BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480752
Length=1907
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18450.1 | Symbols: SDH1-2 | succinate dehydrogenase 1-2 | c... 3070 0.0
AT5G66760.1 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 | c... 1496 0.0
> AT2G18450.1 | Symbols: SDH1-2 | succinate dehydrogenase 1-2 |
chr2:7997392-8000804 REVERSE LENGTH=2020
Length=2020
Score = 3070 bits (1662), Expect = 0.0
Identities = 1830/1912 (96%), Gaps = 7/1912 (0%)
Strand=Plus/Plus
Query 1 GAGATGTGGCGGTGCCTTCGAGTTGCATCGT-G--GAGGAGATCGGAATCTAATGGCGCT 57
|||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||
Sbjct 1 GAGATGTGGCGGTGCCTTCGAGTTGCGTCGTCGTCGAGGAGATCGGAATCTAATGGCGCT 60
Query 58 TTCATCACTACTCGACTCTCCAGATTCTTCTCAGCTCCTTCTTCGACAGGGGATAGATCA 117
||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct 61 TTCATCACTTCTCAACTCTCCAGATTCTTCTCAGCTCCTCCTTCGGCAGGGGATAAATCA 120
Query 118 TCGTATACAATCGTAGATCACACGTATGATGCGGTTGTTGTAGGAGCTGGTGGTGCTGGG 177
|||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 121 TCGTATACGATCGTAGATCATACATATGATGCGGTTGTTGTAGGAGCTGGTGGTGCTGGG 180
Query 178 CTAAGAGCAGCAATAGGATTATCAGAACATGGTTTTAACACGGCTTGTATCACTAAGCTT 237
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 181 CTAAGAGCAGCAATAGGATTATCAGAGCATGGTTTTAACACGGCTTGTATCACTAAGCTT 240
Query 238 TTTCCAACTCGTTCCCATACAGTTGCTGCTCAGGGAGGTATAAATGCTGCGTTGGGTAAT 297
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 241 TTTCCAACTCGTTCCCATACTGTTGCAGCTCAGGGAGGTATAAATGCTGCGTTGGGTAAT 300
Query 298 ATGAGTGAAGATGACTGGAGATGGCATATGTATGATACTGTCAAGGGAAGTGATTGGTTA 357
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 301 ATGAGTGTAGATGACTGGAGATGGCATATGTATGATACTGTCAAAGGAAGTGATTGGTTA 360
Query 358 GGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATTGAGCTT 417
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 361 GGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATAGAGCTT 420
Query 418 GAGAATTACGGATTGCCATTTTCTCGAACAGAAGAGGGAAAAATATATCAACGAGCTTTT 477
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 421 GAGAATTACGGATTGCCATTTTCTAGAACAGAAGATGGAAAAATATATCAACGAGCTTTC 480
Query 478 GGTGGCCAGAGTCTTGATTTTGGAAAAGGTGGTCAAGCATACCGTTGCGCATGTGCTGCT 537
|||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 481 GGTGGCCAGAGTCTCGAGTTTGGAATAGGTGGTCAAGCATATCGTTGCGCATGTGCTGCT 540
Query 538 GACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAACACAACACT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAACACAACACT 600
Query 598 CAATTCTTTGTGGAATACTTTGCCTTGGATTTGATAATGAACAGTGATGGAACCTGTCAA 657
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 CAATTCTTTGTTGAATACTTTGCCTTGGATTTGATAATGAACAGTGATGGAACCTGTCAA 660
Query 658 GGAGTCATTGCACTGAACATGGAAGATGGTACTTTACATCGTTTCCATGCTGGTTCTACG 717
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 661 GGAGTCATTGCACTGAACATGGAAGATGGAACTTTACATCGTTTCCATGCGGGTTCCACG 720
Query 718 ATATTGGCTACCGGGGGCTATGGGAGAGCTTATTTTTCTGCAACTTCAGCACATACGTGC 777
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 721 ATATTGGCTACCGGGGGCTATGGAAGAGCTTATTTCTCTGCAACTTCAGCACATACATGC 780
Query 778 ACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTGCAGGATTTGGAGTTT 837
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 781 ACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTTCAAGATTTGGAGTTT 840
Query 838 GTTCAGTTTCATCCTACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGAGCTAGA 897
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 841 GTTCAGTTTCATCCTACTGGTATATATGGAGCTGGATGTCTCATCACTGAAGGAGCTAGA 900
Query 898 GGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGAAATTCATGGACCGGTATGCTCCC 957
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 901 GGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGAAATTCATGGATCGATATGCTCCC 960
Query 958 ACGGCTAGAGATCTTGCTTCAAGAGATGTCGTTTCAAGATCGATGACTATGGAAATCCGA 1017
|||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 961 ACGGCTAGAGATCTGGCTTCAAGAGATGTTGTTTCAAGATCAATGACTATGGAAATCCGA 1020
Query 1018 GAAGGACGTGGTGCAGGACCTATGAAGGATCA-CATATACCTTCACTTAAACCATCTACC 1076
||||||||||||||||||| ||||||||| | | |||||||| ||||||||||||||||
Sbjct 1021 CAAGGACGTGGTGCAGGACCAATGAAGGATTATC-TATACCTTTACTTAAACCATCTACC 1079
Query 1077 ACCAGAAGTGCTTAAAGAGAGGCTTCCTGGTATATCTGAAACTGCGGCTATTTTCGCGGG 1136
|||||||||||||||||||||||| || ||||||||||| || || ||||| ||||| ||
Sbjct 1080 ACCAGAAGTGCTTAAAGAGAGGCTACCCGGTATATCTGAGACCGCAGCTATATTCGCTGG 1139
Query 1137 TGTCGATGTTACAAGAGAGCCAATTCCTGTATTGCCTACTGTGCATTATAATATGGGTGG 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TGTCGATGTTACAAGAGAGCCAATTCCTGTATTGCCTACTGTGCATTATAATATGGGTGG 1199
Query 1197 TATTCCCACAAACTACCATGGAGAGGTAATTACTGTTAGAGGTGATGATCCAAATGCTAT 1256
||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |
Sbjct 1200 TATTCCCACAAACTACCATGGAGAGGTGATTACTCTTAGAGGTGATGATCCAGATGCTGT 1259
Query 1257 AGTTCCGGGACTAATGGCTGCAGGAGAAGCAGCTTGTGCATCTGTTCATGGTGCTAATAG 1316
|||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 1260 AGTTCCTGGACTAATGGCTGCAGGAGAAGCAGCTTGCGCATCGGTTCATGGCGCTAATAG 1319
Query 1317 ACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGAAGAGCTTGTGCAAACAGAGT 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 ACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGAAGAGCTTGTGCAAACAGAGT 1379
Query 1377 TGCAGAGATTCAAAAACCAGGCGAGAAACTGAAACCTCTAGAGAAGGATGCGGGTGAGAA 1436
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1380 TGCAGAGATTCAAAAACCTGGTGAGAAACTGAAACCTCTAGAGAAGGATGCGGGTGAGAA 1439
Query 1437 GAGTATTGAATGGTTGGACCGAATAAGAAACTCAAACGGGTCGCTACCGACTTCTAAAAT 1496
|||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 1440 GAGTATCGAATGGTTGGACCGAATAAGAAACTCAAACGGGTCACTTCCAACTTCTAAAAT 1499
Query 1497 CCGCTTAAACATGCAAAGAGTAATGCAAAACAATGCTGCTGTCTTTC-GTACGCAAGAAA 1555
|||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct 1500 CCGCTTAAACATGCAAAGAGTAATGCAAAACAATGCTGCTGT-TTTCCGTACACAAGAAA 1558
Query 1556 CTCTAGAGGAAGGTTGTGATTTGATTGATAAGACGTGGGACAGTTTTGGTGATGTCAAAG 1615
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 CACTAGAGGAAGGTTGTGATTTGATTGATAAGACGTGGGACAGTTTTGGTGATGTCAAAG 1618
Query 1616 TAACGGATCGGAGTATGATATGGAACTCGGATTTGATAGAAACTATGGAGTTAGAGAATC 1675
| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1619 TGACTGATCGGAGTATGATATGGAACTCGGATTTGATAGAAACTATGGAGCTAGAGAATC 1678
Query 1676 TTTTGGTTAATGCGTGCATAACAATGCATTCTGCTGAGGCTAGGAAGGAAAGTCGAGGAG 1735
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1679 TTTTGGTTAATGCATGCATAACAATGCATTCTGCTGAGGCTAGGAAGGAGAGTCGAGGAG 1738
Query 1736 CACATGCTCGTGAGGATTTCACGAAACGAGACGATGCAAATTGGATGAAGCACACATTGG 1795
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1739 CACATGCTCGTGAGGATTTCACGAAACGGGACGATGCAAATTGGATGAAGCACACATTGG 1798
Query 1796 GGTATTGGGAAGAAGGGAATGTGAAATTGGAGTATAGACCAGTGCATATGAATACATTGG 1855
||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||
Sbjct 1799 GGTATTGGGAAGAAGGGAATGTGAAATTGGAGTATAGACCAGTCCACATGAAGACCTTGG 1858
Query 1856 ATGATGAGGTTGACACTTTTCCTCCTAAACCTCGTGTTTATTGAGATTTCTT 1907
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1859 ATGATGAGGTTGACACTTTTCCTCCTAAACCTCGTGTTTATTGACATTTCTT 1910
> AT5G66760.1 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 |
chr5:26653658-26657536 FORWARD LENGTH=2335
Length=2335
Score = 1496 bits (810), Expect = 0.0
Identities = 1488/1814 (82%), Gaps = 52/1814 (3%)
Strand=Plus/Plus
Query 112 AGATCATCGTATACAATCGTAGATCACACGTATGATGCGGTTGTTGTAGGAGCTGGTGGT 171
||||| || ||||| || || |||||||| |||||||||||||| || ||||||||||||
Sbjct 236 AGATCCTCTTATACGATAGTGGATCACACTTATGATGCGGTTGTGGTGGGAGCTGGTGGT 295
Query 172 GCTGGGCTAAGAGCAGCAATAGGATTATCAGAACATGGTTTTAACACGGCTTGTATCACT 231
||||| || || || || || || ||||| || ||||| |||||||| ||||| || |||
Sbjct 296 GCTGGTCTTAGGGCGGCGATTGGGTTATCGGAGCATGGCTTTAACACCGCTTGCATTACT 355
Query 232 AAGCTTTTTCCAACTCGTTCCCATACAGTTGCTGCTCAGGGAGGTATAAATGCTGCGTTG 291
|||||||| || || | || ||||| |||||||||||||| ||||| |||||||| ||
Sbjct 356 AAGCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTG 415
Query 292 GGTAATATGAGTGAAGATGACTGGAGATGGCATATGTATGATACTGTCAAGGGAAGTGAT 351
|| |||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 416 GGAAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGAC 475
Query 352 TGGTTAGGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATT 411
||| |||||||||||||||| || ||||| ||||| || || ||||||||||| || |||
Sbjct 476 TGGCTAGGTGATCAAGATGCTATCCAGTACATGTGTAGAGAGGCACCAAAAGCAGTCATT 535
Query 412 GAGCTTGAGAATTACGGATTGCCATTT-TCTCGAACAGAAG-AGGGAAAAATATATCAAC 469
|| ||||||||||| || |||| ||| ||||| || |||| |||| ||||| || || |
Sbjct 536 GAACTTGAGAATTATGGGCTGCC-TTTCTCTCGTACTGAAGAAGGG-AAAATTTACCAGC 593
Query 470 GAGCTTTTGGTGGCCAGAGTCTTGATTTTGGAAAAGGTGGTCAAGCATACCGTTGCGCAT 529
| || |||||||| ||||||||||| ||||||||||||||||| || || ||||| || |
Sbjct 594 GTGCATTTGGTGGTCAGAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTT 653
Query 530 GTGCTGCTGACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAAC 589
||||||| || | ||||| ||||||||||| |||||||| ||||| ||||| ||||| |
Sbjct 654 GTGCTGCGGATAGGACTGGTCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGC 713
Query 590 ACAACACTCAATTCTTTGTGGAATACTTTGCCTTGGATTTGATAATGAAC-AGTGATGGA 648
| ||||| || |||||||| |||||||| ||||||||| || | ||| | ||||||||
Sbjct 714 ATAACACACAGTTCTTTGTTGAATACTTCGCCTTGGATCTGCTCATG-GCTAGTGATGGC 772
Query 649 ACCTGTCAAGGAGTCATTGCACTGAACATGGAAGATGGTACTTTACATCGTTTCCATGCT 708
| || || || || |||||||| |||||||||||||| || || |||||||||| | ||
Sbjct 773 AGTTGCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCCGTTCT 832
Query 709 GGT-TC-TACGATATTGGCTACCGGGGGCTATGGGAGAGCTTATTTTTCTGCAACTTCAG 766
| || || || ||||| || ||||| || || ||||| || || |||||||| ||||
Sbjct 833 --TCTCAAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAG 890
Query 767 CACATACGTGCACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTGCAGG 826
||||||| |||||||| ||||||||||| ||||||||||| ||||| || || |||||||
Sbjct 891 CACATACATGCACAGGGGATGGAAATGCAATGGTTGCACGGGCCGGTCTTCCACTGCAGG 950
Query 827 ATTTGGAGTTTGTTCAGTTTCATCCTACTGGTATATATGGAGCCGGATGTCTCATCACTG 886
| |||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| |
Sbjct 951 ACTTGGAGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCCGGATGTCTCATCACCG 1010
Query 887 AAGGAGCTAGAGGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGA-AATTCATGGAC 945
||||| || |||||||||| || || || ||||||||||||||||| | || |||||
Sbjct 1011 AAGGATCTCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGA-ACGTTTTATGGAA 1069
Query 946 CGGTATGCTCCCAC-GGCTAGAGATCTTGCTTCAAGAGATGTCGTTTCAAGATCGATGAC 1004
|| |||||||| || | | || |||||||| ||||||||||| || || ||||| |||||
Sbjct 1070 CGATATGCTCCTACAGCCAAG-GATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGAC 1128
Query 1005 TATGGAAATCCGAGAAGGACGTGGTGCAGGACC-TATGAAGGATCACATATACCTTCACT 1063
|||||||||| | ||||| ||||||| |||||| || |||||||| || || || || |
Sbjct 1129 TATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCAT-AAGGATCATATCTATCTCCA-T 1186
Query 1064 -TAAACCATCTACCACCAGAAGTGCTTAAAGAGAGGCTTCCTGGTATATCTGAAACTGCG 1122
| || ||||| || |||||||| || ||||| ||||||||||| || ||||| || ||
Sbjct 1187 CTGAATCATCTTCCTCCAGAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACCGCT 1246
Query 1123 GCTAT-TTTCGCGGGTGTCGATGTTA-CAAGAGAGCCAATTCCTGTATTGCCTACTGTGC 1180
|| || ||| || ||||| ||||||| ||| ||||||||||||||| || || || || |
Sbjct 1247 GCCATCTTT-GCTGGTGTTGATGTTACCAA-AGAGCCAATTCCTGTCTTACCCACGGTTC 1304
Query 1181 ATTATAATATGGGTGGTATTCCC-ACAAACTACCATGGAGAGGTAATTACTGTTAGAGGT 1239
||||||| |||||||||| |||| |||||||||||||| |||||| |||| | | |||
Sbjct 1305 ATTATAACATGGGTGGTA-TCCCAACAAACTACCATGGCGAGGTAGTTACCATCAAAGGC 1363
Query 1240 GATGATCCAAATGCTA-TAG-TTCC-GGGACTAATGGCTGCAGGAGAAGCAGCTTGTGCA 1296
||||||||| |||| | | | |||| ||| ||||||||||| || || ||||||||||||
Sbjct 1364 GATGATCCAGATGC-AGT-GATTCCTGGG-CTAATGGCTGCTGGGGAGGCAGCTTGTGCA 1420
Query 1297 TCTGTTCATGGTGCTAATAGACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGA 1356
|||||||||||||| || || ||||||||||||||||| || |||||||| || |||||
Sbjct 1421 TCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTATTTGGT 1480
Query 1357 AGAGCTTGTGCAAACAGAGTTGCAGAGATTCAA--AAACCAGGCGAGAAACTGAAACCTC 1414
| ||||||||||| || |||||||||| | || |||||||| ||||||| ||||||||
Sbjct 1481 CGTGCTTGTGCAAATAGGGTTGCAGAGA-T-AAGCAAACCAGGGGAGAAACAGAAACCTC 1538
Query 1415 TAGAGAAGGATGCGGGTGAGAAGAGTATTGAATGGTTGGACCGAATAAGAAACTCAAACG 1474
| |||||||||||||||||||||| ||||| |||| ||||| | | |||||||||||||
Sbjct 1539 TTGAGAAGGATGCGGGTGAGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAACG 1598
Query 1475 GGTCGCTACCGACTTCTAA-AATCCGCTTAAACATGCA-AAGAGTAATGCAAAACAATGC 1532
|||| ||||| ||||| || ||| | || |||||||| | || | ||||| ||||| ||
Sbjct 1599 GGTCTCTACCTACTTC-AACTATCAGATTGAACATGCAGAGGA-TTATGCAGAACAACGC 1656
Query 1533 TGCTGTCTTTCGTACGCAAGAAAC-TCTAGAGGAAGGTTGTGATTTGATTGATAAGACGT 1591
||||| || || ||||||||||| | | || ||||||||| | |||||||| ||| | |
Sbjct 1657 AGCTGTGTTCCGCACGCAAGAAACAT-TGGAAGAAGGTTGTCAGTTGATTGACAAGGCCT 1715
Query 1592 GGGACAGTTTTGGTGATGTCAAAGT-AACGGATCGGAGTATGATATGGAACTCGGATTTG 1650
|||| |||||||| || ||| | || || ||||||||||||||||||||||||||||||
Sbjct 1716 GGGAAAGTTTTGGGGACGTCCAGGTGAA-AGATCGGAGTATGATATGGAACTCGGATTTG 1774
Query 1651 ATAGAAACTAT-GGAGTTAGAGAATCTTTTGGTTAATGCGTGCATAACAATGCATTCTGC 1709
||||| || || ||| | ||||| |||||| | || || | ||||||||||||||| ||
Sbjct 1775 ATAGAGAC-ATTGGAACTGGAGAACCTTTTGATAAACGCATCCATAACAATGCATTCAGC 1833
Query 1710 TGAGGCTAGGAA-GGAAAGTC-GAGGAGCACATGCTCGTGAGGATTTCACGAAACGAGAC 1767
|| || | ||| |||||| | |||||||||||||||| || || ||||||||| ||||
Sbjct 1834 AGAAGC-ACGAAAGGAAAG-CAGAGGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAG 1891
Query 1768 GATGCA-AATTGGATGAAGCACACATTGGGGTATTGGGAAGAAGGGAATGTGAAATTGGA 1826
|||| | ||| |||||||||| |||||||| ||||||||||| | ||| |||| ||||||
Sbjct 1892 GATGGAGAAT-GGATGAAGCATACATTGGGATATTGGGAAGATGAGAAAGTGAGATTGGA 1950
Query 1827 GTATAGACCAGTGCATATGAATACAT-TGGATGATGAGGTTGACACTTTTCCTCCTAAAC 1885
||||| || || || ||| | || | | || |||||| | |||||||| ||||| |||
Sbjct 1951 TTATAGGCCTGTTCACATGGACAC-TCTCGACGATGAGATCGACACTTTCCCTCCCAAAG 2009
Query 1886 CTCGTGTTTATTGA 1899
||||||| ||||||
Sbjct 2010 CTCGTGTCTATTGA 2023
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94427225145
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5