BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480863
Length=1672
Score E
Sequences producing significant alignments: (Bits) Value
AT2G20360.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 2604 0.0
> AT2G20360.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:8785988-8789473 FORWARD LENGTH=1666
Length=1666
Score = 2604 bits (1410), Expect = 0.0
Identities = 1591/1676 (95%), Gaps = 21/1676 (1%)
Strand=Plus/Plus
Query 1 CCATttctctcttcttcatcttctccccttctctctctcatctgtatttgttgtctctcC 60
||||||||||| ||||| || ||| | |||||||| ||||||||||||||| | |
Sbjct 5 CCATTTCTCTCCTCTTCTTCCTCT-TTC-TCTCTCTCACATCTGTATTTGTTG----T-C 57
Query 61 ATCGATCGTGTAACTGAGAACGAAAGATGCAAGCAGTTTCCAGGAGATTAGTTCAACGGC 120
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 58 -TCGATCGTGTAACTGAGAACGAAGGATGCAAGTAGTTTCCAGGAGATTAGTTCAACGGC 116
Query 121 CTCTCGCCGGAGAAGCTTCGATCTACTCATCTTCTTCTCTCAGATCGCTCTACGGAGTCT 180
|||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 117 CTCTCGTCGGAGGAGCTTCGATCTATTCATCTTCTTCTCTCAGATCGCTCTACGGAGTCT 176
Query 181 CTAATCACCTGAATGGGACTGATAATCGTCGCTACTCGTCTTCCCTCGCTACTAAAGGCG 240
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||
Sbjct 177 CTAATCACCTGAATGGGACTGATAATTGTCGCTATTCGTCTTCCCTCGCTACTAAGGGCG 236
Query 241 TGGGACACCTCGCTCGCAAGGGTACTGGTGGAAGATCTTCCGTTAGTGGCATTGTAGCTA 300
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 237 TGGGACACCTCGCTCGCAAGGGTACTGGTGGGAGATCTTCCGTAAGTGGCATTGTAGCTA 296
Query 301 CAGTATTTGGAGCCACAGGATTTCTGGGTCGTTATCTTGTGCAGCAGCTAGCTAAAATGG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGTATTTGGAGCCACAGGATTTCTGGGTCGTTATCTTGTGCAGCAGCTAGCTAAAATGG 356
Query 361 GATCACAAGTGCTCGTTCCTTTCCGAGGCTCAGAGGATTCTCCTCGACATCTCAAGTTGA 420
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 357 GATCACAAGTGCTTGTTCCTTTCCGAGGCTCAGAGGACTCTCCTCGACATCTCAAGTTGA 416
Query 421 TGGGAGATTTAGGACAGGTAGTTCCAATGAAATTTGATCCAAGAGATGAAGACTCGATTA 480
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 417 TGGGAGATTTAGGACAGGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTA 476
Query 481 AGGCTGTCATGGCCAAGGCTAATGTCGTTATCAATCTTATTGGAAGAGAGTACGAGACCA 540
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 477 AGGCTGTCATGGCCAAGGCTAATGTCGTTATCAATCTAATTGGAAGAGAGTACGAGACAA 536
Query 541 GAAATTTCAGTTTTGAAGATGCGAATCATCATATCGCTGAGAAACTTGCATTGGTGGCCA 600
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 537 GAAATTTCAGTTTTGAAGATGCGAATCATCATATTGCTGAGAAACTTGCATTGGTGGCCA 596
Query 601 AGGAACACGGTGGGATAATGAGATACATTCAAGTTTCTTGCCTAGGAGCTTCAGCGTCAT 660
||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||
Sbjct 597 AGGAACACGGTGGGATAATGAGATATATTCAAGTTTCTTGCCTAGGAGCTTCTGTGTCAT 656
Query 661 CTCCTTCAAGAATGCTGAGGGCAAAGGCTGCTGCTGAGGAAGCTGTCTTGAACGCGCTGC 720
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 657 CTCCTTCAAGAATGCTGAGGGCAAAAGCTGCTGCTGAGGAAGCTGTCTTGAACGCACTGC 716
Query 721 CTGAGGCCACCGTCATGAGACCTGCAACCATGATTGGTACAGAAGACAGAATCTTGAATC 780
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 717 CTGAGGCAACCATCATGAGACCTGCAACCATGATTGGTACAGAAGACAGAATCTTGAACC 776
Query 781 CCTGGTCAATGTTCGTTAAAAAATATGGTTTCCTGCCGCTCATAGGGGGTGGAACCACCA 840
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 777 CCTGGTCAATGTTCGTTAAAAAATATGGTTTCCTCCCGCTCATAGGTGGTGGAACCACCA 836
Query 841 AATTCCAGCCTGTTTATGTGGTTGATGTTGCTGCTGCAATCGTTGCAGCTCTAAAGGACG 900
||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |
Sbjct 837 AATTCCAGCCTGTTTATGTGGTTGATGTTGCTGCTGCGATTGTTGCTGCTCTAAAGGATG 896
Query 901 ATGGCTCCAGCATGGGGAAAACATATGAATTGGGTGGTCCAGATGTCTTTACCACTCATG 960
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 897 ATGGCTCCAGCATGGGGAAAACATACGAATTGGGTGGTCCAGATGTCTTTACCACTCACG 956
Query 961 AGTTGGCTGAGATCATGTATGATATGATTCGTGAATGGCCTCGGTATGTGAAGCTTCCAT 1020
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 957 AGTTGGCAGAGATCATGTATGATATGATTCGTGAATGGCCTCGGTATGTGAAGCTTCCGT 1016
Query 1021 TTCCAATTGCCAAGGCAATGGCGGCTCCTCGAGACTTCATGGTGAACAAAGTCCCATTCC 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1017 TTCCAATTGCCAAGGCAATGGCGGCTCCTCGAGACTTCATGGTGAACAAAGTCCCGTTCC 1076
Query 1081 CCTTACCCTCTCCTCAGATCTTCAATCTGGATCAAATCAATGCACTGACAACCGATACAC 1140
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1077 CCTTACCCTCTCCTCAGATCTTCAACCTGGATCAAATCAATGCACTTACAACCGATACAC 1136
Query 1141 TTGTATCTGACAAGGCCTTGAAGTTTCAGGATTTGGACCTTGTCCCCCATAAATTGAAGG 1200
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1137 TTGTATCTGACAACGCCTTGAAGTTTCAGGATCTGGACCTTGTCCCCCATAAATTGAAGG 1196
Query 1201 GATATCCGGTCGAGTTTCTTATCCAATATCGCAAGGGTGGTCCTAACTTCGGTTCTACTG 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GATATCCGGTCGAGTTTCTTATCCAATATCGCAAGGGTGGTCCTAACTTCGGTTCTACTG 1256
Query 1261 TCAGCGAAAAGATACCAACAGACTTCTACCCTTGATGCTGCTTCTCTGCTCAAAGGTCAT 1320
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 TCAGTGAAAAGATACCAACAGACTTCTACCCTTGATGCTGCTTCTCTGCTCAAAGGTCAT 1316
Query 1321 TTCCTGGACTAATTTTTTCATGCAAGTGTCACAATGAGATTGCGGAAACCAGATTTGCTA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 TTCCTGGACTAATTTTTTCATGCAAGTGTCACAATGAGATTGCGGAAACCAGATTTGCTA 1376
Query 1381 TGTTGATGCCTTTCATTTACTTCTGTCAATAATAAACGGGTCCTCCTCTTTGTTGTGTTC 1440
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TGTTGATGACTTTCATTTACTTCTGTCAATAATAAACGGGTCCTCCTCTTTGTTGTGTTC 1436
Query 1441 TGGaaaaaaaTTATAACACTTCAACATCATTATAAGTTAGAGAGGGGACAATATCTTTCT 1500
| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 1437 TTGAAAAAA-TTATAACACATCAACATCATTATAAGTTAGAGAGGGGACAATATATTTCT 1495
Query 1501 TGATGGGGCGATTTGGTCCCTTAGGGGTTATGCAGTGTCTGGTT--T--CGACCTCCATG 1556
||||| || || ||||||||||| ||||||| ||||||||| | ||| |||||||
Sbjct 1496 TGATGTGG---TT-GGTCCCTTAGGATTTATGCAATGTCTGGTTCGTTTCGAACTCCATG 1551
Query 1557 TACTACTTTTCTCTTGAGTTAAACTAAAGCCATATGCTTTCATATCTTTGCATTCCATAT 1616
|||||||| | ||||||| ||||||||||||||||||||||| ||||||||| |||||
Sbjct 1552 TACTACTTC-C-CTTGAGTAAAACTAAAGCCATATGCTTTCAT--CTTTGCATTACATAT 1607
Query 1617 AGCTTGGTGTTGTATGTTTCACTAACGACAAAACGTTTCAACATGAATCTGTATGC 1672
|||| |||||||||||||| ||| |||||||||||| |||||||| ||||||||||
Sbjct 1608 AGCTCGGTGTTGTATGTTTTACTTACGACAAAACGTATCAACATGCATCTGTATGC 1663
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82630097070
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5