BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480944
Length=1671
Score E
Sequences producing significant alignments: (Bits) Value
AT2G20950.4 | Symbols: | Arabidopsis phospholipase-like protei... 1122 0.0
> AT2G20950.4 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) family | chr2:9003139-9005938 FORWARD LENGTH=2260
Length=2260
Score = 1122 bits (607), Expect = 0.0
Identities = 695/738 (94%), Gaps = 3/738 (0%)
Strand=Plus/Plus
Query 917 GCACGCCGGTTCACTACAAGTATCAGATCACATCGGTGGAGACTTACGAGCAAGACAGGC 976
||| ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct 944 GCA-GCCGGTTCACTACAAGTATCAGATCACATCGGTAGAGACTTACGAGCAGGAGAGGC 1002
Query 977 AATTCGAGCCGCCGGAGCTGCCGGACGAGTCTGAGAGCTTCACGATGCACGAGATCGCCA 1036
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1003 AATTCGAGCCGCCGGAGCTGCCGGACGAGTCACAGAGCTTCACGATGCAGGAGATCGCCA 1062
Query 1037 AAATGCGCGGACTTCAAAGCTAC-GACAAGGAAGAGATACAGTTGGCGATATCCGAGACT 1095
|||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct 1063 GAATGCGCGGACTTCAAAGCTACGGA-AAGGAAGAGATACAATTAGCGATATCCGAGACT 1121
Query 1096 TACGTCTCCGTCGCCAATTACAAGGTGCGGATGAGCGTCGCCGCCACGCTCGAGGCGATC 1155
|||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||
Sbjct 1122 TACGTCTCCGTCGCCAATTACAAGGTACGGATGAGCATCGCCGCCACGCTCGAAGCGATC 1181
Query 1156 ATTGACAAACACGGTGACATCGCCGCCTCGTCGAAGTTGCAATCTACCTCAACGAGATCG 1215
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1182 ATTGACAAACACGGTGACATCGCCGCCTCGTCGAAGTTACAATCTACCTCAACGAGGTCG 1241
Query 1216 TTTTATCTCGAATCCCTAGCCGCAGCAGTGATGGAACTGAAATCGACGGCGTTGAGAGAT 1275
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1242 TTTTATCTCGAATCCCTAGCCGCAGCAGTAATGGAACTGAAATCAACGGCGTTGAGAGAT 1301
Query 1276 CTGACGAAGACGCGGGTGGCGGAGATCGCAGCGGTCGTGAAAGACATGGATTCGGTGAAA 1335
|||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct 1302 CTGACGAAGACGCGAGTGGCGGAAATCGCGGCGGTCGTGAAGGACATGGATTCGGTGAAA 1361
Query 1336 ATCGACGTATCATGGCTCAAAACAGCCGTCACGGAGCTAGCGGAGGCGGTGGAGTACTAC 1395
||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1362 ATCGATGTATCGTGGCTCAAAACAGCGGTGACGGAGCTAGCGGAGGCGGTGGAGTACTAC 1421
Query 1396 GGGAAGTACGACACGGCGAAAATCGTGAGAGAGGAGTGCGAAAGGGAAATGACGGAGGGG 1455
|||||||||||||||||||| || ||||| ||||||||||| ||||||||||||| ||||
Sbjct 1422 GGGAAGTACGACACGGCGAAGATTGTGAGGGAGGAGTGCGATAGGGAAATGACGGCGGGG 1481
Query 1456 AAAGAAGAGATggaggagctaagggaggagctgcggcggagagagaaggaaacgaaggaa 1515
||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1482 AAAAAAGAGATGGAGGAGATGAGGGAGGAGCTGCGGCGGAGAGAGAAGGAAACGAAGGAA 1541
Query 1516 agtagagagagagTGACGGCGATGGCGGGACGACTGGGGCAGCTGGAGATGAAGGAAGTG 1575
|||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||
Sbjct 1542 TGTAGAGAGAGAGTGACGGAGTTGGCGGGACGGCTGGGGCAGCTGGAGATGAAGGATGTG 1601
Query 1576 AGAGTGAAGAAGAATCTGGAGCTCTTTGAGAGCAAGGTCCTTAAATTCGACGGTCATTCT 1635
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1602 AGAGTGAAGAAGAATCTGGAGCTCTATGAGAGCAAGGTCCTTAAATTCGACGGTCATTCG 1661
Query 1636 GTTCTTGTTGACTGAACC 1653
||||| ||||||||||||
Sbjct 1662 GTTCTCGTTGACTGAACC 1679
Score = 793 bits (429), Expect = 0.0
Identities = 487/514 (95%), Gaps = 7/514 (1%)
Strand=Plus/Plus
Query 5 GATCTCCTCAGACGGCAGTTCATAACAAAACTCCTAATTTAA-AATTTGTTAATTGGATT 63
||||| ||||||||||||||||||||||||||||||| |||| |||||| || ||||||
Sbjct 1 GATCTTCTCAGACGGCAGTTCATAACAAAACTCCTAA-TTAAGAATTTGGTAGTTGGATC 59
Query 64 CCAGGTTTGCATACCGATCCCGGGATGGATTTCTTCCATTCAAGAGAGAAGAGACATGGC 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 60 CCAGGTTTGCATACCGATCCGGGGATGGATTTCTTCCATTCAAGAGAGAAGAGACATGGC 119
Query 124 AAAAGAGCAGGATTGTTTGGTCACAAAAGTGCGAGCAAGAGCAACCCGTCCAGCCCTCCT 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 120 AAAAGAGCAGGATTGTTTGGTCACAAAAGTGCGAGCAAGAGCAACCCGTCGAGCCCTCCT 179
Query 184 CATCTTGCTGAGGCTCGGTCTCTGCCGACAACTCATTTCGGTATGAAAAGATCAGAATCA 243
||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||
Sbjct 180 CATCTTGCTGAGGGTCGGTCTCAGCCGACAACTCATTTCGGCATGAAAAGATCGGAATCA 239
Query 244 GAGCACGCGTTTCCCATCTCCGATGAACAAACCACTCACTGGAAAC-A-A-CAGCGAGCC 300
||| |||||||||||||||||||||||||||||||||||||||||| | | |||| ||||
Sbjct 240 GAGTACGCGTTTCCCATCTCCGATGAACAAACCACTCACTGGAAACCACAACAGCAAGCC 299
Query 301 TCTGAACGCATTCCCAA-TTCCCACCAACGGCCTCCAGTCTACAGATATAGCACGCCCGA 359
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 300 TCTGAACGCAT-CCCAAATTCCCACCAACGGCCTCCAGTCTACAGATATAGCACGCCTGA 358
Query 360 GCGTCCTAGAGAGCCTGATGAGGATGTGACCCCAAGGAGCAACGGTTCTGGGAGCCCTTT 419
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 359 GCGTCCTAGAGAGCCTGATGAGGATGTGACTCCAAGGAGCAACGGTTCTGGGAGCCCTTT 418
Query 420 TCGATCTGCCAGAACCCGCACGCCTGATCGCCGTAGGAGGTCTAGCGAGTTAAGCAAAGA 479
|||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||
Sbjct 419 TCGATCTGCCAGAACCCGCACGCCTGATCGTCGTAAAAGGTCTAGCGAGATAACCAAAGA 478
Query 480 GCTGTACGAGAGAATGTATGAGGCAGAGGCCAAT 513
||||||||||||||||||||||||||| ||||||
Sbjct 479 GCTGTACGAGAGAATGTATGAGGCAGATGCCAAT 512
Score = 523 bits (283), Expect = 2e-147
Identities = 335/359 (93%), Gaps = 7/359 (2%)
Strand=Plus/Plus
Query 565 CATGACCGTGGAAGAGACTACAGTAGAGAAAGATATGAAGCT-AAGGGCAATGTAACTTC 623
||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 513 CATGAACGTGGAAGAGACTACAGTAGAGAAAGATATGAAGCTGAA-GGCAATGTAACTTC 571
Query 624 GCGGAACAGCGCTCCGTCAAGCCCATTTCATCCATCCCGAAGCCGCTCTCCACCGCAACA 683
||||||| | || |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 572 CCGGAACA--G-ACCTTCAAGCCCATTTCATCCATCCCAAAGCCGCTCTCCACCGCCACA 628
Query 684 GGCAAGGCCTCAGAGATACAACAACGGAAAAGATCATTTCGAGGGGATGTACGAGGCAGA 743
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 CGCAAGGACTCAGAGATACAACAACGGAAAAGATCATTTCGAGGGGATGTACGAGGCAGA 688
Query 744 TGCCGATATCACACCGCGTAACAGCCCTCCCATGAGTCCTGTTAATCA-CACCACGAGCT 802
||||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||
Sbjct 689 TGCCGATATCACACCGCGTAACAGCCCTCCCATGAGTCCTGTTCATCAACAC-ACAAGCT 747
Query 803 ACTCTCCACCACCGCCATTCTACTCATCCAGCGACGACGAAGACGACAACAATTCCACCT 862
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 748 ACTCTCCACCACCGCCGTTCTACTCATCCAGTGACGACGAAGACGACAACAATTCCACCT 807
Query 863 ACCTCTTTCCAGAAATTGCAACAGGACGTCGTTCCAGGGGAGTCTCAGGGAGCAGCACG 921
| ||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||
Sbjct 808 ATCTCTTTCCAGAAATTGCCACTGGACGTCGTTCCAGGGGAGTTTCAGGAAGCAGCACG 866
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82579896525
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5