BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480794
Length=1359
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16230.1 | Symbols: | O-Glycosyl hydrolases family 17 prote... 2017 0.0
AT4G34480.1 | Symbols: | O-Glycosyl hydrolases family 17 prote... 776 0.0
AT5G42720.1 | Symbols: | Glycosyl hydrolase family 17 protein ... 198 1e-49
> AT2G16230.1 | Symbols: | O-Glycosyl hydrolases family 17 protein
| chr2:7035463-7038326 REVERSE LENGTH=1512
Length=1512
Score = 2017 bits (1092), Expect = 0.0
Identities = 1251/1330 (94%), Gaps = 2/1330 (0%)
Strand=Plus/Plus
Query 1 ATGGctctctccatcttcttccctctcctcttcgttctcttctctGTTTCGCCGTCAAAT 60
||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct 1 ATGGCTCTCTCCATCCTCTTCCTTCTCCTCTTCATTCTCTTCTCTATTTCGCCGTCAAAT 60
Query 61 GCACAGTCGTTTATCGGAGTAAACTACGGCTTACTAGCCGACAACCTCCCACCACCGTC- 119
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||
Sbjct 61 GCACAGTCGTTTATCGGAGTAAACTACGGCTTACTATCCGACAACCTCCCGCCACCTTCT 120
Query 120 CGAAACGGCCAAACTCCTTCAATCTACCTCCATCGAGAAAGTGAGGCTATACAATGCCGA 179
| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||
Sbjct 121 C-AAACGGCCAAACTCCTCCAATCTACCTCCATCCAGAAAGTGAGGCTATACAATGCGGA 179
Query 180 TCCCTCCATCATCAAATCCTTGGCAGGCACCGACATCGGCATTGTTATCGGAGTAGCCAA 239
| |||||||||||| |||||||| || |||| || || ||||||||||||||||| ||
Sbjct 180 TTCCTCCATCATCACATCCTTGGTTGGAACCGGTATTGGTATTGTTATCGGAGTAGCAAA 239
Query 240 TGGCGATCTCCCGTCTATGGCCTCTGATTTCAATGTCGCTTCTCAGTGGATAAATTCCAA 299
|||||||||||||||||| ||||| ||| |||| | || ||||||||||||||||||||
Sbjct 240 TGGCGATCTCCCGTCTATCGCCTCGGATCTCAACATTGCCTCTCAGTGGATAAATTCCAA 299
Query 300 CGTACTTCCTTTCTATCCTGCCTCCAACATCATTCTCATCAATGTCGGCAACGAGGTGTT 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CGTACTTCCTTTCTATCCTGCCTCCAACATCATTCTCATCAATGTCGGCAACGAGGTGTT 359
Query 360 GTTGTCTAATGACCTGAATCTAGTGAACCAACTTCTCCCGGCGATGCAAAATGTTCAAAA 419
|||||| ||||| |||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 360 GTTGTCAAATGATCTGAATCTTGTAAACCAACTTCTCCCGGCTATGCAAAATGTTCAAAA 419
Query 420 GGCCCTCGAGGCGGTTTCACTAGGCAGAAAAATCAAGGTGTCTACGGTCCATGCAATGAC 479
||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 420 GGCTCTCGAGGCGGTTTCACTAGGTGGAAAAATCAAGGTGTCTACTGTCCATGCAATGAC 479
Query 480 GGTGCTAGGCAACTCCGAACCGCCATCAGCTGGTTCATTTGCTCCTAGTTATCAGGCTGG 539
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 480 AGTACTAGGCAACTCCGAACCGCCATCAGCTGGTTCGTTTGCTCCTAGTTATCAGGCCGG 539
Query 540 TTTAAAGGGCATTCTACAGTTCCTTAGCGATACTGAGTCGCCTTTTGCCATCAACCCGTA 599
||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct 540 TTTAAAGGGCATTCTACAGTTTCTTAGCGATACCGGGTCGCCTTTTGCCATCAACCCGTA 599
Query 600 CCCGTTCTTTGCGTACCAGAGCGACCCGAGACCCGAAACGCTGGCGTTTTGTCTTTTCCA 659
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CCCGTTCTTTGCATATCAGAGCGACCCGAGACCCGAAACGCTGGCGTTTTGTCTTTTCCA 659
Query 660 GCCTAACCCTGGACGGGTAGACTCCAACACTGGAATCAAGTACATGAACATGTTCGATGC 719
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 660 GCCTAACCCTGGACGGGTAGACTCAAACACTGGAATCAAGTACATGAACATGTTTGATGC 719
Query 720 TCAGGTTGATGCAGTACACTCAGCTTTGAAATCGATGGGATTCGAGAAAGTAGAAGTGTT 779
||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 720 TCAGGTTGATGCAGTGCACTCAGCTTTGAAATCGATAGGATTCGAGAAAGTGGAAGTGTT 779
Query 780 GGTAGCCGAAACAGGTTGGCCATCTACCGGTGACAACAACGAGGTAGGTCCAAGTGTTGA 839
||| |||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||
Sbjct 780 GGTGGCCGAAACTGGTTGGCCATCAACCGGTGACAGCAACGAGGTAGGTCCGAGTGTTGA 839
Query 840 GAATGCTAAGGCTTACAATGGAAATCTCATTGCTCACTTAAGGTCCATGGTTGGCACTCC 899
||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 840 GAATGCTAAAGCTTACAACGGAAATCTCATTGCTCACTTAAGGTCCATGGTTGGGACTCC 899
Query 900 GCTCATGCCCGGCAAATCCATCGACACTTACATTTTCGCTCTCTTTGACGAGAATCTCAA 959
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GCTCATGCCCGGAAAATCCATCGACACTTACATTTTCGCTCTCTTTGACGAGAATCTCAA 959
Query 960 GCCTGGTCCTTCCTTTGAGCGATCTTTTGGCCTTTTCAAGCCTGATCTTTCCATGGCCTA 1019
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 960 GCCTGGTCCTTCTTTTGAGCAATCTTTTGGCCTTTTCAAGCCTGATCTTTCCATGGCCTA 1019
Query 1020 CGACATTGGACTCACTAAAACTACTAGTAGTCAGACTTCACAATCTCCACAGTTGGGAAA 1079
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1020 CGACATTGGACTCACTAAAACTACTAGTAGCCAGACGTCACAATCTCCACAGTTGGGAAA 1079
Query 1080 AGCAACATCCATGGGATGGTGTGTGCCAAAGGAGGATGCGACTCAAGAGCAGTTGCAAGA 1139
|| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1080 AGTAACATCAATGGGATGGTGTGTGCCAAAGGAGGATGCAACTCAAGAGCAGTTGCAAGA 1139
Query 1140 TAGTCTAGATTGGGTTTGTGGGCAGGGAATCGATTGTGGCCCAATAATGCCAGGAGGGGT 1199
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1140 TAGTCTAGATTGGGTTTGTGGGCAGGGAATTGATTGTGGCCCAATAATGCCAGGAGGAGT 1199
Query 1200 TTGTTTCGAGCCTAACAATCTTGTCTCTCATACAGCATATGCTATGGATCTTTATTTCCA 1259
||||||||||||||||||| | | |||||||||||| ||||| ||| |||||||||||||
Sbjct 1200 TTGTTTCGAGCCTAACAATGTCGCCTCTCATACAGCCTATGCCATGAATCTTTATTTCCA 1259
Query 1260 AAAATCTCCTGAAGACCCTACGGATTGCGATTTCTCTAAAGCCGCGAGGATCACTTCTGA 1319
||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 1260 AAAATCTCCTGAAAACCCTACGGATTGCGATTTCTCTAAAACCGCCAGGATCACTTCTGA 1319
Query 1320 GAACCCTAGT 1329
||||||||||
Sbjct 1320 GAACCCTAGT 1329
> AT4G34480.1 | Symbols: | O-Glycosyl hydrolases family 17 protein
| chr4:16480934-16483995 REVERSE LENGTH=1735
Length=1735
Score = 776 bits (420), Expect = 0.0
Identities = 1057/1359 (78%), Gaps = 66/1359 (5%)
Strand=Plus/Plus
Query 1 ATGGctctctccatcttcttccctctcctcttcgttc-tcttctct-GTTTCGC--CGTC 56
|||||||||||||||| | || | ||||| || || || ||||| ||| | | ||
Sbjct 8 ATGGCTCTCTCCATCTCCATCTATTTCCTCCTC-ATCTTCCTCTCTCACTTCCCATCCTC 66
Query 57 AAATGCACAGTCGTTT-ATCGGAGTAAACTACGGCTTACTAGCCGACAACCTCCCACCAC 115
| ||||| || | ||| |||||||| ||||||||| | | |||||||| ||||| || |
Sbjct 67 ACATGCAGAG-CCTTTCATCGGAGTTAACTACGGCCAAGTCGCCGACAATCTCCCTCCGC 125
Query 116 CGTCCGAAACGGCCAAACTCCTTCAATCTACCTCCA-TCGAGAAAGTGAGGCTATACAAT 174
| || ||||| | ||| ||||| ||||| || || | || ||||||| | || |||
Sbjct 126 CTTCAGAAACCGTCAAGCTCCTCCAATCCACTTCAATTC-AGAAAGTTCGACTTTACGGC 184
Query 175 GCCGATCCCTCCATCATCAAATCCTTGGCAGGCACCGACATCGGCATTGTTATCGGAG-T 233
||||||||| ||||||||||| | ||||| || || | |||| || || ||||| | |
Sbjct 185 GCCGATCCCGCCATCATCAAAGCTTTGGCCGGAACAGGGGTCGGTATCGTCATCGGCGCT 244
Query 234 AGCCAATGGCGATC-TCCCGTCTATGGCCTCTGATTTC-AATGTCGCTTCTCAGTGGATA 291
|| || ||||| | | || ||| | ||||| || | | || | |||| |||| |||||
Sbjct 245 -GCTAACGGCGA-CGTTCCTTCTCTTGCCTCCGA-TCCTAACGCCGCTACTCAATGGATC 301
Query 292 AATTCCAACGTACTTCCTTTCTATCCTGCCTCCAACATCATTCTCATCAATGTCGGCAAC 351
|| ||||| || |||||||| ||||| |||||||| ||||| ||||||| |||||||||
Sbjct 302 AACTCCAATGTCCTTCCTTTTTATCCCGCCTCCAAAATCATGCTCATCACCGTCGGCAAC 361
Query 352 GAGGTGT-TGTTGTCTAATGA-CCTGAATCTAGTGAACCAACTTCTCCCGGCGATGCAAA 409
||| | | || |||| || || || ||||| |||||||| || || |||||||||||||
Sbjct 362 GAGAT-TCTGATGTCGAACGATCC-AAATCTGGTGAACCAGCTACTTCCGGCGATGCAAA 419
Query 410 ATGTTCAAAAGGCCCTCGAGGCGGTTTCACTAGGCAGAAAAATCAAGGTGTCTACGGTCC 469
|||| ||||| ||||| |||||||| || || ||| | ||||||||||| || |||||
Sbjct 420 ATGTCCAAAAAGCCCTTGAGGCGGTGTCTCTCGGCGGGAAAATCAAGGTCTCGACGGTGA 479
Query 470 A-TGCAATGACGGTGCTAGGCAACTCCGAACCGCCATC-AGCTGGTTCATTTGC-TCCTA 526
| | | ||||||||||| || | || || |||||||| ||| ||||||||||| ||
Sbjct 480 ACT-CGATGACGGTGCTCGGTAGTTCAGACCCGCCATCGAGC-GGTTCATTTGCGGCC-G 536
Query 527 GTTATCAGGCTGGTTTAAAGGGCATTCTACAGTTCCTTAGCGATACTGAG-TCGCCTTTT 585
||||||| | ||||||||||| ||| | || || || ||||| |||| | |||||||||
Sbjct 537 GTTATCAAACCGGTTTAAAGGGAATTTTGCAATTTCTAAGCGACACTG-GTTCGCCTTTT 595
Query 586 GCCATCAACCCGTACCCGTTCTTTGCGTACCAGAGCGACCCGAGACCCGAAACGCTGGCG 645
|| || ||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct 596 GCTATTAACCCGTACCCGTTCTTCGCGTACCAAAGTGACCCGAGACCCGAAACGCTGGCG 655
Query 646 TTTTGTCT-TTTCCAGCCTAAC-CCTGGACGGGTAGACTCCAACACTGGAATCAAGTACA 703
|||||||| ||| |||||||| || ||||| || |||||||| || |||||||| ||||
Sbjct 656 TTTTGTCTCTTTG-AGCCTAACGCC-GGACGAGTCGACTCCAAAACCGGAATCAAATACA 713
Query 704 TGAACATGTTCGATGCTCAGGTTGATGCAGTACACTCAGCTTTGAAATCGATGGGATTCG 763
||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct 714 CGAACATGTTCGATGCTCAGGTTGATGCGGTTCACTCGGCTTTGAAATCGATGGGATTCG 773
Query 764 AGAAAGTAGA-AGTGTTGGTAGCCGAAACAGGTTGGCCATCTACCGGTGACAAC-AACGA 821
|||| || || | ||| ||| || |||||||||||| | || | || ||| | |||||
Sbjct 774 AGAAGGTGGAGATTGT-GGTGGCGGAAACAGGTTGGGCGTCAAGAGGGGACG-CTAACGA 831
Query 822 GGTAGGTCCAAGTGTTGAGAATGCTAAGGCTTACAATGGAAATCTCATTGCTCA-CTTAA 880
||| || |||| || || || || || || ||||| ||||| || || ||||| || ||
Sbjct 832 GGTTGGAGCAAGCGTGGATAACGCCAAAGCGTACAACGGAAACCTAATAGCTCATCT-AA 890
Query 881 GGTCCATGGTTGGCACTCCGCTCATGCCCGGCAAATCCA-TCGACACTTACATTTTCGCT 939
|||| ||||||||||| || |||||||| || ||| || | |||||||||||||||||
Sbjct 891 GGTCTATGGTTGGCACACCTCTCATGCCTGGAAAA-CCTGTTGACACTTACATTTTCGCA 949
Query 940 CTCTTTGACGAGAATCTCAAGCCTGGTCCTTCCTTT-GAGCGATCTTTTGGCCTTTTCAA 998
|| | ||| |||||||| |||||||| || || || || || |||| || ||||||||
Sbjct 950 CTGTATGATGAGAATCTAAAGCCTGGACCATC-TTCAGAACGGGCTTTCGGGCTTTTCAA 1008
Query 999 GCCTGATCTTTCCATGGCCTACGACATTGGACTCACTAAAACTA-CTAGTAGTCAGACTT 1057
||||||||||||||| ||| || |||| || | || | || | || ||| || |
Sbjct 1009 AACTGATCTTTCCATGGTCTATGATGTTGGCCTTGCCAAGAGTAGC-AGCAGT-AG--T- 1063
Query 1058 CACAATCTCCA-CAGTTGGGAAAAGCAACATCCAT-GGGATGGTGTGTGCCAAAGGAGGA 1115
|| | | ||| ||| | ||||| ||||| | ||| |||||||| |||||| |||
Sbjct 1064 CAGA--CACCATCAG--G--AAAAGTGACATCG-TCGGGGTGGTGTGTACCAAAGAAGGG 1116
Query 1116 TGCGACTCAA-GAGCAGTTGCAAGATAGTCTAG-ATTGGGTTTGTGGGCAGGGAATCGAT 1173
||| || || ||| |||| |||| || || | |||||| || || || ||||| ||
Sbjct 1117 TGCAACG-AATGAGGAGTTACAAGCGAG-CTTGGATTGGGCGTGCGGACATGGAATAGAC 1174
Query 1174 TGTGGCCCAATA-ATGCCAGGAGGGGTTTGTTTCGAGCCTAACAATCTTGTCTCTCATAC 1232
||||| | ||| | |||||||||| |||||||||||| |||||| | |||||||| |
Sbjct 1175 TGTGGTGCGATACAA-CCAGGAGGGGCTTGTTTCGAGCCGAACAATGTGGTCTCTCACGC 1233
Query 1233 AGCATATGCTATGGATCTTTATTTCCAAAAATCTCCTGAAG-ACCCTACGGATTGCGATT 1291
||||||||| ||| || | ||||| || ||||||||| ||| | ||||| || |||||||
Sbjct 1234 AGCATATGCCATGAATATGTATTTTCAGAAATCTCCT-AAGCAGCCTACAGACTGCGATT 1292
Query 1292 TCTCTAAAGCCGCGAG-GATCACTTCTGAGAACCCTAGT 1329
|||||||| |||| | | ||||||| | |||||||||
Sbjct 1293 TCTCTAAAACCGCAACAG-TCACTTCCCAAAACCCTAGT 1330
> AT5G42720.1 | Symbols: | Glycosyl hydrolase family 17 protein
| chr5:17130186-17132843 FORWARD LENGTH=1746
Length=1746
Score = 198 bits (107), Expect = 1e-49
Identities = 332/436 (76%), Gaps = 34/436 (8%)
Strand=Plus/Plus
Query 544 AAGGGCATT-CTACAGTTCCTTAGCGATACTGAGTCGCCTTTTGCCATCAACCCGTACCC 602
||||| ||| ||| |||| ||| || || | ||||||||| || | ||||| |||||
Sbjct 899 AAGGG-ATTGCTAGAGTTTAATAGTGAAACCGGGTCGCCTTTCGCGGTTAACCCCTACCC 957
Query 603 GTTCTTT-GCGTACC-AGAGCGACCCGAGACCCGAAACGCTGGCGTTTTGTCTT-TTCCA 659
||| ||| || |||| ||| |||| ||||||||||||| |||| | ||| ||| || ||
Sbjct 958 GTT-TTTCGCTTACCAAGA-TGACCGGAGACCCGAAACGTTGGCCTATTG-CTTGTTTCA 1014
Query 660 -GCCTAACCCTGGACGGGTAGACTCCAACACTGGAA--TCAAGTACATGAACATGTTCGA 716
||| || ||||| || || ||| |||||| | || ||||||| ||||||||||||||
Sbjct 1015 GGCC-AATCCTGGCCGTGTCGACCCCAACA--GCAACCTCAAGTATATGAACATGTTCGA 1071
Query 717 TGCTCAGGTTGATGCAGTACACTCAGCTTTGAAATCGATGGGATTCGAGAAAGTAGA-AG 775
||||||||||||||| || | ||||||||||| |||||||| ||| || | ||||| |
Sbjct 1072 TGCTCAGGTTGATGCGGTGTATTCAGCTTTGAACTCGATGGGGTTCAAGGACGTAGAGA- 1130
Query 776 TGTTGGTAGCCGAAACAGGTTGGCCAT-CTACCGGTGACAACA-ACGAGG-TAGGTCCAA 832
| |||| || || || || ||||||| | | || ||| | | |||| | ||| |||
Sbjct 1131 TAATGGTCGCTGAGACTGGATGGCCATACAAG-GGAGACC-CGGAGGAGGCT-GGTGCAA 1187
Query 833 GTGTTGAGAATGCTA-AGGCTTACAATGGAAATCTCATTGCTCACTTAAGGTCCATGGTT 891
|||||||| |||| || |||||||| ||||||||||||||| |||| || ||| |
Sbjct 1188 CAGTTGAGAACGCTAGAG-CTTACAATAAAAATCTCATTGCTCATTTAAAATC--TGGGT 1244
Query 892 --GGCACTCCGCTCATGCCCGGCAAA-TCCATCGACACTTACATT-TTCGC-TCTCTTTG 946
|| || || || |||||||| | | | |||||||| ||| || ||||| | | | |
Sbjct 1245 CCGGGACGCCACTTATGCCCGGGAGAGTG-ATCGACACATAC-TTGTTCGCAT-TGTACG 1301
Query 947 ACGAGAATCTCAAGCC 962
||||||||||||||||
Sbjct 1302 ACGAGAATCTCAAGCC 1317
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66917326485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5