BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480744
Length=1179
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18360.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1716 0.0
AT4G36610.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 665 0.0
> AT2G18360.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:7976712-7979377 REVERSE LENGTH=1234
Length=1234
Score = 1716 bits (929), Expect = 0.0
Identities = 1114/1199 (93%), Gaps = 29/1199 (2%)
Strand=Plus/Plus
Query 1 AAATAAGAACCCAACACCAAATACATTATAATTAATCCCAACTCAAAAAGCTTTTAAATC 60
||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||
Sbjct 7 AAACAAGAACCCAACACCAGATACATTATAATTAATCCCAACTCAAGAAGCTTTAAAATC 66
Query 61 TTCACCTTCCATTTGCTATTATATTCCATCTTCAAACATCTCTCT-CC-C--------TC 110
|||||||||||||||||||| | | ||||||| |||||||||| || | ||
Sbjct 67 TTCACCTTCCATTTGCTATT-GA-T-CATCTTCTTACATCTCTCTCCCTCTAAATATATC 123
Query 111 CAAACAAGAA--AAA-GAGTAA-A-T--ATACAATGGTGAACTTTGTGGATTCACAAAAA 163
|||||||||| ||| || || | | |||||||||||||||||||||||| |||||||
Sbjct 124 CAAACAAGAACGAAAGGAAAAAGAGTACATACAATGGTGAACTTTGTGGATTTACAAAAA 183
Query 164 CCATTGTTGTACCGTCTCATGAAATGGGCTGGTGTCATTCCGTACACCGTAGAGATTGAA 223
|||||||||||||| |||||||||| ||| ||||||||||| |||||||||||| |||||
Sbjct 184 CCATTGTTGTACCGCCTCATGAAATTGGCCGGTGTCATTCCTTACACCGTAGAGCTTGAA 243
Query 224 CCAGGGACGAAGATGAACTTCTGGATCCcaaaagaaaccctaaaaaagtccaaaaaatct 283
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 244 CCAGGGACAAAGATGAACTTCTGGATCCCAAAAGAAACCCTAAAAAAAACCAAAAAATCT 303
Query 284 gacaaaaactctgccgtggaaccccaaaaacctaccaaaccaGTCCTCTTGTTCATCCAC 343
|||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 304 GACAAAAACTTTGCCGTGGAACCCCAAAAACCTACGAAACCAGTCCTATTGTTCATCCAT 363
Query 344 GGCTTCGCAGCTGAAGGGATTGTGACGTGGCAGTTCCAGGTCGGATCCTTAGCCAAGAAG 403
||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 364 GGCTTTGCAGCCGAAGGGATCGTGACGTGGCAGTTCCAGGTCGGATCATTAGCCAAGAAG 423
Query 404 TACTCAGTCTATATACCGGACCTCCTCTTCTTTGGTGGGTCTTACTCCGACAACCCGGA- 462
||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||
Sbjct 424 TACTCAGTCTATATACCAGACCTCCTCTTCTTTGGTGGGTCCTACTCCGACAACGCGGAT 483
Query 463 CAGGTCACCAGCGTTCCAAGCCCACTGTTTAGTCAAGTCTCTTCGTATCCTCGGCGTGGA 522
| | ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||
Sbjct 484 C-GATCACCAGCGTTTCAAGCCCACTGTTTAGTCAAGTCTCTTCGTATCCTCGGTATCGA 542
Query 523 TAAGTTTGTC-CTTGTAGGGTTTAGTTACGGTGGCATGGTGGCTTTCAAGATAGCTGAGG 581
|||||| | ||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 543 AAAGTTT-ACTCTTGTAGGGTTTAGTTACGGTGGCATGGTTGCTTTCAAGATCGCCGAGG 601
Query 582 AGTACCCTGAGATGGTTCAAGCCATGGTGGTTTCAGGTTCGATACTCGCGATGACTGATA 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 AGTACCCTGAGATGGTTCAAGCCATGGTGGTTTCAGGTTCGATACTCGCGATGACTGATA 661
Query 642 CAATCAGTGAGTCTAATTTGAACCAGTTAGGGTTTAAGTCATCGGCGGATCTTTTGTTAC 701
| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 662 CGATCAGTGAGTCTAATTTGAACCAGTTAGGATTTAAGTCGTCGGCGGATCTTTTGTTAC 721
Query 702 CAACTTCGGTTAAAGGACTCAAGACTCTCTTTACCCTTGCTGTTCATAAACCCATGTGGT 761
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 722 CAACTTCGGTTAAAGGGCTCAAGACTCTCTTCACCCTTGCTGTTCATAAACCCATGTGGT 781
Query 762 TCCCGAATCGGCTCTTCAAGGATTTCATTGAGGTGATGATTACCAATAGGAAGGAAAGAG 821
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 782 TCCCGAAACGGCTCTTCAAGGATTTCATTGAGGTGATGATTACCAATAGGAAGGAAAGAG 841
Query 822 CAGAATTGTTGGAAGCTTTGGTCATCAGCAACAAAGATGTGACCATCCCTCGTTTTCAAC 881
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 842 CAGAATTGTTAGAAGCTTTGGTCATCAGCAACAAAGATGTGACAATCCCTCGTTTTCAAC 901
Query 882 AGAAAATCCATCTTCTGTGGGGCGAAAGTGATCAAATTTTTAACCTTGAATTTGCCAAGA 941
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 AGAAAATACATCTTCTGTGGGGCGAAAGTGATCAAATTTTTAACCTTGAATTTGCCAAGA 961
Query 942 GCATGAAAGAGCAACTAGGCGAAAATGCAACAATGGAGAGTATaaaaaaaGCAGGTCACT 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 GCATGAAAGAGCAACTAGGCGAAAATGCAACAATGGAGAGTATAAAAAAAGCAGGTCACT 1021
Query 1002 TGGCACATTTGGAGAGACCTTGTGTCTATAACAGACGTCTCAAAAAGTTTCTTGCTTCAG 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 TGGCACATTTGGAGAGACCTTGTGTCTATAACAGACGTCTCAAAAAGTTTCTTGCTTCAG 1081
Query 1062 TTTACTCCGAAAACTAAATTCGGTT-TAATTGATTCTCACATCAATGCCCAATGAATTTA 1120
||||||||||||||||| || || | |||| |||||||||||||| || ||||||||||
Sbjct 1082 TTTACTCCGAAAACTAATTT-GGATGTAATCGATTCTCACATCAACACCGAATGAATTTA 1140
Query 1121 TTTATCTTATTTCTTTGGTTGTAA-TTCTTCTGTCAAAAATAATGTAACCTGATATATT 1178
|||||||||||||||||||| | | ||||||| |||||| |||||||||||||||||||
Sbjct 1141 TTTATCTTATTTCTTTGGTT-TCAGTTCTTCTTTCAAAA-TAATGTAACCTGATATATT 1197
> AT4G36610.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr4:17265390-17267314 REVERSE LENGTH=1149
Length=1149
Score = 665 bits (360), Expect = 0.0
Identities = 770/964 (80%), Gaps = 43/964 (4%)
Strand=Plus/Plus
Query 134 ACAATGGTGAACTTTGTGGA-TTCACAAAAACCATTGTTGTACCGTCTCATG-AAATGGG 191
||||||||||||||||| || | ||||||||||||||||||| |||| ||| |||| ||
Sbjct 38 ACAATGGTGAACTTTGTTGAGGT-ACAAAAACCATTGTTGTACGGTCTGATGAAAAT-GG 95
Query 192 CTGGTGTCATTCCGTACACCGTAGAGATTGAACCAGGGACGAAGATGAACTTCTGGATCC 251
|||| ||| |||| ||||| ||||||| ||||||||||||||||| ||||| ||| |||
Sbjct 96 CTGGCGTCGTTCCTTACACTTTAGAGATCGAACCAGGGACGAAGATCAACTTTTGGGTCC 155
Query 252 caaaagaaaccctaaaaaagtccaaaaaat-ctg-a-c-aaaaactctgccgtggaaccc 307
| || |||||||| |||| || || | | | | | ||||| | | | |||||
Sbjct 156 CTAAGGAAACCCT---AAAG---AAGAATTCCGGTACCGGAAAAC-C-AAC--GAAACCC 205
Query 308 caaaaacctaccaaa-ccaGTCCTCTTGTTCATCCACGGCTTCGC-AGCTGAAGGGATTG 365
| ||||||| ||| || ||| ||||||| ||||| || ||||| || ||||| || |
Sbjct 206 GATAAACCTA-AAAAGCCTGTCGTCTTGTTAATCCATGGTTTCGCTGGC-GAAGGAATCG 263
Query 366 TGACGTGGCAGTTCCAGGTCGGAT-CCTTAGCCAAGAAGTACTCAGTCTATATACCGGAC 424
|||||||||||||||| ||||| | | ||| ||||||| ||||| ||||| |||||||||
Sbjct 264 TGACGTGGCAGTTCCAAGTCGG-TGCATTATCCAAGAAATACTCGGTCTACATACCGGAC 322
Query 425 CTCCTCTTCTTT-GGTGGGTCTTACTCCGACAACCCGGACAGGTCACCAGCGTTCCAAGC 483
|||||||| ||| ||||| || ||| |||||||| ||||| |||| || ||||| |||||
Sbjct 323 CTCCTCTT-TTTCGGTGGATCCTACACCGACAACTCGGACCGGTCTCCGGCGTTTCAAGC 381
Query 484 CCACTGTTTAGTCAAGTCTCTTCGTATCCTCGGCGTGGATAAGTTTGT-CCTTGTAGGGT 542
| ||||||| |||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct 382 CGACTGTTTGGTCAAGGGGCTTCGTATCCTCGGCGTGGATAAGTTTGTTCCC-GTAGGGT 440
Query 543 TTAGTTACGGTGGCATGGTGGCTTTCAAGATAGCTGAGGAGTACCCTGAGATGGTTCA-A 601
|||| ||||| |||||||||||||||||||| ||||| | ||||| || |||||| | |
Sbjct 441 TTAGCTACGGGGGCATGGTGGCTTTCAAGATCGCTGAAGCTTACCCGGACATGGTT-AGA 499
Query 602 GCCATGGTGGTTTCAGGTTCGATACTCGCGATGACTGATACAATCAGTGAGTCTAATTTG 661
|| || || || || |||||||| | | | ||||| ||||| || | |||| | | |||
Sbjct 500 GCAATCGTTGTGTCTGGTTCGATTCCCACAATGACCGATACCATTAATGAGGCGAGCTTG 559
Query 662 AACCAGTTAGGGTTTAAGT-CATCGGCGGATCTTTTGTTACCAACTTCGGTTAAAGGACT 720
|||| ||||||||||| || | || ||||||| |||||||| ||||| |||| |||||
Sbjct 560 AACCGGTTAGGGTTTA-GTTCTTCCACGGATCTCTTGTTACCGACTTCTGTTACGGGACT 618
Query 721 CAAGACTCTCTTTACCCTTGCTGTTCATAAACCCATGTGGTTCCCGAATCGGCTCTTCAA 780
||| ||||||| ||| ||||||| ||||||||| |||||||||| || || | |||||
Sbjct 619 TAAGGCTCTCTTCACCATTGCTGTGCATAAACCCTTGTGGTTCCCTAAACGATTGTTCAA 678
Query 781 GGATTTCATTGAGGTGATGATTACCAATAGGAAGGAAAGAGCAGAATTGTTGGAAGCT-T 839
|| | ||| ||||| ||| ||| ||| || || |||||||| ||| |||| || ||| |
Sbjct 679 AGACTACATCGAGGTAATGTTTAACAACAGAAAAGAAAGAGCTGAACTGTTAGAGGCTGT 738
Query 840 TGGTCATCAGCAACAAAGATGTGACCA-TCCCTCGTTTTCAACAGAAAATCCATCTTCT- 897
|| | |||||||||| || | | | | |||||| ||| | || |||||| ||| ||||
Sbjct 739 TG-TGGTCAGCAACAAGGAAGCG-CAAATCCCTCATTTCCCACGGAAAATACAT-TTCTT 795
Query 898 GTGGGGCGAAAGTGATCAAATTTTTAACCTTGAATTTGCCA-AGAGCATGAAAGAGCAAC 956
|||||| |||||||||||||| ||| | || ||||| || | ||| ||||||||| |||
Sbjct 796 GTGGGGTGAAAGTGATCAAATCTTTGATCTCGAATTGGCTAGAGA-CATGAAAGAACAAA 854
Query 957 TAGGCGAAAATGCAACAATGGAGAGTATaaaaaaaGCAGGTCACTTGGCACATTTGGAGA 1016
|||| || || |||||||| ||||||||||| || ||||| || |||| ||| ||||| |
Sbjct 855 TAGGTGAGAACGCAACAATAGAGAGTATAAAGAAGGCAGGCCATTTGGTACAATTGGAAA 914
Query 1017 GACCTTGTGTCTATAACAGACGTCTCAAAAAGTTTCTTGCTTC-AGTTTACTCCGAAAAC 1075
|||||||||| || || || |||||||||||||||||||| || | || |||| ||| |
Sbjct 915 GACCTTGTGTTTACAATAGGCGTCTCAAAAAGTTTCTTGCATCTA-TTCACTCGGAAGA- 972
Query 1076 TAAA 1079
||||
Sbjct 973 TAAA 976
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57881228385
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5