BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480805 Length=1632 Score E Sequences producing significant alignments: (Bits) Value AT2G16405.1 | Symbols: | Transducin/WD40 repeat-like superfami... 2556 0.0 > AT2G16405.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:7105752-7108972 REVERSE LENGTH=1797 Length=1797 Score = 2556 bits (1384), Expect = 0.0 Identities = 1507/1567 (96%), Gaps = 6/1567 (0%) Strand=Plus/Plus Query 68 AAATGGAGGAGAAAACCGGATCATCAGAGGTAGAGATCGTTGAGAAAGACGAAGCGAAGA 127 ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| Sbjct 184 AAATGGAGGAGAAAAACGGATCATCAGAGGTAGAGATCGGAGAGAAAGACGAAACGAAGA 243 Query 128 AACAATCAAAGGATCCTGAGTT-TATAAGCTGTATGATGCAGCCATCAACAGCCGAATCA 186 | ||||||||||||| |||||| | |||||||||||||||||||| |||||| || ||| Sbjct 244 AGCAATCAAAGGATCTTGAGTTCT-TAAGCTGTATGATGCAGCCAAAAACAGCTGATTCA 302 Query 187 GATCCTCAGTACATCGGAATCCGCCGGATTCTTCTTCATCGGAAAGCTGAATCTGGTGTT 246 ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 303 GATCCACACTACATCGGAATCCGCCGGATTCTTCTTCATCGGAAAGCTGATTCTGGCGTT 362 Query 247 ATCTCTCGCCGTTATGATTGGAGATGCAATGGAAAAGGATATGTTGCATATCGTAATTTC 306 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 363 ATCTCTCGCCGTTATGATTGGAGATGCAATGGAAAAGGATATGTTGCTTATCGTAATTTC 422 Query 307 ATTAGCAAACCTAGAAAATGGGAGAATCTGCGAACGCCTAGTCTCTTAAGTAGTCCAGGA 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 ATTAGCAAACCTAGAAAATGGGAGAATCTGCGAACGCCTAGTCTCTTAAGTAGTCCAGGA 482 Query 367 AACAGTGGTCGATGGTTACCGTCTCCGAGTCCTCTTTCCCATCAATTTGAAGCTGAAAGC 426 |||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct 483 AACAGTGGTCGATGGTTACCTTCTCCAAGTCCTCTCTCGCATCAATTTGAAGCTGAAAGC 542 Query 427 TTTACTTCTAGTAGAGATTTACGGAGTGTTAATCAGGTTTCAAGCCATAGAGCGAGTTTT 486 ||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||| Sbjct 543 TTTACTTCTAGTAGAGATTTAAGGAGTGTGAATCAGGTTTCAAGTCGTAGAGCGAGTTTT 602 Query 487 AGTTCAAGTTTGAGTGATGGTGATAATTCATATCGTCGTGGTGGTGTTGAACATGCTTAT 546 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 603 AGCTCAAGTTTGAGTGATGGTGATAATTCATATCGTCGTGGTGGTGTTGAACATGCTTAT 662 Query 547 TCGTTTGTTGGAATGCATTGCATCTTCGATCAATGCAAATCTTCTGTTACTGTTCTCAAG 606 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 663 TCTTTTGTTGGAATGCATTGCATCTTCGATCAATGCAAATCTTCTGTTACTGTTCTCAAG 722 Query 607 TTTGGCCACATGAGTTCTGATTTACTTGCATATGGAGCATCAGATGGAAGCTTAACAGTT 666 ||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 723 TTTGGTCATATGAGTTCTGATATACTTGCATATGGAGCATCAGATGGAAGCTTAACAGTT 782 Query 667 TGTAGTCTCTTAGAAGAGCCTTCTGTCCTCAAGCAGTTGACAGGGCACTCAAAAGATGTC 726 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 783 TGTAGTCTCTTAGAAGAGCCTTCTGTCCTCAAGCAGTTGACAGGTCACTCTAAAGATGTC 842 Query 727 ACAGATTTTGACTTCTCGTCAAACAATCAATACATCGCGTCATCATCACTTGATAAGACA 786 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 ACAGATTTTGACTTCTCGTCAAACAATCAATACATCGCGTCATCATCACTTGATAAGACA 902 Query 787 ATACGAGTATGGGAGTTGTCAAGAGGCGTTTGTATTAGAGTTATATATGGAATCTCTCCA 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 903 ATACGAGTATGGGAGTTGTCAAGAGGCGTTTGTATTAGAGTTATATATGGAATCTCTCCA 962 Query 847 CAGTTTTGTATCCGTTTCCACCCTGTTAATAACAATTTCCTCTCTGCTGGCAATGCAAAC 906 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 963 CAGTATTGTATCCGTTTCCACCCTGTTAATAACAATTTCCTCTCTGCTGGCAATGCAAAC 1022 Query 907 AAGGAACTCACGGTGTTCAATTTCAGCACTGGGAGAATTATTAAAAAACTGTTGTTCGAG 966 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1023 AAGGAACTCACGGTGTTCAATTTCAGCACTGGGAGAATTATTAAAAAACTGTTGTTTGAG 1082 Query 967 GATGAGGTGACATCTATGGACCATGATCACACTGGCCAAATAATTTTCTGTGGAGATGGG 1026 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1083 GATGAGGTGACATCTATGGACCATGATCACACTGGCCAAATAATTTTCTGTGGAGATGGG 1142 Query 1027 CAGGGAACTATATATTCAGTTAGCATGGATTCGCATACAGGTTCATTATCCCGGTCTCAT 1086 ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1143 CAGGGAACTGTATATTCAGTAAGCATGGATTCGCATACAGGGTCATTATCCCGGTCTCAT 1202 Query 1087 CGCCATCGTACTAATCATAAATCCCCTGTCACAACTGTGAAGTACCGAAGCTTCTCCCTC 1146 || |||||||| ||||| ||||| |||||||| |||||||||||| |||||||||||||| Sbjct 1203 CGTCATCGTACAAATCACAAATCTCCTGTCACCACTGTGAAGTACAGAAGCTTCTCCCTC 1262 Query 1147 CTGGCATCAGGCCCTGTTCTGCTCACATGTACTCAAGACGGAAACTTGTGTTTCTTTAGT 1206 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 1263 CTGGCATCAGGCCCTGTTCTGCTCACATGTACTCAGGACGGAAACTTGAGTTTCTTTAGT 1322 Query 1207 GTTGCTCTTCAGATAAAAGGTTATCTGACTTTGCGTTGCTCCCTCAAATTAGCCCCGCGA 1266 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1323 GTTGCCCTTCAGATAAAAGGTTATTTGACTTTGCGTTGCTCCCTCAAATTAGCCCCGCGA 1382 Query 1267 ATACACAGAATCCAAGCATCGTTTTGCCCGCTATTATCCCTAGAGAAAGGAGAATACATA 1326 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1383 ATACACAGAATCCAAGCATCGTTTTGCCCGCTATTATCACTAGAGAAAGGAGAATACATA 1442 Query 1327 GTTGCTGGAAGCGAAGACTCGAATGTCTACTTCTATGATCTAACCAAACCAAAGCACACA 1386 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1443 GTTGCTGGAAGCGAAGACTCGAATGTCTACTTCTATGATCTAACCAAACCGAAGCACACA 1502 Query 1387 TGTGTAAACAAGCTACAGGGTCACAGGTTTCCAGTAATGTGTGTTGCGTGGAACCATGGT 1446 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1503 TGTGTAAACAAGCTACAGGGTCACAGGTTTCCAGTAATGTGTGTTGCGTGGAACCATGGG 1562 Query 1447 GAGAACTTGTTGGCTTCGTCTGATTTCTATGGTGTTGTCATTGTATGGAAAAGAGCAAAG 1506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1563 GAGAACTTGTTGGCTTCGTCTGATTTCTATGGTGTTGTCATTGTATGGAAAAGAGCAAAG 1622 Query 1507 ACAAGCTCATAAGGTTTGTCTATAATATTATAAATGAATCTAAATCAGCCATTTTTGCCA 1566 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1623 ACAAGCTCATAAGGTTTGTCTATAATATTATAAATGAATCTAAATCCGTCATTTTTGCCA 1682 Query 1567 GAAAGGCTTTTGGTTTTGCTTCATCTCTGCGGTATCGCTAATCTCAAA-CTGTGTCAATT 1625 ||||||||| ||||| || ||||||||| |||||||||||||||| ||||||||||| Sbjct 1683 CAAAGGCTTTGGGTTTGGCATCATCTCTG---TATCGCTAATCTCAAAACTGTGTCAATT 1739 Query 1626 TAGTTTC 1632 ||||||| Sbjct 1740 TAGTTTC 1746 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80622075270 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5