BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480823
Length=2421
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19090.1 | Symbols: | Protein of unknown function (DUF630 a... 3701 0.0
AT4G30130.1 | Symbols: | Protein of unknown function (DUF630 a... 191 3e-47
> AT2G19090.1 | Symbols: | Protein of unknown function (DUF630
and DUF632) | chr2:8265178-8267879 REVERSE LENGTH=2445
Length=2445
Score = 3701 bits (2004), Expect = 0.0
Identities = 2313/2456 (94%), Gaps = 46/2456 (2%)
Strand=Plus/Plus
Query 1 ATGGGATGTTCTCATTCAAAGTTAGATGATGAAGAAGCAGTTCAGATCTGTAAAGATAGG 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1 ATGGGATGTTCTCATTCCAAGTTAGATGATGAAGAAGCAGTTCAGATCTGTAAAGACAGG 60
Query 61 AAACGTTTCATCAAACAAGCTATAGAACATAGAACTAAGTTTGCTTCTGGTCACATTGCT 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 61 AAACGTTTCATCAAACAAGCTATTGAACATAGAACTAAGTTTGCTTCTGGTCACATTGCT 120
Query 121 TATATTCACTCTCTTAGAAATGTCTCTGATGCTCTCCATGACTTTATTATCCAAGGAGAC 180
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 121 TATATTCACTCTCTTAGAAAAGTCTCTGATGCTCTCCATGACTTTATCCTCCAAGGAGAC 180
Query 181 AACAACAATGAGTTTGTTCTTCCGATGAGTCAAGACTCATTCGTCACTCCTGTTAAGAGA 240
||||||||||||||||||| | | | |||||||||||||||||||||| || ||||||
Sbjct 181 AACAACAATGAGTTTGTTCCTACTCTCTGTCAAGACTCATTCGTCACTCCGGTCAAGAGA 240
Query 241 AT---------A------C----CA--CGTAGTAATAGCGGTGAGTTCATCTCGATTTCG 279
|| | | || |||||||||||||||||||||||||| ||||||
Sbjct 241 ATGCCACAGAGACGTCGTCGAAGCAGCCGTAGTAATAGCGGTGAGTTCATCTCCATTTCG 300
Query 280 CCTTCTTCGATTCCTCCGAAAATGATTC-AGAGTAGGCCAAGATCGAATGTGAAAGCGAA 338
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 301 CCTTCTTCGATTCCTCCGAAAATGATTCAAG-GTAGGCCAAGATCGAATGTGAAAGCGAA 359
Query 339 TTACTTGATGGCTAATAGAAGTAGACCGGTTAGAGTAGAACAGAGATCTCCTGAAACGTT 398
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 360 TTATTTGATGGCTAATAGAAGTAGACCGGTTAGAGTCGAACAGAGATCTCCTGAAACGTT 419
Query 399 TAGAGTCGAGACATTTTCACCACC------TAGTAACCAATATGGTGAAGCAGATGGTTT 452
|||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct 420 TAGAGTTGAGACATTTTCTCCACCTAGTAGTAGTAACCAATATGGTGAATCAGATGGTTT 479
Query 453 CTTTGGAATGAATATGAATATGAATATGAATACTTCTGCGTCTACTTCATCTTCGTTTTG 512
|||| | | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 CTTT-G---G-A-ATGAATATGAATATGAATACTTCTGCGTCTACTTCATCTTCGTTTTG 533
Query 513 GAATCCGTTGAGTTCTCCTGAGCAAAGGTTAAGTAGTCATAACATTCCTCCTCCTTCACC 572
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 GAATCCGTTGAGCTCTCCTGAGCAAAGGTTAAGTAGTCATAACATTCCTCCTCCTTCACC 593
Query 573 GCAGAATTCGCAGTGGGATTTCTTTTGGAATCCGTTTTCGTCATTGGATTATTATGGATA 632
|||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct 594 GCAGAATTCGCAGTGGGATTTCTTCTGGAATCCGTTTTCTTCGTTGGATTATTATGGATA 653
Query 633 TAATAGTTATGATAGAGGAAGTGTTGATAATAGGAGTGGTATAGATGATGAGATTAGAGG 692
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 654 CAATAGTTATGACCGAGGAAGTGTTGATAGTAGGAGTGGTATAGATGATGAGATTAGAGG 713
Query 693 GTTGAGACGTGTTAGAGAGGAAGAAGGGATTCCGGATTTGGAAGAAGATGATGAACCTAA 752
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 714 ATTGAGACGTGTTAGAGAGGAAGAAGGGATTCCTGATTTGGAAGAAGATGATGAACCTCA 773
Query 753 TGAACCTGAACCTGT-G--AATGTGCGGTTTCAGAATCATAATCCGAATCCGAAAGCAAC 809
| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TAAACCTGAACCTGTCGTCAATGTGCGGTTTCAGAATCATAATCCGAATCCGAAAGCAAC 833
Query 810 GGAAGAGAGTAGAGGTAAAGTTGATAAGAGTTGTTGCAATGAGGAAGTTAAAGTtgaaga 869
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 834 GGAAGAGAATAGAGGTAAAGTTGATAAGAGTTGTTGCAATGAGGAAGTTAAAGTTGAAGA 893
Query 870 tgttgatgaggacgaggatgaggacgaggatgaagatgaggatgatgagTTTACGGATAG 929
|||||||||||| || || ||||| ||| || || || ||||||||||||||||||||
Sbjct 894 TGTTGATGAGGATGAAGACGAGGA--TGGA-GATGAGGATGATGATGAGTTTACGGATAG 950
Query 930 CGGGTGTGA-ATCTGAGAATGAGGGAGATGAGAAATGCGTTG--CC-CCAACGCAAGAAC 985
||||||||| | |||||||||||||||| ||||||||||||| || |||||||||||||
Sbjct 951 CGGGTGTGAGA-CTGAGAATGAGGGAGACGAGAAATGCGTTGCTCCTCCAACGCAAGAAC 1009
Query 986 AGCGAAAAGCTGAGGTGTCTAGAGGAGGAGAAACTACAGGGAATGTTGTTGGAGTAGGTA 1045
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 1010 AGCGAAAAGCTGAGGTGTGTAGAGGAGGAGAAGCTACAGGGAATGTTGTTGGAGTAGGTA 1069
Query 1046 AGGTTCAAGAGATGAAGAATGTTGTTGGTGTTAGAGATGATGCAAAGATGACGGGTTTCA 1105
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1070 AGGTTCAAGAGATGAAGAATGTTGTTGGTGTTAGAGATGATGCAAAGACGACGGGGTTCA 1129
Query 1106 CGGTATATGTGAACCGGAGACCAACTAGCATGGCTGAAGTAATCAAAGATCTTGAAGATC 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1130 CGGTATATGTGAACCGGAGACCAACTAGCATGGCTGAAGTAATCAAAGATCTTGAAGATC 1189
Query 1166 AGTTCGCAACCATTTGTGATGCGGCTAAGGAAGTTTCAGGGCTATTGGAAGCTAGTAGAG 1225
||||| |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 1190 AGTTCACAACAATTTGTGATGCGGCTAAGGAAGTCTCGGGGCTATTGGAAGCTGGTAGAG 1249
Query 1226 CTCAATACACATCATCCTCCAATGACCATAGTGCCAGGAAAATGCTGAATCCAGTAGCGT 1285
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 CTCAATACACATCATCCTTTAATGACCATAGTGCCAGGAAAATGCTGAATCCAGTAGCGT 1309
Query 1286 TGTTCCGCTCGGGTTCATCAAGATCTTCCTCTTCAAGATTCTTGATCACTTCTTCTGGTG 1345
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1310 TGTTCCGCTCGGGTTCATCAAGATCTTCCTCGTCAAGATTCTTGATCACTTCTTCTGGTG 1369
Query 1346 GTTCGAGAGAGAGCGGGTCTGAAAGCAGAAGCGATGTTTCAGATGAATCTTGTATGATTT 1405
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1370 GTTCAAGAGAGAGCGGGTCTGAAAGCAGAAGCGATGTTTCAGATGAATCTTGCATGATTT 1429
Query 1406 CTGGTAGCCACCAAACAACATTGGACAGACTTTTCGCGTGGGAGAAGAAACTCTACGATG 1465
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1430 CAGGTAGCCACCAAACAACATTGGACAGACTTTTCGCGTGGGAGAAGAAACTCTATGATG 1489
Query 1466 AAGTTAGGTCTGGAGAACGTGTTCGAAGAGCATATGAGAAGAAATGTATGCAACTGAGGA 1525
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1490 AAGTTAGGTCTGGAGAACGTGTTCGAAGAGCATATGAAAAGAAATGTATGCAGCTGAGGA 1549
Query 1526 ATCAGGACGTGAAAGGAGATGATCCGCTTGCGGTTGATAAAACTAGGGCTACGATCAGAG 1585
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1550 ATCAGGACGTGAAAGGAGATGATCCGCTTGCGGTTGATAAAACTAGGGCTACTATCAGAG 1609
Query 1586 ATCTAGACACACAGATCAAGGTGTCAATACACTCCATTGAATCCATCTCCAAAAGAATCG 1645
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1610 ATCTAGATACACAGATCAAGGTGTCAATACACTCCATTGAATCCATCTCCAAAAGAATCG 1669
Query 1646 AGACTCTTCGTGACCAAGAACTATTGCCTCAGCTTCTTGAGCTCGTTGAAGGATTAACAA 1705
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1670 AGACTCTTCGTGACCAAGAACTGTTGCCTCAGCTTCTTGAGCTCGTTGAAGGATTAACAA 1729
Query 1706 GGATGTGGAAAGTGATGGCAGAAAGTCACCAGATACAGAAACGAACACTAGATGAAGCCA 1765
||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1730 GGATGTGGAAAGTAATGGCGGAAAGTCACCAGATACAGAAACGAACACTAGACGAAGCCA 1789
Query 1766 AACTGTTACTTGCAGGGACACCAGTTTCAAAACGTCACAAGAAGAGACAACCTCCAATAT 1825
|||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1790 AACTGTTACTTGCAGGCACACCGGTTTCAAAGCGTCACAAGAAGAGACAACCTCCAATAA 1849
Query 1826 TGCCAGAGGCTATTAACTCTCAAAGATTAGCTCAATCTGCTTTGAATCTTGAAGCTCAGC 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 TGCCAGAGGCTATTAACTCTCAAAGATTAGCTCAATCTGCTTTGAATCTTGAAGCTCAGC 1909
Query 1886 TTCGAAACTGGAGAGCCTGTTTTGAATTCTGGATCACCTCTCAGAGATCCTATATGAAAG 1945
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1910 TTCGAAACTGGAGAACCTGTTTTGAATTCTGGATCACCTCTCAGAGATCCTACATGAAAG 1969
Query 1946 CATTATCCGGTTGGCTTCTCAGATGTTTCAGATGCGATCCTGACCCCGAGAAAGTTAGAT 2005
||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct 1970 CATTATCTGGTTGGCTTCTAAGATGTTTCAGATGTGATCCTGACCCCGAAAAAGTTAGAT 2029
Query 2006 TATCCTCATGTCCTCACCCGATATACCGAGTCTGCATTCAATGGGCAAGGTTGCTTAACA 2065
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2030 TATCCTCATGTCTTCACCCGATATACCGAGTCTGCATTCAATGGTCAAGGTTGCTTAACA 2089
Query 2066 GCTTGAACGAGAAACCGGTTTTGGACAAACTTGAGTTCTTTGCCTCAGGGATGGGTTCAA 2125
||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2090 GCTTGAATGAAAAACCAGTTTTGGACAAACTTGAGTTCTTTGCCTCAGGGATGGGTTCAA 2149
Query 2126 TATATGCAAGGCAAGTTAGAGAAGATCCAAATTGGAGTGGAAGCGGGTCAAGGAGATATT 2185
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct 2150 TATATGCAAGGCAAGTTAGGGAAGATCCAAACTGGAGTGGAAGCGGGTCAAGGAGATACT 2209
Query 2186 CCGGGTCAGAAAGCATGGACCTTGTGGTGGCTGATAAGCTAGAAGAAGATGTTGTGATGA 2245
||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||
Sbjct 2210 CCGGGTCAGAAAGCATGGAGCTTGTAGTGGCTGATAAGGGAGAAGAAGATGTTGTGATGA 2269
Query 2246 CTGCTGAGAAACTTGCAGAGGTTGCAGTGAAGGTTCTCTGCCATGGAATGTCTGTTGCAG 2305
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2270 CTGCTGAGAAACTTGCAGAGGTTGCTGTGAAGGTTCTCTGCCATGGAATGTCTGTTGCAG 2329
Query 2306 TGAGTTCACTCGCTGAGTTTTCCATCAACTCGGCTGATGAACACTCAAAGCTTGTTAACC 2365
| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct 2330 TTAGTTCACTAGCTGAGTTTTCCATCAACTCGGCCGATGAACACTCGAAGCTTGTTAGCC 2389
Query 2366 AACCAGCGGACGATACATCGGAGCAGCAGCCCGCGGATGTAAATTTCAATTCCTAG 2421
||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct 2390 AACCAGCAGACGATGCGTCGGAGCAGCAGCCCCCGGATGTAAATTTCAATTCCTAG 2445
> AT4G30130.1 | Symbols: | Protein of unknown function (DUF630
and DUF632) | chr4:14734819-14737978 FORWARD LENGTH=2506
Length=2506
Score = 191 bits (103), Expect = 3e-47
Identities = 140/158 (89%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 1 ATGGGATGTTCTCATTCAAAGTTAGATGATGAAGAAGCAGTTCAGATCTGTAAAGATAGG 60
||||||||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||
Sbjct 144 ATGGGATGTTCTCATTCGAAGTTTGATGACGATGAAGCTGTTCAGATCTGTAAAGATAGG 203
Query 61 AAACGTTTCATCAAACAAGCTA-TAGAACATAGAACTAAGTTTGCTTCTGGTCACATTGC 119
|||||||||||||||||||| | | |||||||| ||| |||||||||||||||||||||
Sbjct 204 AAACGTTTCATCAAACAAGC-AGTGGAACATAGGACTGGGTTTGCTTCTGGTCACATTGC 262
Query 120 TTATATTCACTCTCTTAGAAATGTCTCTGATGCTCTCC 157
|||||| || ||||| || || || || ||||||||||
Sbjct 263 TTATATCCAGTCTCTGAGGAAGGTTTCAGATGCTCTCC 300
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120230305275
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5