BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480784
Length=2312
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16090.1 | Symbols: ARI2, ATARI2 | RING/U-box superfamily pr... 3022 0.0
AT4G34370.1 | Symbols: ATARI1, ARI1 | RING/U-box superfamily pr... 1369 0.0
> AT2G16090.1 | Symbols: ARI2, ATARI2 | RING/U-box superfamily
protein | chr2:6986834-6990051 REVERSE LENGTH=2544
Length=2544
Score = 3022 bits (1636), Expect = 0.0
Identities = 2149/2379 (90%), Gaps = 106/2379 (4%)
Strand=Plus/Plus
Query 1 CTCTCTCTCTGCTCCTCCGGTTGATTCAGTCC-TTTAACACTTCTC-TTTGATCTCGCCG 58
|||| ||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||
Sbjct 7 CTCTTTCTCTTCTCCTCCGGTTGATTCAGTCCTTTTAACACTCCTCTTTTGATCTCGCCG 66
Query 59 GCAAAATATAAAT-CAACATCCTTCATATCTCTAGTTCTCCGTCATCGTTCTCTTCCTTC 117
|| |||||| || | ||||||||||| |||| | ||||||||||||||||||||||||
Sbjct 67 GC-AAATAT-CATCCCACATCCTTCATGTCTCAAAATCTCCGTCATCGTTCTCTTCCTTC 124
Query 118 GTTGTTACTCTCGTACTTAATCACCTCCGTCGTTC--T-ATA---------G-------- 157
||| |||||||||||||| |||||||||||||||| | ||| |
Sbjct 125 GTTATTACTCTCGTACTTTATCACCTCCGTCGTTCTATAATACTCTCTTCCGTCAATCAT 184
Query 158 ATCATTTGTCTG-CAATTTCAATCTGAAT-AATTTAAAAACTGATCAATGGATGATAATT 215
|||||||||| | |||||||| |||| || | |||||||| ||||| |||||||||||||
Sbjct 185 ATCATTTGTC-GACAATTTCATTCTG-ATCAGTTTAAAAATTGATCCATGGATGATAATT 242
Query 216 TAAGCGGCGAGGAAGACGGTTACTATTACTCCTCCGATCAGGAATCTCTCAACGGCCTTG 275
|||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||
Sbjct 243 TAAGCGGCGAGGAAGAAGATTACTATTACTCCTCCGATCAGGAATCTCTCAACGGGATTG 302
Query 276 ATAATGATCAATCTC-TTTTGCA-ACCTCTTTCTTCCAGAACAAATACTGTCAAGGTTAT 333
|||||||| |||| | ||| | | |||| |||||||| || |||||||||||||||||||
Sbjct 303 ATAATGATGAATC-CGTTTCG-ATACCTGTTTCTTCCCGATCAAATACTGTCAAGGTTAT 360
Query 334 TACGAAGGAATCACTTTTGGCAGCACAGAGGGAGGATTTGCGGAGAGTGATGGAATTGTT 393
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 361 TACGAAGGAATCACTTTTGGCTGCACAGAGGGAGGATTTGCGGAGAGTGATGGAATTGTT 420
Query 394 ATCGGTTAAGGAGCACCATGCTCGGACTCTTCTTATATATTATCGATGGGATGTTGAGAA 453
||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||
Sbjct 421 ATCGGTTAAGGAGCACCATGCTCGGACTCTTCTTATACATTACCGATGGGATGTGGAGAA 480
Query 454 GTTGTTTGCTGTGCTTGTTGAGAAAGGGAAGGATAGTTTGTTTTCTGGTGCTGGTCTTA- 512
|||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||
Sbjct 481 GTTGTTTGCTGTTCTTGTTGAGAAAGGGAAAGATAGCTTGTTTTCTGGTGCTGGTGTTAC 540
Query 513 AGGTTCTTGAAAATCAACCTTGTGATGCTTCTGTTTC--G--CGTTCTTCGATTG-TGAG 567
| |||||||||| ||| ||||||| |||| ||||| | | |||||||| || ||||
Sbjct 541 A-CTTCTTGAAAACCAAAGTTGTGATTCTTCCGTTTCTGGTTC-TTCTTCGA-TGATGAG 597
Query 568 TTGTGATATCTGTATAGAGGATGTACCGGGTTATCAGATGACAAGGATGGATTGTGGCCA 627
|||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 598 TTGTGATATCTGCGTAGAGGATGTACCGGGTTATCAGCTGACAAGGATGGACTGTGGCCA 657
Query 628 TAGCTTTTGCAAT-ACTTGTTGGGCTGGGCATTTTACTGTAAAGATAAATGAAGGTCAGA 686
||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 658 TAGCTTTTGCAATAAC-TGTTGGACTGGGCATTTTACTGTAAAGATAAATGAAGGTCAGA 716
Query 687 GCAAAAGGATTATATGTATGGCTCATAAATGTAATGCTATTTGCGATGAAGATGTAGTCA 746
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 717 GCAAAAGGATTATATGCATGGCTCATAAGTGTAATGCTATTTGTGATGAAGATGTTGTCA 776
Query 747 GGACTTTAGTTAGTAAAAGCCAACCAGATTTAGCTGAGAAGTTTGATCGTTTTCTTCTTG 806
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GGGCTCTAGTTAGTAAAAGCCAACCAGATTTAGCTGAGAAGTTTGATCGTTTTCTTCTTG 836
Query 807 AGTCGTATATCGAAGATAACAAAATGGTGAAGTGGTGTCCGAGCACTCCGCATTGTGGGA 866
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 837 AGTCGTATATCGAAGATAACAAAATGGTGAAGTGGTGTCCGAGTACTCCTCATTGTGGGA 896
Query 867 ATGCAATACGTGTTGAGGATGATGAGCTTTGTGAGGTTGAATGCTCATGTGGTTTGCAGT 926
|||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct 897 ATGCCATACGTGTTGAGGATGACGAGCTCTGTGAGGTTGAATGCTCTTGTGGTTTGCAGT 956
Query 927 TCTGTTTCAGTTGTTCATCTCAAGCCCACTCCCCTTGCTCTTGTGTCATGTGGGAGCTGT 986
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |
Sbjct 957 TCTGTTTCAGTTGTTCATCTCAAGCTCACTCCCCTTGCTCTTGTGTGATGTGGGAACTAT 1016
Query 987 GGAGAAAGAAGTGCTATGATGAGTCCGAGACAGTTAACTGGATAACTGTTCACACAAAGC 1046
||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1017 GGAGAAAGAAGTGCTTTGATGAGTCCGAGACTGTTAATTGGATAACTGTTCACACAAAGC 1076
Query 1047 CGTGTCCCAAATGTAACAAGCCCGTTGAAAAGAATGGTGGATGCAATCTCGTGACTTGTC 1106
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1077 CGTGTCCCAAATGTCACAAGCCTGTTGAAAAGAATGGTGGATGCAATCTCGTGACTTGTC 1136
Query 1107 TTTGTCGACAATCTTTTTGTTGGTTGTGTGGTGGAGCTACTGGAAGGGACCACACTTGGT 1166
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1137 TTTGTCGACAATCTTTTTGTTGGTTGTGTGGTGAAGCTACTGGAAGGGACCACACTTGGG 1196
Query 1167 CTAGAATCTCAGGTCATAGTTGTGGTCGGTTCCAAGAAGATAAAGAGAAACAAATGGAGA 1226
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 CTAGAATCTCGGGTCATAGTTGTGGTCGGTTCCAAGAAGATAAAGAGAAACAAATGGAGA 1256
Query 1227 GAGCAAAAAGGGATCTCGAA-CGGTATATGCATTATCATAACCGGTACAAAGCACATA-C 1284
|||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||| |
Sbjct 1257 GAGCGAAAAGGGATCTC-AAGCGGTATATGCATTATCATAACCGATACAAAGCACATATC 1315
Query 1285 TGACTCCTCCAAGCTAGAGGCTGAGCTTAGTTATAGTATTCGTAAAAAAGTGTCGT-TTT 1343
||||||||||||||||||||| |||||||| ||| |||| ||||||| ||||| | |||
Sbjct 1316 -GACTCCTCCAAGCTAGAGGCTAAGCTTAGTAATAATATTAGTAAAAAGGTGTC-TATTT 1373
Query 1344 CAGAAAAGAGGGAGTTACAACTTAAAGACTTCAGCTGGGCTACCAATGGACTCCATCGGT 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CAGAAAAGAGGGAGTTACAACTTAAAGACTTCAGCTGGGCTACCAATGGACTCCATCGGT 1433
Query 1404 TAGTTAGATCAAGACGAGTTATTTCATATTCATACCCTTTCGCATTTTACATGTTTGGAG 1463
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1434 TATTTAGATCAAGACGAGTTCTTTCATATTCATACCCTTTCGCATTTTACATGTTTGGAG 1493
Query 1464 ATGAACTGTTTAAAGATGAGATGAGCTCTGAAGAGAGAGAAATAAAACAAAATCTGTTTG 1523
|||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1494 ATGAGCTGTTTAAAGATGAGATGAGCTCTGAGGAAAGAGAAATAAAACAAAATCTGTTTG 1553
Query 1524 AGGATCAGCAGCAGCAGCTTGAGGCTAATGTTGAGAAACTTTCTAAGTTCTTGGAGGAAC 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 AGGATCAGCAGCAGCAGCTTGAGGCTAATGTTGAGAAACTTTCTAAGTTCTTGGAGGAAC 1613
Query 1584 CCTTTGATCAATTTGCTGATGATAAGGTCATGCAGATAAGGATTCAAGTCATCAATTTGT 1643
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 CTTTTGATCAATTTGCTGATGATAAGGTCATGCAGATAAGGATTCAAGTCATCAATTTGT 1673
Query 1644 CAGTTGCGGTTGATACCCTCTGCaaaaaaaTGTATGAATGCATTGAGAATGAATTGTTGG 1703
|||||||||| ||||| |||||| |||| ||||||||||||||||||||||| |||||||
Sbjct 1674 CAGTTGCGGTCGATACACTCTGCGAAAATATGTATGAATGCATTGAGAATGACTTGTTGG 1733
Query 1704 GTTCTCTGCAACTTGGCATCCACAACATTACTCCATATAGATCAAACGGCATAGAACGAG 1763
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1734 GTTCTCTGCAACTTGGCATCCACAACATTACTCCATACAGATCAAACGGCATAGAACGAG 1793
Query 1764 CATCTGACTTTTATAGTTCTCAGAATTCAAAGGAAGCTGTTGGTGAAATATGTCAGTCTT 1823
||||||| ||||||||||| |||||||| ||||||||||||||| |||||||
Sbjct 1794 CATCTGATTTTTATAGTTCCCAGAATTCCAAGGAAGCTGTTGGT---------CAGTCTT 1844
Query 1824 CGGATTGTGGTACAAGCGGATGGACGTCCAGGCTCGATCAAGCTTTGG-GATCTGGAAAT 1882
|||||||||| | |||||||||||||||||||||||||||| | || || ||
Sbjct 1845 CGGATTGTGG-A--------TGGACGTCCAGGCTCGATCAAGCTTTGGAG-TCAGGGAAG 1894
Query 1883 TCGGAAGACACAAGTTGCTCTTCCAATAAGCGTGCCAGAATAGACGGAAGTTACAGAAAC 1942
|||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||
Sbjct 1895 TCGGAAGACACAAGTTGCTCTTCCGGGAAGCGTGCTAGAATAGACGAAAGTTACAGAAAC 1954
Query 1943 AGCCAAACCACCTTACTAGATTTAAACTTGCCAGCAGAAGCCATTGAGCGGAAATGAACA 2002
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1955 AGCCAAACCACCTTACTAGATTTAAACTTGCCAGCGGAAGCCATTGAGCGGAAATGAACA 2014
Query 2003 CTTATCCTACTTCTCCAACCAATAACACCCTTTTTGTCCAAATAAAGCGTGTTACCCGGA 2062
|||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2015 CTTATCCTTCTTCACCTCCCAATAACACCCTTTTTGTCCAAATAAAGTGTGTTACCCGGA 2074
Query 2063 AATGTATAGCTCTTAACCCTATCACCTCTGCTTGATTTGTTTTTCACTGACCTTACCTAA 2122
|| ||||||||| ||||| ||| ||||||||| |||||| || |||||||||||||
Sbjct 2075 TATTTATAGCTCTAAACCCAATCCCCTCTGCTTAATTTGT----CAGTGACCTTACCTAA 2130
Query 2123 CAATCTTCACTTCTGAAACA-----TC--G--T--TT-CTTACAAAATTTTAATCAGTTT 2170
| |||||| |||||||| | || | | || |||||||||||| |||||||||
Sbjct 2131 CCCTCTTCAGTTCTGAAAGAAGGGGTCAAGCATCGTTACTTACAAAATTTCAATCAGTTT 2190
Query 2171 CGGAGTTTA--T-GGA-------------CTTATAGTGGATTACATCTTTGAAGCTGTCT 2214
||||||||| | ||| |||||||||||| ||| |||||||||| ||
Sbjct 2191 CGGAGTTTACATAGGATAATGGTTATAGACTTATAGTGGAT--CATATTTGAAGCTGCCT 2248
Query 2215 ATGAACTCAGGCTTCTCTCAGTGGCTCAAGGTGTAAATTGTTAACTCAACGTAGGTGGAT 2274
||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||
Sbjct 2249 ATGAACTCAGGCTTCTCTCAGTGCCTCGAGGTGTAAATTTTTAACTAAACGTAGGTGGAT 2308
Query 2275 CGTTAC-TAATTCAAGGATATGAATTTCTTATACATATG 2312
||| || ||||||| |||||||||| |||| ||||||||
Sbjct 2309 CGT-ACCTAATTCATGGATATGAATCTCTTGTACATATG 2346
> AT4G34370.1 | Symbols: ATARI1, ARI1 | RING/U-box superfamily
protein | chr4:16434333-16437309 FORWARD LENGTH=2280
Length=2280
Score = 1369 bits (741), Expect = 0.0
Identities = 1475/1821 (81%), Gaps = 83/1821 (5%)
Strand=Plus/Plus
Query 197 TGATCAATGGATGATAATTTAAGCGGC-GAGGAAGACGG-TTACTATTACTCCTCCGATC 254
||||| ||||||||| |||| ||| || |||||||| || || |||||||||||||||||
Sbjct 209 TGATCGATGGATGATTATTTTAGC-GCGGAGGAAGA-GGCTTGCTATTACTCCTCCGATC 266
Query 255 AGGAATCTCTCAACGGCCTTGATAATGATCAATCTCTTTTGCAACCTCT-T--TCTTCCA 311
| || ||| | | || |||||||||| | ||| ||||| ||||| | ||| |
Sbjct 267 AAGATTCTTTGGATGGAATTGATAATGAAGAGTCTGAATTGCAGCCTCTGTCCTCTAAAA 326
Query 312 GAACAAATACTGTCAAGGTTATTACGAAGGAATCACTTTTGGCAGCACAGAGGGAGGATT 371
|| |||| || || |||| || || ||||||| ||| | ||||||||||| || ||||
Sbjct 327 GATCAAACAC--TC-AGGTCATCACTCAGGAATCGCTTCTAGCAGCACAGAGAGAAGATT 383
Query 372 TGCGGAGAGTGATGGAATTGTTATCGGTTAAGGAGCACCATGCTCGGACTCTTCTTATAT 431
||| || ||||||||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct 384 TGCTAAGGGTGATGGAATTGTTATCAATAAAGGAGCACCATGCACGGACTCTTCTTAT-T 442
Query 432 -ATTATCGA-TGGGATGTTGAGAAGTTGTTTGCTGTGCTTGTTGAGAAAGGGAAGGATAG 489
|||| | | |||||||| |||||||||||||||||| ||||||||||||| || |||||
Sbjct 443 CATTA-CCAGTGGGATGTGGAGAAGTTGTTTGCTGTGTTTGTTGAGAAAGGAAAAGATAG 501
Query 490 TTTGTTTTCTGGTGCTGGTCTTAAGGTTCTT-GAAAATCAACCTTGTGA-TGCTT-CTGT 546
||||||||||| |||||| | | | |||| || ||||| | | | | ||| || |
Sbjct 502 CTTGTTTTCTGGAGCTGGTGTCACTG-TCTTCGATTATCAATATGGCAACT-CTTCCT-T 558
Query 547 TTCGC-GTTCTTCGATTG-TGAGTTGTGATATCTGTATAGAGGATGTACCGGGTTATCAG 604
| | | | ||||| | | ||||||||||| | || || |||||| |||| ||| ||||
Sbjct 559 TCCTCAG-TCTTC-ACAGATGAGTTGTGATGTTTGCATGGAGGATTTACCAGGTGATCAC 616
Query 605 ATGACAAGGATGGATTGTGGCCATAGCTTTTGCAATACTTGTTGGGCTGG-GCATTTTAC 663
|||||||| ||||| ||||||||| |||||||||||| ||||||| | || |||||||||
Sbjct 617 ATGACAAGAATGGACTGTGGCCATTGCTTTTGCAATAATTGTTGGAC-GGAGCATTTTAC 675
Query 664 TGTAAAGATAAATGAAGGTCAGAGCAAAAGGATTATATGTATGGCTCATAAATGTAATGC 723
||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct 676 TGTGCAGATAAATGAAGGTCAGAGCAAAAGGATTAGATGCATGGCTCATCAATGTAATGC 735
Query 724 TATTTGCGATGAAGATGTAGTCAGGACTTTAGTTAGTAAAA-GCCAACCAGATTTAGCTG 782
|||||| ||||||||| | ||||||| | |||| ||||||| || |||||| ||||||
Sbjct 736 TATTTGTGATGAAGATATTGTCAGGAGTCTAGTCAGTAAAAAGCGT-CCAGATCTAGCTG 794
Query 783 AGAAGTTTGATCGTTTTCTTCTTGAGTCGTATATCGAAGATAACAAAATGGTGAAGTGGT 842
|||||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||
Sbjct 795 CGAAGTTTGATCGTTACCTTCTTGAGTCGTACATCGAAGATAACAGAATGGTCAAGTGGT 854
Query 843 GTCCGAGCACTCCGCATTGTGGGAATGCAATACGTGTTGAGGATGATGAGCTT-TGTGAG 901
|||| ||||||||||||||||||||||| ||||| | ||||||||| || || || ||
Sbjct 855 GTCCTAGCACTCCGCATTGTGGGAATGCTATACGAGCTGAGGATGACAAG-TTGTGCGAA 913
Query 902 GTTGAATGCTCATGTGGT-TTGCAGTTCTGTTTCAGTTGT-TCATCTCAAGCCCACTCCC 959
|||||||| || |||||| || |||||||||||||||||| | | ||||||||||||||
Sbjct 914 GTTGAATGTTCTTGTGGTCTT-CAGTTCTGTTTCAGTTGTCTG-TGTCAAGCCCACTCCC 971
Query 960 CTTGCTCTTGTGTCATGTGGGAGCTGTGGAGAAAGAAGTG-CTATGATGAGTCCGAGACA 1018
||||||||||| | ||||||||| | |||||||||||||| | | |||||||| ||||||
Sbjct 972 CTTGCTCTTGTTTGATGTGGGAGTTATGGAGAAAGAAGTGTCGA-GATGAGTCTGAGACA 1030
Query 1019 GTTAACTGGATAACTGTTCACACAAAGCCGTGTCCCAAATGTAACAAGCCCGTTGAAAAG 1078
| ||||||||||| ||||||||||||| ||||||||||||| |||| || || ||||||
Sbjct 1031 ATCAACTGGATAACCGTTCACACAAAGCTGTGTCCCAAATGTTACAAACCTGTGGAAAAG 1090
Query 1079 AATGGTGGATGCAATCTCGTGACTTGTCTTTGTCGACAATCTTTTTGTTGGTTGTGTGGT 1138
|||||||||||||||||||||| ||| ||||| | || | |||||||||| | ||||||
Sbjct 1091 AATGGTGGATGCAATCTCGTGAGGTGTATTTGTGGGCAGTGTTTTTGTTGGCTATGTGGT 1150
Query 1139 GGAGCTACTGGAAGGGACCACACTTGGTCT-AGAATCTCAGGTCATAGTTGTGGTCGGTT 1197
|||||||||||||| || ||||||| | || ||| | ||||| |||||||||||||
Sbjct 1151 GGAGCTACTGGAAGTGATCACACTTA-TAGGAGTATCGCTGGTCACAGTTGTGGTCGGTA 1209
Query 1198 CCAAGAAGATAAAGAGAAACAAATGGAGAGAGCAAAAAGGGATCTCGAAC-GGTATATGC 1256
|||||| || |||||||| || ||||| ||||| || || ||| | ||| |||||| ||
Sbjct 1210 CCAAGATGACAAAGAGAAGCAGATGGAAAGAGCGAAGAGAGATTTA-AACAGGTATACGC 1268
Query 1257 ATTATCATAACCGGTACAAAGCACATACTGACTCCTCCAAGCTAGAGGCTGAGCTTAGTT 1316
|||||||| |||| |||||||| ||||| || || || |||||||| | | | |||||
Sbjct 1269 ATTATCATCACCGATACAAAGCTCATACAGATTCATCAAAGCTAGAAGATAAACTTAGGG 1328
Query 1317 ATAGTATTCGTAAAAAAGTGTCGTTTTCAGAAAAGAGGGAGTTACAA-CTTAAAGACTTC 1375
||| ||| | | | ||||||||| ||||||||||||||||| || ||||||||||||
Sbjct 1329 ATACTATCCATGAGAAAGTGTCGAAATCAGAAAAGAGGGAGTTG-AAGCTTAAAGACTTC 1387
Query 1376 AGCTGGG-CTACCAATGGACTCCATCGGTTAGTT-AGATCAAGACGAGTTATTTCATATT 1433
||||||| | |||||||||||| | |||||| || |||||||| |||||| |||||||||
Sbjct 1388 AGCTGGGTC-ACCAATGGACTCGACCGGTTA-TTCAGATCAAGGCGAGTTCTTTCATATT 1445
Query 1434 CATACCCTTTCGCATTTTACATGTTTGGAGATGA-ACTGTTTAAAGATGAGATGAGCTCT 1492
| || |||| |||| ||| |||||||| || || | |||||||||||||||||| | ||
Sbjct 1446 CGTATGCTTTTGCATATTATATGTTTGGTGAAGAGA-TGTTTAAAGATGAGATGACCCCT 1504
Query 1493 GAAGAGAGAGAAATAAAACAA-AATCTGTTTGAGGATCAGCAGCAGCAGCTTGAG-GCTA 1550
|| |||||||| ||||| || ||| ||||||||||||||||||| || ||||| | ||
Sbjct 1505 GAGGAGAGAGAGATAAAG-AAGAATTTGTTTGAGGATCAGCAGCAACAACTTGAAAG-TA 1562
Query 1551 ATGTTGAGAAACTTTCTAAGTTC-TTGGAGGAACCCTTTGATCAATTT-GCTGATGATAA 1608
|||| ||||||||||| ||||| ||| |||| ||||||||| ||||| | | |||||||
Sbjct 1563 ATGTGGAGAAACTTTCGCAGTTCCTTG-AGGAGCCCTTTGATGAATTTAG-TAATGATAA 1620
Query 1609 GGTCATG-CAGATAAGGATTCAAGTCATCAATTTGTCAGTTGCGGTTGATACCCTCTGCa 1667
|| ||| | ||||||||||||| ||||||||||||| || || || ||||| |||||||
Sbjct 1621 AGTTATGGC-GATAAGGATTCAAATCATCAATTTGTCTGTCGCCGTCGATACACTCTGCA 1679
Query 1668 aaaaaaTGTATGAATGCATTGAGAATGAATTGTTGGGTTCTCTGCAACTTGGCATCCACA 1727
| |||||||| || |||||||||||||| || | || ||||| ||||||||||||||||
Sbjct 1680 AGAAAATGTACGAGTGCATTGAGAATGACTTACTCGGATCTCTCCAACTTGGCATCCACA 1739
Query 1728 ACAT-TACTCCATATAGATCAAACGGCATAGAACGAGCATCTGACTTTTATAG-TTCTCA 1785
|||| | | || || ||||| || || || |||| |||| || | |||||| | ||| |
Sbjct 1740 ACATCT-CACCTTACAGATCGAAGGGAATCGAACAAGCAGCTCAGTTTTAT-GCTTC-CT 1796
Query 1786 G-AATTC-AAAGGAAGCTGTTGGTGAAATATGTCAGTCTTCGGATTGTGGTACAAGCGGA 1843
| ||||| |||| | |||| |||| | || ||| |||| ||||||||||||||
Sbjct 1797 GGAATTCCAAAG-ATGCTGAC----AAAT-TC-CAACCTTTGGATAGTGGTACAAGCGGA 1849
Query 1844 -TGGACGTCCAGGC-TCGATCAAGCTTTGGGATCT-GGAAATTCGGAAGACACAAGTTGC 1900
|| || || |||| | || ||||||| ||||| ||| | |||||||||| | ||||
Sbjct 1850 GTG-ACATCGAGGCCT-GAGCAAGCTTCAGGATCAAGGAGCT-CGGAAGACACCATTTGC 1906
Query 1901 TCTTC--CA-ATAAGCGTGCCAGAATAGACGGAAGTTACAGAAACAGCCAAAC-CACCTT 1956
|| || || | || ||| ||| || ||| ||||||| | ||||| | ||| ||| ||
Sbjct 1907 TCATCTTCACAGAAACGTCCCAAAAAAGAAGGAAGTTTCTTAAACAAC-AAAGTCACTTT 1965
Query 1957 ACTAGATTTAAACTTGCCAGC 1977
| | ||||| |||||||||||
Sbjct 1966 ATTGGATTTGAACTTGCCAGC 1986
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114758445870
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5