BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480902
Length=1599
Score E
Sequences producing significant alignments: (Bits) Value
AT2G20680.1 | Symbols: MAN2, AtMAN2 | Glycosyl hydrolase superf... 2366 0.0
AT4G28320.1 | Symbols: MAN5, AtMAN5 | Glycosyl hydrolase superf... 1157 0.0
> AT2G20680.1 | Symbols: MAN2, AtMAN2 | Glycosyl hydrolase superfamily
protein | chr2:8920467-8923173 FORWARD LENGTH=1966
Length=1966
Score = 2366 bits (1281), Expect = 0.0
Identities = 1452/1533 (95%), Gaps = 18/1533 (1%)
Strand=Plus/Plus
Query 81 TTTTCTGAGATTTTCTTCACATTC-TCCGAAACGTGGACACATTTTGATCTTTT---TG- 135
||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 333 TTTTCTGAGATTTTCTTCACA-TCGTCCGAAACGTGGACACATTTTGATCTTTTGGGTGT 391
Query 136 ---GGTGTCAATAAAAGTTGAAACTTTGATTGCATTTTCTCTCAAAAGG-TGCAATTTTT 191
||||||||||| ||||||||||||||| || |||||||||||||| | |||||||
Sbjct 392 CACTGTGTCAATAAAGGTTGAAACTTTGATTACA-TTTCTCTCAAAAGGAT-TAATTTTT 449
Query 192 ATTAC-CCATCTAGGTGAGGTTTGGATAAATTGGTGAGGAATCCGAAGAAACTGGCGAGA 250
||| | | |||| |||||| ||||||| ||||||||||||||| ||||||||||||||||
Sbjct 450 ATTTCTCTATCTGGGTGAGATTTGGATTAATTGGTGAGGAATCGGAAGAAACTGGCGAGA 509
Query 251 TTACTAGCGATTCTGAAATATCAGAAGCTATTAAGAGGAACAAGAGGCAT---GGCTCCT 307
|||| ||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||||
Sbjct 510 TTACAAGCGATTGTGAAATATCAGAATCTAATAAGAGGAAGAAGAGGCATGGCGGCTCCT 569
Query 308 ACAGGGAACGGGCCAGTGATACCAATCCTAGGTTTTCTTACATGTGTGGCTTTTATCTAT 367
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 570 ACAGGGAACGGGCCAGTGATACCAATTCTAGGTTTCCTTACATGTGTGGCTTTTATCTAT 629
Query 368 CTCTCGTTTGGTGATTTGTGGTTCGATTTCAAAAGGGAGGGCGAGTTAGGGTTCGTGAAA 427
||||| ||||| ||||||||||||| | |||||| |||||||||||||| |||||||||
Sbjct 630 CTCTCCTTTGGAGATTTGTGGTTCGGTCTCAAAACGGAGGGCGAGTTAGCATTCGTGAAA 689
Query 428 CGGAACGGGACACAGTTTGTGGTCGATGGTAAGGCTCTGTATGTGAATGGTTGGAACTCT 487
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 CGGAATGGGACACAGTTTGTGGTCGATGGTAAGGCTCTGTATGTGAATGGTTGGAACTCT 749
Query 488 TATTGGTTCATGGACCATGCTGTGAATGATCATAGCAGACACCGTGTCGGTGCTATGCTT 547
||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||
Sbjct 750 TATTGGTTCATGGACCATGCTGTGAATGATCATAGTAGACATCGCGTTAGTGCTATGCTT 809
Query 548 GAAGCTGGAGCTAAAATGGGTCTCACTGTTTGTAGAACATGGGCTTTTAATGATGGAGGC 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 GAAGCTGGAGCTAAAATGGGTCTCACTGTTTGTAGAACATGGGCTTTTAATGATGGAGGC 869
Query 608 TACAATGCTCTTCAGATCTCTCCTGGTAGATTCGATGAACGAGTCTTCAAGGCTTTGGAT 667
|||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct 870 TACAATGCTCTTCAGATCTCTCCTGGTAGATTCGATGAACGAGTTTTCAAGGCCTTAGAT 929
Query 668 CATGTAATCGCAGAGGCAAAAACACATGGTGTTAGGTTGCTTCTGAGCTTAGTGAATAAC 727
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 930 CATGTAATCGCAGAGGCCAAAACACATGGTGTTAGGTTGCTTCTGAGCTTAGTGAATAAC 989
Query 728 TTACAAGCTTATGGAGGGAAGACTCAGTACGTCAATTGGGCATGGCAGGAAGGTGTAGGC 787
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 990 TTACAAGCTTATGGAGGGAAAACTCAGTACGTCAATTGGGCATGGCAGGAAGGTGTAGGC 1049
Query 788 CTCAGCTCGTCCAATGATTCCTTCTTCTTTGACCCATCTATCCGCAGATACTTCAAGAAT 847
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050 CTCAGCTCATCCAATGATTCCTTCTTCTTTGACCCATCTATCCGCAGATACTTCAAGAAT 1109
Query 848 TATCTGACGGTGCTGCTGACCCGCAAAAACTCTTTAACCGGGATTGAGTACAGAAACGAC 907
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1110 TATCTCACGGTGCTGCTGACCCGTAAAAACTCTTTAACCGGGATTGAGTACAGAAACGAC 1169
Query 908 CCAACAATTTTTGCATGGGAATTGATAAACGAGCCTCGCTGCATGTCTGATGTCTCTGGG 967
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1170 CCAACAATTTTTGCATGGGAGTTGATAAACGAGCCTCGCTGCATGTCTGATGTCTCTGGG 1229
Query 968 GATACTCTACAAGACTGGATTAACGAAATGACAGCGTTCATTAAATCAATTGACAACAAG 1027
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1230 GATACTCTACAAGACTGGATTAACGAAATGACAGCATTCATTAAATCAATTGACAACAAG 1289
Query 1028 CATCTTCTAACCGTAGGCTTGGAAGGGTTCTACGGTCCCAATAACCCTAAACGGCTGACA 1087
||||||||||| || ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 1290 CATCTTCTAACTGTTGGCTTGGAAGGGTTCTACGGTCCCAGTAGCCCAAAAAAGCTGACA 1349
Query 1088 GTTAACCCGGAACGGTGGGCCTCTGAGCTTGGGTCAGATTTTGTTCGAAACTCTGATTCG 1147
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350 GTTAACCCCGAACGGTGGGCCTCTGAGCTTGGGTCAGATTTTGTTCGAAACTCTGATTCG 1409
Query 1148 CCAAACATCGATTTTGCATCAGTTCATATCTATCCC-GATCACTGGTTTCACGATCAGGG 1206
||||||||||||||||| || ||||||||||| ||| |||||||||||||||||||| ||
Sbjct 1410 CCAAACATCGATTTTGCCTCGGTTCATATCTA-CCCTGATCACTGGTTTCACGATCAAGG 1468
Query 1207 GTTTGAAGAAAAACTCAAGTTTGTGGTGAAATGGATGCTATCTCACATTGAAGATGGGGA 1266
||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 1469 GTTTGAAGAAAAACTCAAGTTCGTTGTAAAATGGATGCTATCTCACATTGAAGATGGGGA 1528
Query 1267 CAAGGAACTGAAGAAGCCTGTTCTGTTCACCGAGTTTGGCCTCTCGAATCTGAACAAAGA 1326
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1529 CAAGGAACTGAAGAAGCCTGTTCTGTTCACCGAGTTTGGACTCTCGAATCTGAACAAGGA 1588
Query 1327 CTATGATCCATCGCAGCGGGATCGGTTCTACAGAACCATCTTTGATGTTATTTACAAATC 1386
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1589 CTACGATCCATCGCAGCGGGATCGGTTCTACAGAACCATCTTTGATGTTATTTACAAATC 1648
Query 1387 AGCCAAGCGGAAGCGGTCTGGTGCAGGCACACTAGTGTGGCAGTTTCTGATAGAAGGCAT 1446
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1649 AGCCAAGAGGAAGCGGTCTGGTGCAGGAACACTAGTGTGGCAGTTTCTGATAGAAGGCAT 1708
Query 1447 GGAAGGTTTCAACGATGACTTTGGAATAGTCCCGTGGGAACAAGATTCCATTCAGAGATT 1506
||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 1709 GGAAGGTTTCAACGATGACTTTGGAATAGTCCCATGGGAGCAAGACTCCATTCAGAGATT 1768
Query 1507 AATGATTGAACAGTCTTGCAGATTGAGTCGAGTCACTGGACGCCATCTTCTTGACAAGAA 1566
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1769 AATGATTGAACAGTCTTGCAGATTGAGTCGAATCACTGGACGCCATCTTCTTGACAAGAA 1828
Query 1567 GTCCATAGAAATGTGTTCCCATAGACCATGAGA 1599
|||||||||||||||||||||||||||||||||
Sbjct 1829 GTCCATAGAAATGTGTTCCCATAGACCATGAGA 1861
> AT4G28320.1 | Symbols: MAN5, AtMAN5 | Glycosyl hydrolase superfamily
protein | chr4:14018183-14020251 REVERSE LENGTH=1685
Length=1685
Score = 1157 bits (626), Expect = 0.0
Identities = 1065/1275 (84%), Gaps = 38/1275 (3%)
Strand=Plus/Plus
Query 293 AGAGGCATGGCTCCTACAGGGAACGGGCCAGTGATACCAATCCTAGGTTTTCTTACATGT 352
||| |||||| ||| ||| ||||| ||||| || ||| ||| ||||||||| ||| ||||
Sbjct 274 AGAAGCATGGTTCCCACAAGGAACAGGCCAATGCTACGAATTCTAGGTTTTTTTATATGT 333
Query 353 GTGGCTTTTATCTATCTCTCGTTTGGTGATTTGTGGTTCGATTTCA-AAAGGGAGGGC-G 410
| ||||| |||||||| || ||| | ||||||||||| || ||| ||||||| ||
Sbjct 334 GCAGCTTTCATCTATCTATCATTTCGAGATTTGTGGTT-GA-ATCACAAAGGGAAAGCAA 391
Query 411 AGTTAGGGTTCGTGAAACGGAACGGGACACAGTTTGTGGTCGATGGTAAGGCTCTGTATG 470
|||||||||| |||||| ||||||| || ||||||||||| |||| |||| |||| ||||
Sbjct 392 AGTTAGGGTTTGTGAAAAGGAACGGAACTCAGTTTGTGGTGGATGATAAGCCTCTTTATG 451
Query 471 TGAATGGTTGGAACTCTTATTGGTTCATGGACCATGCTG-TGAATGATCATAGCAGACAC 529
| ||||| |||||||| |||||||||||||||||||| | || |||| ||||||||| ||
Sbjct 452 TAAATGGGTGGAACTCGTATTGGTTCATGGACCATGCGGTTG-ATGAACATAGCAGAAAC 510
Query 530 CGTGTCGGTGCTATGCTTGAAGCTGGAGCTAAAATGGGTCTCACTGTTTGTAGAACATGG 589
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 511 CTTGTCGGTGAAATGCTTGAAGCTGGAGCTAAAATGGGTCTCACTGTTTGTAGAACTTGG 570
Query 590 GCTTTTAATGATGGAGGCTACAATGCTCTTCAGATCTCTCCTGGTAGATTCGATGAACGA 649
||||| ||||| || ||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 571 GCTTTCAATGACGGTGGCTACAATGCTCTTCAGATCTCTCCTGGCCGATTCGATGAGCGA 630
Query 650 GTCTT-CAAGGCTTTGGATCATGTAATCGCAGAGGCAA-AAACACATGGTGTTAGGTTGC 707
||||| || |||||||||||||||||| ||||| || | ||| |||| |||||| |||
Sbjct 631 GTCTTTCA-GGCTTTGGATCATGTAATTGCAGAAGCGAGAAAG-CATGATGTTAGATTG- 687
Query 708 TT-CTGAGCTTAGTGAATAACTTACAAGCTTATGGAGGGAAGACTCAGTACGTCAATTGG 766
|| || ||||||||||| ||||| |||||||||||||||||||||||||| || || |||
Sbjct 688 TTGCTTAGCTTAGTGAACAACTTGCAAGCTTATGGAGGGAAGACTCAGTATGTGAAATGG 747
Query 767 GCATGGCAGGAAGGTGTAGGCCTCAGCTCGTCCAATGATTCCTTCTTCTTTGACCCATCT 826
|||||||| |||||||| || || || || ||||||||||||||||||||||| ||||||
Sbjct 748 GCATGGCAAGAAGGTGTTGGTCTTAGTTCTTCCAATGATTCCTTCTTCTTTGATCCATCT 807
Query 827 ATCCGCAGAT-ACTTCAAGAATTATCTGACGGTGCTGCTGACCCGCAAAAACTCTTTAAC 885
||||||| || |||||||||||||||| | ||| ||||| ||| | || |||||| ||||
Sbjct 808 ATCCGCA-ATTACTTCAAGAATTATCTCAAGGTTCTGCTCACCAGGAAGAACTCTGTAAC 866
Query 886 CGGGATT-GAGTACAGAAACGACCCAACAATTTTTGCATGGGAATTGATAAACGAGCCTC 944
|||| | |||||||||||||| || || ||||| || ||||| ||||||||||||||||
Sbjct 867 -GGGAATAGAGTACAGAAACGATCCTACGATTTTCGCTTGGGAGTTGATAAACGAGCCTC 925
Query 945 GCTGCATGTCTGATGTCTCTGGGGATACTCTACAAGACTGGATTA-ACGAAATGACAGCG 1003
| |||| | ||||||||||||| | ||||| ||||| ||||| | |||||||||| | |
Sbjct 926 GATGCACGACTGATGTCTCTGGCAAAACTCTCCAAGATTGGAT-AGACGAAATGACGG-G 983
Query 1004 -TTCATTAAATCAATTGACAACAAGCATCTTCTAACCGTAGG-CTTGGAAGGGTTCTACG 1061
|||||||| ||||| || |||||||||| || || ||||| || |||||| ||||| |
Sbjct 984 ATTCATTAAGTCAATCGATGACAAGCATCTCCTCACAGTAGGTCT-GGAAGGCTTCTATG 1042
Query 1062 GTCCCAATAACCCTAAACGGCTGACAGTTAACCCGGAACGGTGGGCCTCTGAGCTTGGGT 1121
|||| |||| ||| ||| |||| |||||||| || |||| |||||| || |||| ||
Sbjct 1043 GTCCTAATAGCCCGAAAGGGCTCACAGTTAATCCAGAACAGTGGGCATCCCAGCTCGGAA 1102
Query 1122 CAGATTTTGTTCGAAACTCTGATTCGC-CAAACATCGATTTTGCATCAGTTCATATCTAT 1180
|||| ||||||| ||||||| | || | ||||||| ||||||||||| |||||||||||
Sbjct 1103 CAGACTTTGTTCAAAACTCTAACTC-CTCAAACATAGATTTTGCATCCGTTCATATCTA- 1160
Query 1181 CCC-GATCACTGGTTTCACGATCAGGGGTTTGAAGAAAAACTCAAGTTTGTGGTGAAATG 1239
||| |||||||||||||| ||||| |||||||| || || |||||||||||||||||
Sbjct 1161 CCCTGATCACTGGTTTCATAATCAGACATTTGAAGAGAAGCTAAAGTTTGTGGTGAAATG 1220
Query 1240 GATGCTATCTCACATTGAAGATGGG--GACAAGGAACTGAAGAAGCCTGTTCTGTTCACC 1297
||||| ||||||||| |||||||| || ||| |||| |||||||| ||||| |||||
Sbjct 1221 GATGCAATCTCACATAGAAGATGGATTGA-AAG-AACTAAAGAAGCCAGTTCTCTTCACA 1278
Query 1298 GAGTTTGGCCTCTCGAATCTGAACAAAGACTATGATCCATCGCAGCGGGATCGGTTCTAC 1357
||||||||||| || || | |||||| ||||| || ||||||||||| ||| |||||||
Sbjct 1279 GAGTTTGGCCTATCAAACCAGAACAAGGACTACGAACCATCGCAGCGAGATAAGTTCTAC 1338
Query 1358 AGAACCATCTTTGATGTTATTTACAAATCAGCCAAGCGGAAGCGGTCTGGTGCAGGCACA 1417
|||| |||||| || || |||||||||||||||| | ||| ||| ||||||||||||
Sbjct 1339 AGAATCATCTTCGACGTGGTTTACAAATCAGCCAAAAGAAAGAAGTCAGGTGCAGGCACA 1398
Query 1418 CTAGTGTGGCAG-T-TTCTGATAGAAGGCATGGAAGGTTTCAACGATGACTTTGGAATAG 1475
||||||||||| | ||| || |||||||||||| ||||||||||||||||| || |
Sbjct 1399 TTAGTGTGGCAGCTATTC--ATGGAAGGCATGGAAACATTCAACGATGACTTTGGGATTG 1456
Query 1476 T-CC-CGTGGGAACAAGATTCCATTCAGAGATTAATGATTGAACAGTCTTGCAGATTGAG 1533
| || | || |||||||||||||| | | ||| ||||| ||||| |||||||||||| |
Sbjct 1457 TTCCACATG--AACAAGATTCCATTTACAAATTGATGATAGAACAATCTTGCAGATTGGG 1514
Query 1534 TCGAGTCACTGGACG 1548
| |||||| |||||
Sbjct 1515 TAAAGTCACAGGACG 1529
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78965457285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5