BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480825 Length=1514 Score E Sequences producing significant alignments: (Bits) Value AT2G19070.1 | Symbols: SHT | spermidine hydroxycinnamoyl transf... 2309 0.0 AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfam... 737 0.0 > AT2G19070.1 | Symbols: SHT | spermidine hydroxycinnamoyl transferase | chr2:8260038-8261985 REVERSE LENGTH=1530 Length=1530 Score = 2309 bits (1250), Expect = 0.0 Identities = 1433/1520 (94%), Gaps = 17/1520 (1%) Strand=Plus/Plus Query 1 AAAAGAAAGGGTGTTTGTGTTATGGCTCCCATAATTTTTAGAAAATCTTACACTATAGTA 60 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 7 AAAAGAAAGGGGGTTTGTGTTATGGCTCCCATAACTTTTAGAAAATCTTACACTATAGTA 66 Query 61 CCGGCCGAACCAACGTGGACCGGTCGGTTTCCAC-TAGCCGAGTGGGATCAAGTTGGTAC 119 ||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||| Sbjct 67 CCGGCCGAACCAACGTGGAGCGGTAGGTTTCC-CTTAGCCGAGTGGGATCAAGTTGGTAC 125 Query 120 AATAACTCACATTCCCACCCTTTA-TTTCTATGATAAGCCATCTGAATCTTTCCAAGGCA 178 ||| |||||||||||||||||||| ||| || || ||||||||||||||||||||||||| Sbjct 126 AATTACTCACATTCCCACCCTTTACTTT-TACGACAAGCCATCTGAATCTTTCCAAGGCA 184 Query 179 ATGTAGTCGAAACCCTAAAAGA-GTCGTTGAGCCGTGTGCTAGTCCATTTTTACCCCATG 237 |||||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct 185 ATGTAGTCGAAATCCTAAAA-ACCTCGTTGAGCCGTGTGCTAGTCCATTTTTACCCTATG 243 Query 238 GCTGGCCGTCTCAGATGGCTCCCTCGGGGGCGATTCGAGCTCAATTGTAACGCCGAGGGA 297 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 244 GCTGGCCGTCTCAGATGGCTCCCTCGGGGACGGTTCGAGCTCAATTGTAACGCCGAGGGA 303 Query 298 GTGGAATTCATCGAAGCGGAATCCGAAGGAAAGCTTTCGGATTTCAAAGATTTCTCTCCT 357 ||||||||||| ||||||||||| || || |||||||||||||||||||| ||||||||| Sbjct 304 GTGGAATTCATTGAAGCGGAATCTGAGGGGAAGCTTTCGGATTTCAAAGACTTCTCTCCT 363 Query 358 ACGCCGGAATTCGAGAATCTTATGCCGCAAGTAAACTATAAAAACCCTATCGAAACGATT 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364 ACGCCGGAATTCGAGAATCTTATGCCGCAAGTAAACTATAAAAACCCTATCGAAACGATT 423 Query 418 CCTCTATTTTTAGCTCAGCTTACCAAATTCAAATGCGGTGGATTAAGCCTTAGCGTCAAC 477 |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| Sbjct 424 CCTCTATTTTTAGCTCAGGTAACCAAATTCAAATGCGGTGGAATAAGCCTTAGCGTCAAC 483 Query 478 GTTTCCCACGCGATCGTCGATGGCCAAAGCGCGCTTCACTTAATATCGGAATGGGGAAGA 537 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 484 GTTTCCCACGCGATCGTAGATGGCCAAAGCGCGCTTCACTTAATATCGGAATGGGGAAGA 543 Query 538 CTAGCGCGCGGTGAACCTTTAGAAACCGTTCCATTTCTAGACAGGAAAATCCTCTGGGCT 597 || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 544 CTCGCGCGCGGTGAACCGTTAGAAACCGTTCCATTTCTAGACCGGAAAATCCTCTGGGCT 603 Query 598 GGTGAACCTCTCCCACCGTTTGAGTCGCCGCCAAAGTTCGATCACAAAGAGTTTGATCAG 657 |||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||| Sbjct 604 GGTGAACCGCTCCCACCGTTTGTGTCGCCCCCAAAGTTCGACCACAAAGAGTTTGATCAG 663 Query 658 CCACCGTTTTTGATCGGAGAAACGGACAATGTAGAAGAGAGAAAGAAGAAGACGATTGTT 717 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 664 CCACCGTTTTTGATCGGAGAAACGGACAATGTAGAAGAGAGAAAGAAGAAAACGATTGTG 723 Query 718 GTCATGCTAAAACTGAGCAAATCTCAGCTGGAGAAGCTAAGAAGTAAAGCGAACGCAAGC 777 || |||||| |||||||| |||||||||| |||||||| |||||||||| |||| |||| Sbjct 724 GTGATGCTACCACTGAGCACATCTCAGCTGCAGAAGCTACGAAGTAAAGCCAACGGAAGC 783 Query 778 AAATACGCTGACCCAGCGAAAGGGTTTACACGGTACGAGACCGTCACGGGACACGTGTGG 837 ||| || ||||||| ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 784 AAACACTCTGACCCGGCGAAAGGGTTTACAAGGTACGAGACCGTCACCGGACACGTGTGG 843 Query 838 AGGTGCGCGTGTAAAGCACGTGGCCATTCTCCGGAGCAACCCACGGCTCTAGGAATCTGT 897 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 844 AGGTGCGCGTGTAAAGCACGTGGCCACTCTCCGGAGCAACCAACGGCTCTAGGAATCTGT 903 Query 898 ATAGATACTCGTAGTCGGATGCAGCCACCTCTGCCCCGTGGCTACTTCGGCAATGCTACT 957 ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||| Sbjct 904 ATAGATACTCGTAGTCGGATGGAGCCACCTCTGCCACGCGGCTACTTCGGCAATGCTACT 963 Query 958 CTTGACGTGGTCGCAGCAAGCACCTCAGGCGAACTGATATCGAATGAATTGGGTTTCGCG 1017 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 964 CTTGACGTGGTCGCAGCAAGCACCTCAGGTGAACTGATATCGAATGAATTGGGTTTCGCG 1023 Query 1018 GCGAGTTTAATCAGTAAAGCCATAAAGAATGTAACAAACGAATACGTGATGATTGGGATA 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1024 GCGAGTTTAATCAGTAAAGCCATAAAGAATGTAACAAACGAATACGTGATGATTGGGATA 1083 Query 1078 GAGTATCTTAAGAACCAAAAAGATCTGAAGAAGTTTCAAGACCTACATGCCTTGGGAAGC 1137 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1084 GAGTATCTTAAGAACCAAAAAGATCTGAAGAAGTTTCAAGATCTACATGCCTTGGGAAGC 1143 Query 1138 GCGGAAGGTCCATTCTATGGAAACCCTAATCTTGGATTGGTTAGCTGGTTAACTTTGCCA 1197 |||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||| Sbjct 1144 ACGGAAGGTCCATTCTACGGAAACCCAAATCTTGGAGTGGTGAGCTGGTTAACTTTGCCA 1203 Query 1198 ATGTATGGCCTTGATTTCGGATGGGGCAAGGAGTTCTACACGGGACCAGGCACGCATGA- 1256 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1204 ATGTACGGCCTTGATTTCGGATGGGGCAAAGAGTTCTACACGGGACCAGGCACGCATGAC 1263 Query 1257 TTTCGACGGTGACTCGCTGATCTTGCCGGATCAAAACGAAGATGGCTCGGTGATTCTTGC 1316 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1264 TTT-GACGGCGACTCGCTGATCTTGCCGGATCAAAACGAAGATGGCTCGGTGATTCTCGC 1322 Query 1317 TACGTGTCTACAGGTGGCTCACATGGAGGCCTTCAAGAAACACTTCTATGACGATATCTA 1376 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1323 GACGTGTCTACAGGTGGCTCACATGGAGGCCTTCAAGAAACACTTTTATGAAGATATCTA 1382 Query 1377 GGC-TTGTCTCTTTTT-ATATACATGACGTATACAAATATTTATGCATTTTCATTTGAAT 1434 ||| || | | ||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 1383 GGCCTTATATGTTTTTTATATACATGACGTATACAAATATTTATGCACTTTCATTTGAAT 1442 Query 1435 TCTACTTATATTGTTGTGATTATTGAATTGTAATAACAAATTCACACATAAACTATATAT 1494 |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| Sbjct 1443 TCTACTTATATTGTAGTGATTATTGAATTGTAATAACAGATTC-----TAAACTATATAT 1497 Query 1495 ATTATTGTTTTTACTATAAT 1514 | |||||| |||||| ||| Sbjct 1498 -T-ATTGTTCTTACTACAAT 1515 > AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfamily protein | chr2:8257000-8260545 FORWARD LENGTH=1811 Length=1811 Score = 737 bits (399), Expect = 0.0 Identities = 469/501 (94%), Gaps = 11/501 (2%) Strand=Plus/Minus Query 1017 GGCGAGTTTAATCAGTAAAGCCATAAAGAATGTAACAAACGAATACGTGATGATTGGGAT 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1811 GGCGAGTTTAATCAGTAAAGCCATAAAGAATGTAACAAACGAATACGTGATGATTGGGAT 1752 Query 1077 AGAGTATCTTAAGAACCAAAAAGATCTGAAGAAGTTTCAAGACCTACATGCCTTGGGAAG 1136 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1751 AGAGTATCTTAAGAACCAAAAAGATCTGAAGAAGTTTCAAGATCTACATGCCTTGGGAAG 1692 Query 1137 CGCGGAAGGTCCATTCTATGGAAACCCTAATCTTGGATTGGTTAGCTGGTTAACTTTGCC 1196 | |||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 1691 CACGGAAGGTCCATTCTACGGAAACCCAAATCTTGGAGTGGTGAGCTGGTTAACTTTGCC 1632 Query 1197 AATGTATGGCCTTGATTTCGGATGGGGCAAGGAGTTCTACACGGGACCAGGCACGCATGA 1256 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1631 AATGTACGGCCTTGATTTCGGATGGGGCAAAGAGTTCTACACGGGACCAGGCACGCATGA 1572 Query 1257 -TTTCGACGGTGACTCGCTGATCTTGCCGGATCAAAACGAAGATGGCTCGGTGATTCTTG 1315 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1571 CTTT-GACGGCGACTCGCTGATCTTGCCGGATCAAAACGAAGATGGCTCGGTGATTCTCG 1513 Query 1316 CTACGTGTCTACAGGTGGCTCACATGGAGGCCTTCAAGAAACACTTCTATGACGATATCT 1375 | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 1512 CGACGTGTCTACAGGTGGCTCACATGGAGGCCTTCAAGAAACACTTTTATGAAGATATCT 1453 Query 1376 AGGC-TTGTCTCTTTTT-ATATACATGACGTATACAAATATTTATGCATTTTCATTTGAA 1433 |||| || | | ||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1452 AGGCCTTATATGTTTTTTATATACATGACGTATACAAATATTTATGCACTTTCATTTGAA 1393 Query 1434 TTCTACTTATATTGTTGTGATTATTGAATTGTAATAACAAATTCACACATAAACTATATA 1493 ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| Sbjct 1392 TTCTACTTATATTGTAGTGATTATTGAATTGTAATAACAGATTC-----TAAACTATATA 1338 Query 1494 TATTATTGTTTTTACTATAAT 1514 | | |||||| |||||| ||| Sbjct 1337 T-T-ATTGTTCTTACTACAAT 1319 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74698410960 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5