BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480877 Length=902 Score E Sequences producing significant alignments: (Bits) Value AT2G20495.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Serine-th... 1264 0.0 > AT2G20495.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 155 Blast hits to 154 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 5; Plants - 34; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr2:8833165-8835263 FORWARD LENGTH=1093 Length=1093 Score = 1264 bits (684), Expect = 0.0 Identities = 849/924 (92%), Gaps = 29/924 (3%) Strand=Plus/Plus Query 1 aaagaaaaaaaaaatgaagaaaagaaaaaaTCCGGAATCGTCCGCCTCTAAAGCAAAGAA 60 ||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct 3 AAAGAAAAACAAAATGAAGAAAAGAACAAATCCGGAATCGTCCACCTCTGAAGCAAAGAA 62 Query 61 ACGCCGGCGAGAGGAAGAAGATGAAGA-AGAAGTGGGTTGTAGTCACACTGCAA-T---- 114 |||||||||||| | |||||||| || | |||| |||||||||||| |||||| | Sbjct 63 ACGCCGGCGAGA-G--GAAGATGACGATA-AAGTTGGTTGTAGTCACTCTGCAATTGAAG 118 Query 115 -T------G-A----A-GATCAATGTCTTCCTCTGGAGGATGATCTCACCTTTAGCGACA 161 | | | | ||||||||||||||||| ||||||||||||||||||||||| | Sbjct 119 ATGGAGCAGTATCTGAGGATCAATGTCTTCCTCTTGAGGATGATCTCACCTTTAGCGATA 178 Query 162 CTTCTG-TGGCATTACGAATGATGAGAGCTCAGTTTCCTCGTATTGATCAGGCTTCGATC 220 |||||| || | || ||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 179 CTTCTGTTGCCCTT-CGAATGATGCGAGCTCAGTTTCCTCGTATTGACCAGGCTTCGATC 237 Query 221 CCACCCTTCATATTACAGTCGCAGTTATACAGTAGCGTCAATGATAGAACCCAAGTCGAT 280 ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct 238 CCACCCTTCATATTACAGTCGCAATTGTACAGTAGTGTCAATGATAGAACCCAAGTCGAT 297 Query 281 AGAGAATTAGAGTGTTTAAGAAGGGAGAAAGTTGTTCGTGTTTTCAAACTCAACACTGGA 340 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 298 AGAGAATTAGAGTGTTTACGAAGGGAGAAAGTTGTTCGTGTTTTCAAACTCAACACTGGA 357 Query 341 CAAGATGATCATGCAATTATCTTTTTGGATGACTATCTTAACCAGGTAGATCGAATAGTG 400 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 358 CAAGATGATCATGCCATCATCTTTTTGGATGACTATCTTAACCAGGTAGATCGAATAGTG 417 Query 401 AAGAGGATGGAAGAGAAGAGACAGAGTGATCTTGAAGTTTTTAAGTGGTTCAAAGGGCAT 460 ||||||||||||||||||| |||||||||||||||| |||| |||| ||||||| |||| Sbjct 418 AAGAGGATGGAAGAGAAGAAACAGAGTGATCTTGAAATTTTCAAGTTGTTCAAAATGCAT 477 Query 461 GTCCTTGATTCAAAACTTGAACCCAGTATTGGACATCATGAGCTATTTTCGCTGTTGTCA 520 ||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||| Sbjct 478 GTCCTTGATTCAAAACTTGAACCTAGTATCGGGCATCATGAGCTACTTTCGCTGTTGTCA 537 Query 521 TTGGGCGGAAAGGTGAAAGATGCACACATCACTCTCTTAATTAACGCAGGCCTTCTCACA 580 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 538 TTGGGAGGAAAGGTGAAAGATGCACACATCACTCTCTTAATAAACGCAGGCCTTCTCACA 597 Query 581 CGCCAACTTATCGATCCAGACATGTACTGGTTTGCAATTCCAAGTATCGGTAAACTGTGG 640 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct 598 CGCCAACTTATCGATCCAGACATGTACTGGTTTGCAATTCCGAGTACCGGTAAATTGTGG 657 Query 641 AAGGGTCTATTGCAGGGAAGGAACGAACTCCTCTCATTGTTAAAGCGCAAGCGACATAAA 700 |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 658 AAGGGTCTATCGCAGGGAAGGAACGAACTCCTCTCATTGATAAAGCGCAAGCGACATAAA 717 Query 701 GAGATGTTCTTGGCAGAGCTTGAAAAGAAACGGCTCCGGTTCTCTCCTCTGGATGTGAGA 760 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 GAGATGTTCTTGGCTGAGCTTGAAAAGAAACGGCTCCGGTTCTCTCCTCTGGATGTGAGA 777 Query 761 TTTCACATACGTGATCTCATTGGCTCCGGTCACCTGAAAACTGTTCAGACAACTTCTGGG 820 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 TTTCACGTACGTGATCTCATTGGCTCCGGTCACCTGAAAACTGTTCAGACAACTTCTGGA 837 Query 821 CTGATCGTTCGGATTTCAAAGGACTAAAATGCCAG-TGCGGGTTTCTCATCAAATGGGCA 879 |||||||||||||||| ||||||||||||||| || ||| |||||||||||||| ||| | Sbjct 838 CTGATCGTTCGGATTTTAAAGGACTAAAATGC-AGGTGCAGGTTTCTCATCAAACGGGTA 896 Query 880 ATTTAATTAT-CAGGTGACCTTTT 902 |||| || || || | |||||||| Sbjct 897 ATTTCAT-ATTCAAGAGACCTTTT 919 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44055346919 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5