTTG 1808
| ||||||| | |||| ||| | | |||| | |||| | ||||| || |||
Sbjct 1604 AAGATGGGTGATA-ACAACGAA-GAC-ACAAAA-C-CGAA----A--TGGAGTCAT-TTG 1651
Query 1809 TTCAAGAAGAAGAAGTCACAGAAGATAACCATTGAAGGAGACCTAACCGACCAAGTGATC 1868
|| |||||| | ||||||||||| ||| |||||| |||| |||| || |||||||
Sbjct 1652 TTTAAGAAGCTG---TCACAGAAGATTACCGTTGAAGAAGACTTAACTGATAAAGTGATT 1708
Query 1869 AAAGAAGCTGCAAAAAAGACAGAAGGCTTCTCTGGTCGTGAAATCGCTAAGCTTGTCGCC 1928
|| |||||||| ||||||||||| |||||||| ||||| || || |||||||| ||
Sbjct 1709 TCTGAGGCTGCAAAGAAGACAGAAGGATTCTCTGGCCGTGAGATTGCAAAGCTTGTGGCT 1768
Query 1929 GGTGTTCAAGCTGCG-GTATACGGACGACCGGATTGCGTCTTGGATTCCCAGCTTTTTGA 1987
|| || ||||||| | || ||||||||| ||||||| || |||||||| ||||||||| |
Sbjct 1769 GGAGTACAAGCTG-GAGTGTACGGACGAGCGGATTGTGTTTTGGATTCACAGCTTTTTAA 1827
Query 1988 AGAGATTGTGGATTATAAAATCGAAGAACATCACC 2022
||||||||| || ||||| | |||||||||||||
Sbjct 1828 AGAGATTGTTGAATATAAGGTTGAAGAACATCACC 1862
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102760515615
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5