BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480909 Length=978 Score E Sequences producing significant alignments: (Bits) Value AT2G20740.1 | Symbols: | Tetraspanin family protein | chr2:893... 1363 0.0 > AT2G20740.1 | Symbols: | Tetraspanin family protein | chr2:8935607-8937512 FORWARD LENGTH=1067 Length=1067 Score = 1363 bits (738), Expect = 0.0 Identities = 830/873 (95%), Gaps = 12/873 (1%) Strand=Plus/Plus Query 24 TCTTTTTCGATTTCTCTTCCTCCTAGACCCAACCGACGAAGAGAATTTGATTTGTTGTTG 83 ||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||| | Sbjct 82 TCTTTATCGATTTCTCTTCTTCCTAGACCCAACAGACGAAGAGAATTTG--TTGTTG--G 137 Query 84 ATTGTGTCTGGTCTCTTCGTCTAGG--GTTTTTGGGTGATTAAAGATGGTGAGGATCGTG 141 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 138 -TTGTCTCTGGTCTCTTCGTCTAGGTTTTTTTTGGGTTATTAAAGATGGTGAGGATCGTG 196 Query 142 AGAAGTTGTTTACAGTCCATGTTAAAGCTCGTGAATTCTCTAATTGGGATGGTTGGGATT 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 197 AGAAGTTGTTTACAGTCCATGTTAAAGCTCGTGAATTCTCTAATTGGGATGGTTGGGATT 256 Query 202 GCTATGATTCTCTACGCTGTTTGGCTGATTAGGCAATGGCAAGAACAAATGGGAAATCTT 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 257 GCTATGATTCTCTACGCTGTTTGGCTGATTAGGCAATGGCAAGAACAAATGGGAAATCTT 316 Query 262 CCATTTGCTGATTCTGATCACCCTGTTCCATGGTTCATTTATTCATTTCTCGGTCTCGGG 321 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 317 CCTTTTGCTGATTCTGATCACCCTGTTCCGTGGTTCATTTATTCATTTCTTGGTCTCGGG 376 Query 322 GCCATTCTCTGTGTTGTCACTTGCGCCGGGCACATAGCTGCTGAAACCGTGAATGGATGT 381 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 377 GCCATTCTCTGTGTTGTCACTTGTGCCGGGCACATAGCTGCTGAAACCGTGAATGGATGT 436 Query 382 TGCCTTTACTTGTATATGGGATTCATTGTCTTGCTAGTTATGGTTGAAGGCGGTGTGGTT 441 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| Sbjct 437 TGCCTTTACTTGTATATGGGATTCATAGTCTTGCTAACTATGGTTGAAGGCGGTGTAGTT 496 Query 442 GCCGATATCTTTCTAAATCGTGACTGGAAAAAGGACTTTCCAGAGGATCCAAGTGGTGCT 501 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 497 GCCGATATCTTTCTAAACCGTGACTGGAAAAAGGACTTTCCAGAGGATCCAAGTGGTGCT 556 Query 502 TTCCACCAGTTCTCTAAGTTCATCAAGTCAAACTTCAAGATTTGCAAGTGGCTAGGTCTC 561 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 557 TTCCACCAGTTCTCTAAGTTCATCGAGTCAAACTTCAAGATTTGCAAGTGGATAGGTCTC 616 Query 562 TCTATTGTCTGTGTCCAGGGTCTATCAGTTTTATTAGCCATGTTGCTCAAAGCTCTTGGA 621 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 617 TCTATTGTCTGTGTCCAGGGTCTATCAGTTTTAATAGCCATGTTGCTCAAAGCTCTTGGA 676 Query 622 CCTCACCCTTACCGTCATTATGACAGTGACGATGAATACAATGTAAGCACAGTTGCACTC 681 ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 677 CCTCACCCTCACCGACATTATGATAGTGACGATGAATACAATGTAAGCACAGTTGCACTC 736 Query 682 CTGCAGGATGGTCGTCAGCCGCCTCCATACGTTGTTGGAGAACCCATGTATGGAGCCAAA 741 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 CTGCAGGATGCTCGTCAGCCGCCTCCATACGTTGTTGGAGAACCCATGTATGGAGCCAAA 796 Query 742 TCGGGAGCTTGGGCAGTTAGGATTAATGAAAGGGCGAACCGATGAGAGGTGCAAACCAAG 801 ||||||||||| ||||||| |||||||||||||| ||||| ||||||||| |||| ||| Sbjct 797 CCGGGAGCTTGGACAGTTAG-ATTAATGAAAGGGCAAACCGGTGAGAGGTGAAAACAAAG 855 Query 802 AAACTCGTAGAAGAAAAATGGCAAAG-AG--TCTGCTATTTCCATGTGTGCATTTACATT 858 ||||||||||||||||| |||||||| || |||||| ||||||||||||||||||| || Sbjct 856 AAACTCGTAGAAGAAAA-TGGCAAAGCAGAGTCTGCTCTTTCCATGTGTGCATTTACTTT 914 Query 859 GGCTTCTTGTTGCATCTCTTTCTTTCACTATTT 891 |||||||| |||||||||||||||||||||||| Sbjct 915 GGCTTCTTATTGCATCTCTTTCTTTCACTATTT 947 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47873142091 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5