BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480900
Length=2159
Score E
Sequences producing significant alignments: (Bits) Value
AT2G20650.1 | Symbols: | RING/U-box superfamily protein | chr2... 3384 0.0
AT4G28370.1 | Symbols: | RING/U-box superfamily protein | chr4... 1616 0.0
> AT2G20650.1 | Symbols: | RING/U-box superfamily protein | chr2:8903676-8907339
REVERSE LENGTH=2189
Length=2189
Score = 3384 bits (1832), Expect = 0.0
Identities = 2012/2098 (96%), Gaps = 16/2098 (1%)
Strand=Plus/Plus
Query 1 TTCCAAGTTTCCACCTTTGTTCTCTCCAAACATATATTATACTAATAGACTAGAGAACAA 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1 TTCCAAGTTTCCACCTTTGTTCTCTCCAAACATATATTATACTAATAGATTAGAGAAGAA 60
Query 61 GGCCATAAAGTTTTTAACTTTCTCCCAAAACGAGAGAGAAAGAATCTCAAAGTCAATTGC 120
| |||||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct 61 CTCTATAAAGTTTTTAACTTTCTCCCCAAAC----GAG---GAATCTCAAAGTCAATTGC 113
Query 121 TGTTCTATGATTACAGA--GTTTGTTTCTCTGTCATAATCTCTTCTAGTTGTGGTTTGTT 178
|||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 114 TGTTCTGTGATTCCAGAGTGTTTGTTTCTCTGTCATAATCTCTTCTAGTTGCGGTTTGTT 173
Query 179 GGGCTCTCACTTTCTCTTTTAGCCGATTTGATC-TTCGTTTCTTGT-GTTTGACTTCACT 236
||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct 174 GGGCTCTCACTTTCTCTTTCAGCCGATTTGATCTTTCGTTTCTTGTGGTTTGACTTCACT 233
Query 237 TAAAGCAACCTTTTTTATTGATCTTCTTGTCTCCTTTATGTTCTGATGAATCGGCATTGT 296
| |||||| || ||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 234 TGAAGCAAGCTCTTTTATTGATCTTATTGTCTCCTTTATGTTCTGATGATTCCGCATTGT 293
Query 297 GAAACCAC-ACGAGATTTT-GGGTTGTGATATGAATAATCTGGGGAATTTCGGGGTTTGG 354
|||| ||| | |||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 294 GAAATCACTA-GAGATTTTGGGGTTGTGATATGAATAATCTGGGGAATTTTGGGGTTTGG 352
Query 355 GGATTAGGGTTCTTCTCCTTAGCGATTTGGTTTGCGGTTTTGCAACAAGCTAATGGACTC 414
||||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 353 GGATTCGGGTTCTTCTCCTTATCTATTTGGTTTGCGGTTCTGCAACAAGCTAATGGACTC 412
Query 415 AGACCCATTAGGGAGACTGCTCGATCCTGGGGCGATGAGTGGCTCTTTGGCaaaaaagaa 474
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 413 AGACCCATAAGGGAGACTGCTCGGTCCTGGGGCGATGAGTGGCTCTTTGGCAAAAAAGAA 472
Query 475 aaaaGCGGAGCAGGACCGTTTTCCGCATGGAACATAACAGGAACATATAGAGGCTCATGG 534
||| | ||||||||||||||||| || ||||| ||||||||||||||||||||| |||||
Sbjct 473 AAAGGTGGAGCAGGACCGTTTTCTGCGTGGAATATAACAGGAACATATAGAGGCACATGG 532
Query 535 AACTTTCTAGATACTGTAAATAGCTCTTCAAAGTTCCCAGATTTCAGAAAAGAAAGTGGT 594
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 533 AAGTTTCTAGATACTGTAAATAGCTCTTCAAAGTTTCCAGATTTCAGAAAAGAAAGTGGT 592
Query 595 AACTCTGTCATTGAGTTAGTGACAAGTCCAACAAAAATAACTGGTGTGCATTATGTTCAG 654
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 593 AACTCTGTCATTGAGTTAGTGACAAGTCCAACAAAAATTACTGGTGTGCATTATGTTCAG 652
Query 655 GGTGCAGTTGTTTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATT 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 GGTGCAGTTGTTTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATT 712
Query 715 AAAGTTGAAGGTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGTGGA 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 713 AAAGTTGAAGGTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGCGGA 772
Query 775 AAGAAGGGTGATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTC 834
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 AAGAAGAGTGATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTC 832
Query 835 GGAATTTTTTCCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAA 894
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 GGTATTTTTTCCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAA 892
Query 895 ACTTCTCCAATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCAGCCCAAATATCC 954
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 893 ACTTCTCCAATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCTGCCCAAATATCC 952
Query 955 CAAAGCGCTTCTAGTGAAAACAATGGGGACAAAGATCGTTATCATATCGAAGGATTGATG 1014
|||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 953 CAAAGCACTTCTAGTGAAAACAATGGGGACAAAGATCGTTATCAAATTGAAGGATTGATG 1012
Query 1015 GAAAGTCCTGCAGTAGATGATGACGGAGATTGTTTTTCGCCATTGTCGCTGAATGCAACC 1074
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1013 GAAAGTCCTGCAGTAGATGATGAAGTAGATTGTTTTTCGCCATTGTCGCTGAATGCAACC 1072
Query 1075 TCCATAAACGTTGAAGTCTACTATAACAAAGCTGTGAACTATACATTGATGGTCACTTTT 1134
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1073 TCCATAAACGTCGAAGTCTACTATAACAAGGCTGTGAACTATACATTGATGGTCACTTTT 1132
Query 1135 GTCTCGTTCCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCC 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 GTCTCGTTCCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCC 1192
Query 1195 GGTGCTGCAAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTA 1254
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 GGTGCCGCAAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTA 1252
Query 1255 TGCCTTTTACATCTCACAGCTGGGATTTTAGTTGAATCCCTTTTTAACGCTTTTGCAACA 1314
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1253 TGCCTTTTACATCTCACAGCTGGGATTTTAGTTGAATCCCTGTTTAACGCTTTTGCAACA 1312
Query 1315 GCTGCGTTCTTCAAATTTGTCGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATA 1374
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1313 GCTGCGTTCTTCAAATTTGTAGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATA 1372
Query 1375 TGGAAAGCAACCCGGCCTTCAACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTC 1434
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 TGGAAAGCGACCAGGCCTTCAACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTC 1432
Query 1435 TCCTTTCTGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATTGAT-AATGTACGA 1493
|||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1433 TCCTTTTTGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATT-ATTAATGTACGA 1491
Query 1494 GTTCCACAACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGAT 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 GTTCCACAACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGAT 1551
Query 1554 AGTTGCAAACGTTGTTCGTGATTCTCGAAAGCCTCTGCATCCTTATTATATCCTGGGGAT 1613
||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||
Sbjct 1552 AGTTGCAAACGTTGTTCGTGATTCTCGAAAGCCTCTGCACCCATATTATATACTAGGGAT 1611
Query 1614 GACTGTTACACGACTTGCTATACCATTGTATGTTTTTGGTTGCCCGAAGAACTTCATGCG 1673
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1612 GACTGTTACACGACTTGCTATACCGTTGTATGTTTTTGGTTGCCCGAAGAACTTCATGCG 1671
Query 1674 TGTAGAGCCCAGCAAGGCCTGGTGTGTAAGCCTGTGCGCATTCATGGGGTTTCAAGCTGC 1733
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1672 TGTAGAGCCCAGCAAGGCCTGGTGTGTAAGCCTGTGTGCATTCATGGGGTTTCAAGCTGG 1731
Query 1734 TGTTCTTCTACTTCAGCATTATTTCGGGTCTCGTTGCTTTGTCCCTCGGAAGATGCTCCC 1793
||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||
Sbjct 1732 TGTTCTTCTTCTTCAGCATTATTTCGGGTCTCGTTGCTTTGTCCCTCGAAAGTTGCTACC 1791
Query 1794 TGAGAAATACAGCTACTACAGAAGATTGGATCATAATGTAAACCGAAGCAGGGACTGCGT 1853
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1792 TGAGAAATACAGCTACTACAGAAGACTCGATCATAATGTAAACCGAAGCAGGGACTGCGT 1851
Query 1854 AATCTGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAACGCCGTG 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1852 AATCTGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAACGCCGTG 1911
Query 1914 TGAGCATATATTCCACTCGGGTTGCTTACAGAGATGGATGGATATAAAGATGGAGTGCCC 1973
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1912 TGAGCATATATTCCACTCGGGATGCTTACAGAGATGGATGGATATAAAGATGGAGTGCCC 1971
Query 1974 AACATGTCGTCGCCCACTTCCTCCAGCTTAAGCTTTGGTTCCCTCGGAATCGTCTATTAA 2033
||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||
Sbjct 1972 AACATGTCGTCGCCCACTTCCTCCAGCTTAACCTTTGGTTCCTTAGGAATCGTCTATTAA 2031
Query 2034 CTGCACCCACATTTAATTGGCTTGGAAAGATATTAGATGAAAACAGAGCATAGATAGA 2091
|||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2032 CTGCACTCACATTTTATTGTCTTGGAAAGATATTAGATGAAAACAGAGCATAGATAGA 2089
> AT4G28370.1 | Symbols: | RING/U-box superfamily protein | chr4:14034654-14041322
FORWARD LENGTH=3919
Length=3919
Score = 1616 bits (875), Expect = 0.0
Identities = 1393/1644 (85%), Gaps = 32/1644 (2%)
Strand=Plus/Plus
Query 373 TTAGCGATTTGGTTTGCGGTTTTGCAACAAGCTAAT-GGACTCAGACCCATTAGGGAGAC 431
||| |||||||||| ||| ||| ||||||||| | ||| | ||||| ||||||||||
Sbjct 420 TTATCGATTTGGTTGGCGATTTCGCAACAAGC-GCTGGGATTGAGACCTATTAGGGAGAA 478
Query 432 TGCTCGATCCTGGGGCGATGAGTGGCTCTTTGGCaaaaaagaaaaaaGC-GGAGCAGGAC 490
||||||| ||| | || |||||||||||||| | ||| || |||| | || ||||
Sbjct 479 ACCTCGATCATGGAGTGACGAGTGGCTCTTTGGTAGGAAA-CAAGAAGCTGAAGTTGGAC 537
Query 491 CGTTTTCCGCATGGAACATAACAGGAACATATAGAGGCTCATGGAACTTTCTAG-A-TAC 548
| ||||| || ||||| ||||||||||| |||||||| | ||||| ||||| | | | |
Sbjct 538 CCTTTTCTGCTTGGAATATAACAGGAACTTATAGAGGAACTTGGAAGTTTCT-GAATTCC 596
Query 549 TGTAAATAGCTCTTCAAAGTTCCCAGA-TTTCAGAAAAGAAAGTGGTAACTCTGTCATTG 607
| ||||||||||||| ||||| | ||| ||||| |||||||| |||||| ||||| |||
Sbjct 597 T-TAAATAGCTCTTCGAAGTTTCAAGACTTTCA-AAAAGAAAATGGTAATTCTGTGGTTG 654
Query 608 AGTTAGTGA-CAAG-TCCAACAAAAATAACTGGTGTGCATTATGTTCAGGGTGCAGTTGT 665
||||||| | | || |||||| || |||||||||||||||||||||||||||| ||||||
Sbjct 655 AGTTAGT-AGC-AGTTCCAACGAAGATAACTGGTGTGCATTATGTTCAGGGTGTAGTTGT 712
Query 666 TTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATTAAAGT-T-GAA 723
||||||||||||||||||||||||||| ||||||||||||||||||| |||| | | |||
Sbjct 713 TTTCCATGACGTATTTGACAATGAACAAAATGTGGGTGGTGCCCAAA-TAAA-TCTGGAA 770
Query 724 GGTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGTGGAAAGAAGGGT 783
||||||||||| |||||||||||||| ||||| ||||| |||||||| || ||| || ||
Sbjct 771 GGTGTATATATATGGCCCTTTAGACAACTCCGCCTTGTGGCTAACAGCGGCAAGGAGAGT 830
Query 784 GATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTCGGAATTTTT 843
|||||||| | ||||||| || |||||||||| || |||||||||||||| ||||||||
Sbjct 831 GATTCAGGGCAAGAAGACAATAATCTTCTCTCAAATCCCTATCATCTGCTTGGAATTTTC 890
Query 844 TCCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAAAC-TTCTCC 902
||||| ||||| |||||||||||||||||||||||| || |||||| | |||| ||||||
Sbjct 891 TCCTCTCAAGTGTTTCAAGAATCTCCAAGAGACAGATTACTGAAAC-GGAAACTTTCTCC 949
Query 903 AATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCAGCCCAAATATCCCAAAG-CG 961
| || ||||||||||||||||||| ||||||||||||||||| ||| |||||| | |
Sbjct 950 AGTAAATGAGATGGAGAAGCACTGTAATATCGAAATAGCAGCTCAAGTATCCC-GTGTGG 1008
Query 962 CTTCTAGTGAAAACAATGGGGACAAAGATCGTTATCATATCGAAGGATTGATGGAAAGTC 1021
||||||||||||| ||||| |||||| || |||||| || |||||||||||||||||||
Sbjct 1009 CTTCTAGTGAAAATAATGGAGACAAAAATTATTATCACATGGAAGGATTGATGGAAAGTC 1068
Query 1022 CTGCAGTAGATGATGACGGAGATTGTTTTTCGCCATTGTCGCTGAATGCAACCTCCATAA 1081
||| |||| |||||||||||||||||||| || |||| ||||| ||||| || |||
Sbjct 1069 CTGGGGTAGGCGATGACGGAGATTGTTTTTCCCCTTTGTTACTGAACGCAACTTCTGTAA 1128
Query 1082 ACGTTGAAGTCTACTATAACAAAGCTGTGAACTATACATTGATGGTCACTTTTGTCTCGT 1141
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 1129 ATGTTGAAGTCTACTATAACAAAGCTGTGAACTATACACTGATGGTCACTTTTGTCTCTT 1188
Query 1142 TCCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCCGGTGCTG 1201
|||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1189 TCCTCCAGGTTCTTCTGTTGATCCGGCAAATGGAGCACGGTAACACACAATCTGGTGCTG 1248
Query 1202 CAAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTATGCCTTT 1261
| ||||| || || |||||||| ||||||||||| ||||||||| ||||||| ||||| |
Sbjct 1249 CTAAGGTATCCATTGTAATGATTGGGCAACAAGCGATCATGGATGCTTATTTGTGCCTCT 1308
Query 1262 TACATCTCACAGCTGGGATTTTAGTTGAATCCCTTTTTAACGCTTTTGCAACAGCTGCGT 1321
||||||| ||||| || || ||||| ||||| || ||||| || |||||||| |||||||
Sbjct 1309 TACATCTAACAGCCGGTATATTAGTCGAATCTCTATTTAATGCATTTGCAACCGCTGCGT 1368
Query 1322 TCTTCAAATTTGTCGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATATGGAAAG 1381
||||||| || || || |||||||| ||||||||||||||||||||| | ||||||||||
Sbjct 1369 TCTTCAAGTTCGTAGTCTTTTCGATTTTTGAGATGAGATATCTTCTGGCTATATGGAAAG 1428
Query 1382 CAACCCGGCCTTC-AACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTCTCCTTT 1440
||||||| ||||| || ||||| ||||| ||||||||||||||| | || || ||||||
Sbjct 1429 CAACCCGTCCTTCCAAT-AGCGGAGAGGGTTGGGAAACAATGAGGAGAGAACTGTCCTTT 1487
Query 1441 CTGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATTGATAATGTACGAGTTCCAC 1500
|||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||
Sbjct 1488 CTGTACAGTCGTTTCTATGGGATCCTTCTTGGAGGCATTTTGATAATGTACCAGTTCCAC 1547
Query 1501 AACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGATAGTTGCA 1560
|||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| ||
Sbjct 1548 AACTACATGCAGCCGATTCTCCTTCTCATGTACTCATTTTGGATACCACAAATAGTCGCC 1607
Query 1561 AACGTTGTTCGTGATTCTCGAAAGCCTCTGCATCCTTATTATATCCTGGGGATGACTGTT 1620
|| ||||| || ||||| ||||||||||||| || ||||| ||| |||| ||||| | |
Sbjct 1608 AATGTTGTCCGGGATTCAAGAAAGCCTCTGCACCCATATTACATCTTGGGCATGACAGCT 1667
Query 1621 ACACGACTT-GCTATACCATTGTATGTTTTTGGTTGCCCGA-AGAACTTCATGCGTGTAG 1678
||||| || |||||||| || ||||||||||| ||||| | | ||||||||||||||||
Sbjct 1668 ACACGG-TTAGCTATACCGTTATATGTTTTTGGATGCCC-ACACAACTTCATGCGTGTAG 1725
Query 1679 AGCCCAGCAAGGCCTGGTGTGTAAGCCTGTGCGCATTCATGGGGTTTCAAGCTG-CTGTT 1737
|||||| ||||| |||||| || || ||||| ||||||||||||| ||||| | | ||
Sbjct 1726 AGCCCAACAAGGTTTGGTGTATATGCTTGTGCACATTCATGGGGTTGCAAGCCGTCA-TT 1784
Query 1738 CTTCTACTTCAGCATTATTTCGGGTCTCGTTGCTTTGT-CCCTCGGAAGATGCTCCCTGA 1796
||||| |||||||||||||| || || || |||||||| ||| || ||||||| || ||
Sbjct 1785 CTTCTTCTTCAGCATTATTTTGGTTCACGCTGCTTTGTTCCC-CGTCAGATGCTACCAGA 1843
Query 1797 GAAATACAGCTACTACAGAAGATTGGATCATAATGTAAACCGAAGCAGGGACTGCGTAAT 1856
|||||||| |||| || ||||||| ||| |||||| ||| | || || || || ||
Sbjct 1844 GAAATACAACTACCACCGAAGATTTAATCGGGATGTAAGCCGCACCACTGATTGTGTTAT 1903
Query 1857 CTGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAACGCCGTGTGA 1916
|||||||||| | |||||||||||||| | || | ||||||||||||||| || |||||
Sbjct 1904 CTGCATGACCGCTATTGATCTCAGACAGCATACCAGTGATTGCATGGTAACTCCATGTGA 1963
Query 1917 GCATATATTCCACTCGGGTTGCTTACAGAGATGGATGGATATAAAGATGGAGTGCCCAAC 1976
||| | || |||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1964 ACATTTCTTTCACTCGGGATGCTTACAGAGATGGATGGATATAAAAATGGAGTGTCCAAC 2023
Query 1977 ATGTCGTCGCCCACTTCCTCCAGC 2000
||||| || | |||||||||||
Sbjct 2024 TTGTCGGCGGTCTCTTCCTCCAGC 2047
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107077762485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5