BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480904 Length=630 Score E Sequences producing significant alignments: (Bits) Value AT2G20700.1 | Symbols: LLG2 | LORELEI-LIKE-GPI ANCHORED PROTEIN... 987 0.0 > AT2G20700.1 | Symbols: LLG2 | LORELEI-LIKE-GPI ANCHORED PROTEIN 2 | chr2:8924894-8925804 REVERSE LENGTH=691 Length=691 Score = 987 bits (534), Expect = 0.0 Identities = 602/634 (95%), Gaps = 8/634 (1%) Strand=Plus/Plus Query 1 aagaaaagagaagagaagagaagaagaaacagagaaaCAATGGAGAtttctccttactgt 60 |||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 52 AAGAGAAGAGAAGAGAAGAGAGGAAGAATCAGAGAAACAATGGAGATTTCTCCTTACTGT 111 Query 61 ctgctttctcttcttcccattttcctcctctctggtttct-ccttctcATATGATGAATT 119 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 112 CTGCTTTCTCTTCTTCCCATTTTCCTCCTCTCTGGTTTCTCCCTT-TCATATGATGAATT 170 Query 120 TGATGGTCACGCAGCCACAAGCAGAGCTCTTCTTCAGACAAGGACAACGTGCAAAGAAGA 179 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 171 TGATGGTCACGCAGCAACAAGCAGAGCTCTTCTTCAGACAAGGACAACCTGCAAAGAAGA 230 Query 180 TTTCGCAAACAAGAACTACACAATCATAACAAGCAGATGTAAAGGACCAAATTATCCGGC 239 ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 231 TTTTGCTAACAAGAACTACACAATCATAACAAGCAGATGCAAAGGACCAAATTATCCGGC 290 Query 240 AAATGTGTGTTGCTCCGCCTTCAAGGACTTTGCTTGCCCTTTTGCAGAAGTTCTTAACGA 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 291 AAATGTGTGTTGCTCCGCCTTCAAGGACTTTGCTTGCCCTTTTGCAGAAGTTCTTAACGA 350 Query 300 CGAAAAGAACGATTGTGCCTCCACAATGTTCAGCTACATCAACCTTTACGGTCGTTATCC 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 351 CGAAAAGAACGATTGTGCCTCCACAATGTTCAGCTACATCAACCTTTACGGTCGTTATCC 410 Query 360 TCCTGGAATCTTTGCCAACATGTGTAAAGAAGGCAAAGAAGGTCTTGACTGCACTAATGT 419 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 411 TCCTGGAATCTTTGCCAACATGTGTAAAGAGGGCAAAGAAGGTCTTGACTGCACTGATGT 470 Query 420 CACCCAGTCCGCATCTGCAACTTCTGATTCTAACCCCCGAGCCTCCGCAACTGCATCTCT 479 ||||||||||||||| |||||||||||||||| ||| || |||||| ||||||||||||| Sbjct 471 CACCCAGTCCGCATCCGCAACTTCTGATTCTATCCCACGTGCCTCCACAACTGCATCTCT 530 Query 480 CGCGGTTCTTTCTACCTTCCTCGTTCTCTGTCTTTTGTTCTTGTC-TCCGTGAAGTCTTA 538 ||||||||||||||||||||||||||| |||||||||||||| || || |||||||||| Sbjct 531 CGCGGTTCTTTCTACCTTCCTCGTTCTGTGTCTTTTGTTCTTATCGTCT-TGAAGTCTTA 589 Query 539 ATAACACATCTCAGAACATGTTTTATGGATAAAGAACACATT-ATATATGCCTCTTGGTG 597 ||||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||| Sbjct 590 ATAACACATCTCAGAACTTGTTTTATGGGTAAA-AACACATTTATATATGCCTCTTGGTC 648 Query 598 TTATGTCTTA-AACTCCTTTTCTTTTAAACTTCT 630 |||||| | | |||||| |||||| ||||||||| Sbjct 649 TTATGTAT-ACAACTCCCTTTCTTATAAACTTCT 681 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30391658935 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5