BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480827
Length=1050
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19050.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 1635 0.0
AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfam... 1094 0.0
> AT2G19050.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr2:8253416-8255534 FORWARD LENGTH=1050
Length=1050
Score = 1635 bits (885), Expect = 0.0
Identities = 997/1052 (95%), Gaps = 4/1052 (0%)
Strand=Plus/Plus
Query 1 ATGGCCGAGGCAATGTTCAAAACGTTGTTGTTGGTCTTTGCGGCCACGGCTA-TTGCAAC 59
|||||||||||||| |||||| |||||||||||||| ||||| |||| || | |||||||
Sbjct 1 ATGGCCGAGGCAATATTCAAAGCGTTGTTGTTGGTCATTGCGACCACCGC-ATTTGCAAC 59
Query 60 GGCCGAGGCAGCTCTTGGACAGCGAGTGCCTTGCTATTTCATTTTCGGAGACTCCGTCTT 119
| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 60 GACCGAGGCGGCTCTTGGACAGCGAGTGCCTTGCTATTTTGTTTTCGGAGACTCCGTCTT 119
Query 120 CGACAATGGTAACAACAATGTCTTGAATACCTCGGCCAAAGTCAACTATTCACCTTACGG 179
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 120 CGACAATGGTAACAACAATGTCCTGAATACCTCGGCCAAAGTCAACTATTCACCCTACGG 179
Query 180 TAATGATTTTGCTAGAGGTCCTACCGGCCGGTTCAGCAATGGTCGTAATATTCCTGACAT 239
|| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 180 TATTGATTTTGCTAGAGGTCCTACCGGCCGTTTCAGCAATGGTCGTAACATTCCTGACAT 239
Query 240 TATCGCTGAACAAATGAGATTCAGTGATTACATTCCACCGTTCACGGGAGCATCGGCGGA 299
||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 240 TATCGCTGAGCTAATGAGATTCAGTGATTACATTCCACCGTTCACGGGAGCATCACCGGA 299
Query 300 ACAAGCTCACACCGGAATAAACTACGCTTCTGGTGGCGGCGGAATTCGTGAAGAAACTAG 359
||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 300 ACAAGCTCACATCGGAATAAACTACGCTTCTGGTGGAGGCGGAATACGTGAAGAAACTAG 359
Query 360 CCAACATTTGGGTGGAAGAATCAGTTTTAAAAGGCAAATAAAGAATCACCGGTCGATGAT 419
|||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 360 CCAACATTTGGGTGAAATAATCAGTTTTAAAAAGCAAATAAAGAATCACCGGTCGATGAT 419
Query 420 TATGACGGCTAAAGTTCCAGAGGAGAAGCTGAATAAATGTCTATACACAATTAATATTGG 479
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TATGACGGCTAAGGTTCCAGAGGAGAAGCTGAATAAATGTCTATACACAATTAATATTGG 479
Query 480 AAGCAATGATTATCTCAACAACTATTTCATGCCGGCTCCATACATGACCAATAAGAAGTT 539
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 480 AAGCAATGATTATCTCAACAACTATTTTATGCCGGCTCCATATATGACCAATAAGAAGTT 539
Query 540 CAGTTTCGATGAATATGCTGATTCTCTCATTCGAAGTTATCGCTCTCATTTGAAGTCATT 599
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 540 CAGTTTCGATGAATATGCAGATTCTCTCATTCGAAGTTATCGCTCTTATTTGAAGTCATT 599
Query 600 GTATGTTCTAGGAGCAAGAAAGGTTGCTGTGTTTGGGGTGAGTAAGCTCGGATGCACGCC 659
||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 600 GTACGTTCTAGGAGCAAGGAAGGTCGCTGTGTTTGGGGTGAGTAAGCTCGGATGCACGCC 659
Query 660 GCGTATGATTGCCTCCCATGGTGGCGGTAATGGCTGTGCTGCCGAAGTAAACAAAGCGGT 719
|||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| ||
Sbjct 660 GCGTATGATTGCCTCCCATGGTGGTGGTAATGGTTGTGCTGCTGAAGTGAACAAAGCTGT 719
Query 720 AGAACCTTTCAACAAGAACCTCAAAGCTCTTGTCTATGAATTCAACCGAAACTTTGCTGA 779
|||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 720 AGAACCTTTCAATAAGAACCTCAAAGCTCTTGTCTATGAATTCAACCGAGATTTTGCTGA 779
Query 780 TGCTAAGTTCACCTTCGTTGATATCTTTAGCGGCCAAACTCCTTTCGCGTTTTTCATGTT 839
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 780 TGCTAAGTTCACCTTCGTTGATATCTTTAGCGGCCAAAGTCCTTTCGCGTTTTTCATGTT 839
Query 840 AGGGTTTAGGGTAACAAACAAAAGCTGTTGTACGGTAAAACCAGGGGAAGAACTTTGTGC 899
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 840 AGGGTTTAGGGTAACAGACAAAAGTTGTTGTACGGTAAAACCAGGGGAAGAACTTTGTGC 899
Query 900 GACAAATGAACCGGTTTGTCCAGCTCGAAGATGGTACGTGTACTGGGACAACGTCCACAG 959
||||||||||||||| ||||||| || |||| |||| |||||||||||||| ||||||||
Sbjct 900 GACAAATGAACCGGTCTGTCCAGTTCAAAGACGGTATGTGTACTGGGACAATGTCCACAG 959
Query 960 CACAGAAGCAGCCAATATGGTCGTTGCAAAGGCTGCGTT-TACCGGACTCATTACGTCTC 1018
||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||
Sbjct 960 CACAGAAGCAGCCAATATGGTGGTTGCAAAGGCTGC-TTATGCCGGACTCATTACGTCTC 1018
Query 1019 CTTACAGTCTTTCTTGGCTTGCAAGATTATAG 1050
||||||||||||||||||||||||||||||||
Sbjct 1019 CTTACAGTCTTTCTTGGCTTGCAAGATTATAG 1050
> AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfamily
protein | chr2:8257000-8260545 FORWARD LENGTH=1811
Length=1811
Score = 1094 bits (592), Expect = 0.0
Identities = 895/1038 (86%), Gaps = 33/1038 (3%)
Strand=Plus/Plus
Query 1 ATGGCCGAGGCAATGTTCAAAACGTTGTTGTTGGTCTTTGCGGCCACGGCTATTGCAACG 60
|||||||| |||||||||| | |||||| ||| |||| |||||||| ||| | |
Sbjct 32 ATGGCCGATAAAATGTTCAAAGCATTGTTG-TGGGCTTT--TGCCACGGCGGTTGTGATG 88
Query 61 GCCGAGGCAGCTCTTGGACAGCGAGTGCCTTGCTATTTCATTTTCGGAGACTCCGTCTTC 120
|||||||| | || |||||| | ||| |||||||||||| ||||||||||||| ||||||
Sbjct 89 GCCGAGGCTGTTCGTGGACAACTAGTCCCTTGCTATTTCGTTTTCGGAGACTCTGTCTTC 148
Query 121 GACAATGGTAACAACAATGTCTTGAATA-CCTCGGCCAAAGTCAACTATTCACCTTACGG 179
||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||
Sbjct 149 GACAATGGTAACAACAATGAGTTGGATACCCT-GGCCAAAGTCAACTATTCACCTTACGG 207
Query 180 TAATGATTTTGCTAGAGGTCCTACCGGCCGGTTCAGCAATGGTCGTAATATTCCTGACAT 239
|| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
Sbjct 208 TATTGATTTTGCTAGAGGTCCTACCGGGAGGTTCAGCAATGGTCGTAATATTCCCGACTT 267
Query 240 TATCGCTGAACAAATGAG-ATTCAGTGATTACATTCCACCGTTCACGGGAGCATCGGCGG 298
|||||||||| || |||| ||| ||| || |||||||||| ||||| |||||||| |||
Sbjct 268 TATCGCTGAAGAATTGAGAATT-AGTTATGACATTCCACCATTCACCAGAGCATCGACGG 326
Query 299 AACAAGCTCACACCGGAATAAACTACGCTTCTGGTGGCGGCGGAATTCGT-GAAGAAACT 357
|||||||||||||||||||||| |||||||||||||| | |||| ||| | |||||||||
Sbjct 327 AACAAGCTCACACCGGAATAAATTACGCTTCTGGTGGTGCCGGACTTC-TCGAAGAAACT 385
Query 358 AGCCAACATTTGGGTGGAAGAATCAGTTTT-AAAAGGCAAATAAAGAATCACCGGTCGAT 416
||||||||||| |||| ||||||||||||| |||| |||||||| ||||||||| |||
Sbjct 386 AGCCAACATTTAGGTGAAAGAATCAGTTTTGAAAA-GCAAATAACTAATCACCGGAAGAT 444
Query 417 GATTATGACGGCTAAAGTTCCAGAGGAGAAGCTGAATAAATGTCTATACACAATTAATAT 476
|||||||||||| ||||||| ||||||||| || || |||||||| |||||||||||
Sbjct 445 GATTATGACGGCGGGAGTTCCACCGGAGAAGCTTAAGAAGTGTCTATATACAATTAATAT 504
Query 477 TGGAAGCAATGATTATCTCAACAACTATTTCATGCCGGCTCCATACA-TGACCAAT-AAG 534
|||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||
Sbjct 505 TGGAAGCAATGATTATCTCAACAACTATTTCATGCCGGCTCCCTACACT-ACCAATGAA- 562
Query 535 AAGTTCAGTTTCGATGAATATGCTGATTCTCTCATTCGAAGTTATCGCTCTCATTTGAAG 594
|| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||
Sbjct 563 AATTTCAGTTTCGATGAATATGCTGATTTTCTCATTCAAAGTTATCGCTCTTATTTGAAG 622
Query 595 TCATTGTATGTTCT-AGGAGCAAGAAAGGTTGCTGTGTTTGGGGTGAGTAAGCTCGGATG 653
|||||||| || || ||||||||| ||||| || || ||||||||||||||||| || ||
Sbjct 623 TCATTGTACGT-CTTAGGAGCAAGGAAGGTAGCGGTCTTTGGGGTGAGTAAGCTTGGGTG 681
Query 654 CACGCCGCGTATGATTGCCTCCCATGGTGGCGGTAATGGCTGTGCTGCCGAAGTAAACAA 713
||||||||| ||||| |||||||||||||| ||||| ||||| ||| | ||||| |||||
Sbjct 682 CACGCCGCGGATGATCGCCTCCCATGGTGGAGGTAAAGGCTGCGCTACTGAAGTGAACAA 741
Query 714 AGCGGTAGAACCTTTCAACAAGAACCTCAAAGCTCTTGTCTATGAATTCAACCGAAAC-- 771
||| || ||||||||||||||||| || |||| ||| ||| |||||||||| ||| |
Sbjct 742 AGCTGTCGAACCTTTCAACAAGAAACTTAAAGATCTCATCTCTGAATTCAACAGAATCAG 801
Query 772 T-TTGCTGAT---GCTAAGTTCACCTTCGTTGATATCTTT-AGCGGCCAAACTCCT-TTC 825
| ||| |||| |||||||||||||| |||||| | ||| ||| |||||| |||| ||
Sbjct 802 TGTTGTTGATCATGCTAAGTTCACCTTTGTTGATCT-TTTCAGCAGCCAAAATCCTATT- 859
Query 826 GCGTTTTTCATGTTAGGGTTTAGGGTAACAAACAAAAGCTGTTGTACGGTAAAACCAGGG 885
| || |||||| ||||| |||| ||||||| ||||||| |||||||||||| || |||||
Sbjct 860 GAGTATTTCATTTTAGGATTTACGGTAACAGACAAAAGTTGTTGTACGGTAGAATCAGGG 919
Query 886 GAAGAACTTTGTGC-GACAAATGAACCGGTTTGTCC-AGCTCGAAGAT-GGTACGTGTAC 942
||||||||||||| | ||||| ||||||||||||| | |||| || ||||||| |||
Sbjct 920 CAAGAACTTTGTGCCG-CAAATAAACCGGTTTGTCCGAA-TCGA-GAACGGTACGTCTAC 976
Query 943 TGGGACAACGTCCACAGCACAGAAGCAGCCAATATGGTCGTTGCAAAGGCTGCGTTTACC 1002
|||||||| ||||| |||||||||||||| |||| |||||||| ||||||||||||| ||
Sbjct 977 TGGGACAATGTCCATAGCACAGAAGCAGCTAATAAGGTCGTTGTAAAGGCTGCGTTTGCC 1036
Query 1003 GGACTCATTACGTCTCCT 1020
||||||||||||||||||
Sbjct 1037 GGACTCATTACGTCTCCT 1054
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51490000675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5