BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480948
Length=2421
Score E
Sequences producing significant alignments: (Bits) Value
AT2G20960.1 | Symbols: pEARLI4 | Arabidopsis phospholipase-like... 3840 0.0
> AT2G20960.1 | Symbols: pEARLI4 | Arabidopsis phospholipase-like
protein (PEARLI 4) family | chr2:9006648-9009763 FORWARD
LENGTH=2533
Length=2533
Score = 3840 bits (2079), Expect = 0.0
Identities = 2320/2434 (95%), Gaps = 26/2434 (1%)
Strand=Plus/Plus
Query 1 TTCTTCTTCCTCAATAAT-ATTTTATTCTCAGATTTGAGATCTTATTATAGAG-TTTGGT 58
||||||||||||||| || ||||| ||| ||| ||||||||||||| |||||| |||| |
Sbjct 63 TTCTTCTTCCTCAATTATAATTTT-TTCACAGGTTTGAGATCTTATCATAGAGTTTTGTT 121
Query 59 TTAAGTTTGTGAGATGGACTTAGTGTCTGGAAAAGTAGTTCCAGGTTGCTCCAACGCAGG 118
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 122 TTAAGTTTGTGAGATGGAATTAGTGTCTGGAAAAGTAGTTCCAGGTTGCTCCAACGCAGG 181
Query 119 CAATCCTTTCCATGAGTGTACTGCTATCTGTTTTGAGAGATTAAACTCTCCAGATGTCCA 178
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 182 CAATCCTTTCCATGAGTGTACTGCTATCTGTTTTGAGAGAGTAAACTCTCCAGATGTCCA 241
Query 179 CAAGAAGGAGAAGAAACTCTTTGGGTTTGGTAAGAGAACTCCAAGCAGGGATCAGACTCC 238
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 242 CAAGAAGGAGAAGAAACTCTTTGGGTTTGGTAAGAGAACTCCCAGCAGGGATCAGACTCC 301
Query 239 TCCAGGC-AGTCCAGCTCGTGGAAGCAGATCACCTCTGGCCAGCTATTTCGCCAAGAAGA 297
|||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 TCCA-GCTAGTCCGGCTCGTGGAAGCAGATCACCTCTGGCCAGCTATTTCGCCAAGAAGA 360
Query 298 AGGTTGA--C-TCATCAGAGAGTTCACCATCCTCCAATGATCACACCAATGGCAACTTCT 354
||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 AGGTTGAGTCGTCAGCAGAGAGTTCACCATCCTCTTATGATCACACCAATGGCAACTTCT 420
Query 355 TAAGTCGCCTTTCCCCGCTACAGGGACGCAAGATCGAGCCTTCAAGCAATGTCGATTCGC 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TAAGTCGCCTTTCCCCGCTACAGGGACGCAAGATCGAGCCTTCAAGCAATGTCGATTCGC 480
Query 415 TACCAGGCTCGCCTTCTCTCGCTCTATATTCAGGGGGAGACTACTTTGCAAGGAGGACTG 474
| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 481 TGCCAGTTTCGCCTTCTCTCGCTCTATACTCAGGGGGAGACTACTTTGCAAGGAGGGCTG 540
Query 475 ATCAGCGTGGAGATGAGGATGATGATGTATCACCAAGGCCTTTTGGAACTCAGCCAAAGA 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 541 ATCAGCGTGGAGATGAGGATGATGATGTATCACCAAGGCCTTTTGGAACTCAGCCTAAGA 600
Query 535 CCCCTGAACACCCTCTTAGGACGCCTCAGCATAGGCCACGCACACCGCAACATCGCTCTG 594
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 601 CCCCTGAACACCCTCTTAGGACGCCTCAGCATAGGCCACGCACACCGCAACACCGCTCTG 660
Query 595 CACACCAAGAGGAC-CATGTTTT-ACTAGAAACTAGGCCGAGGACTCCTGAACGCCGATC 652
|||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||
Sbjct 661 CACACCAAGAGGACGC-T-TTTTCACTAGAAACTAGGCCGAGGACTCCTGAACGCCGATC 718
Query 653 CAATACCTCTGATACTAGGCCAAGGACACCCATACATGAGTATGCGGCAACAGGAAGAAG 712
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 719 CAATACCTCTGATACTAGGCCAAGGACACCCATACATGAGTCTGCGGCAACAGGAAGAAG 778
Query 713 ACCTCAAACACCAGAAACTAGACCGAGGACTCCTGATCACCGATATGCCACCTCTGATAC 772
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 779 GCCTCAAACACCAGAAACTAGACCAAGGACTCCTGATCACCGATATGCCACCTATGATAA 838
Query 773 TAGGCCGAGGACACCCATACATGAGTCTGCTGCAAGAGGAAGGAGGCCCCAAACACCAGA 832
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 839 TAGGCCGAGGACACCCATACATGAGTCTGCTGCAACAGAAAGGAGGCCCCAAACACCAGA 898
Query 833 AACTAGGCCGAGGACTCCTGAACACCGATATGCCA-CCTCTGACACTAGACCGAGGACAC 891
||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||
Sbjct 899 AACTAGGCCGAGGACTCCTGAACACCGATCTGCCATCC-CTGACACTAGGCCGAGGACAC 957
Query 892 CCATACATGAGTCTGCTGCAACAGGAAGGAGGCCTCAAACACCAGAAACTAGGCCGAGGA 951
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CTATACATGAGTCTGCTGCAACAGGAAGGAGGCCTCAAACACCAGAAACTAGGCCGAGGA 1017
Query 952 CTGCACAACATAGAGGGAGGTCACCTGAGTTCATGGAAAGATCCCCCGGGCCATGGTCCA 1011
||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1018 CTGCACAACGTAGAGGGAGGTCACCTGAGTTCATGGAAAGATCCCCCGGACCAAGGTCCA 1077
Query 1012 AGACCCCAGAGCCTCAACCTACCTACTTTGAACCATCTTCAAGGACTCCAAAA-ATGCGG 1070
|||||||||||||||||||||| ||||| |||||||| ||||||||||||||| | ||||
Sbjct 1078 AGACCCCAGAGCCTCAACCTACTTACTTCGAACCATCCTCAAGGACTCCAAAACA-GCGG 1136
Query 1071 TCCAAGACGCCAGAACCCAGCCCTAGGATTCCCCAAACTCAGCCCATATCCCATAGATCC 1130
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1137 TCCAAGACGCCTGAACCCAGCCCTAGGATTCCCCAAACTCAGCCCATGTCCCACAGATCC 1196
Query 1131 CTTGACAACGCCGCTCTTCAAAA-GCCTCGAACAGTTGAAACTAGGCCTAGGACGCCGGA 1189
||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||| ||
Sbjct 1197 CTTGACAACGCTGCTCTT-AAAATGCCTCGGACAGTTGAAACTAGGCCTAGGACGCCAGA 1255
Query 1190 ACACCAGCCGAGGACTGTGGAAACAAAGCCAAGAATACATGAAAGTAGG-CCAAAGACTG 1248
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1256 ACACCAGCCGAGGACTGTGGAAACAAAGCCAAGAATACATGAAAGTAGGCCCAAA-ACTG 1314
Query 1249 CAGTCTATGGAGGAAGGTCACCTGATCACAGGGAAAAAATCTCACAAACTCAAATGGGTC 1308
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1315 CAGTCTATGGAGGAAGGTCACCTGATCACAGGGAAAAAATCTCAC-AA--GAAATGGGTC 1371
Query 1309 AAAGATCATCTCATGCCTACAATTATCTTGGGAGCAAAGCTGAATCAGTGTACATTGAGA 1368
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1372 AAAGATCATCTCATGCCTACAATTATCTTGGGAGCAAAGCTGAGTCAGTGTACATTGAGA 1431
Query 1369 AGGACGATGAATCAGTTCTACTCTTTCCAGAACTGATTTTGTCACCTCAAGAAAGGCCAC 1428
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 AGAACGAGGAATCAGTTCTACTCTTTCCAGAACTGATTTTGTCACCTCAAGAAAGGCCAC 1491
Query 1429 CCTCTAGACTTATTACGCTTAATCACCGAGGATATGAAACACCTAACAAACAGGAAGAAC 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1492 CCTCTAGACTTATTACGCTTAATCACCGAGGATATGAAACACCTAACAAACAGAAAGAAC 1551
Query 1489 ATTGTGATGAAATGGATGATTCTGAAAGCACAGACGACGATAAATTTTCATTTGTGGATG 1548
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1552 ATTGTGATGAAATGGATGATTCTGCAAGCACAGACGACGATAAATTTTCATTTGTGGATG 1611
Query 1549 ATCATGAAGAACACACTGTTTCGTTTTACCCTGAAACCACATCGAAATCTGGAAGCAGCG 1608
|||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1612 ATCACGACGAACACACTGTTTCAATTTACGCTGAAACCACATCGAAATCTGGAAGCAGCG 1671
Query 1609 AACAAGAGGAACAACATAAAGCAAACAACGAGCCACCGGAGCTGCCAGATGAATCACAGG 1668
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1672 AACAAGAGGAACAGCATAAAGCAAACAACGAGCCACCGGAGCTGCCAGATGAATCACAGA 1731
Query 1669 GCTTCAGTCTCG-TAGAGATCTCTCGTATGAAAGGAATAATTACCAAGAATGAAACAAGG 1727
|||||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1732 GCTTCAGTCTCGCT-GAGATCTCTCGTATGAAAGGAATAATTACCAATAATGAAATAAGG 1790
Query 1728 GACGAGATGCAGTCCATTCTATCTGAGTCTTACGTTTCTGTGGGAGACTACAAGGTGAGA 1787
|||| ||||||||| |||||||||||||||||||||||||||||| | |||||||| |||
Sbjct 1791 GACGTGATGCAGTCTATTCTATCTGAGTCTTACGTTTCTGTGGGACAGTACAAGGTCAGA 1850
Query 1788 GCTAGCGTCTCGGCCACTCTACAACACATACTCCAGAAGCACGGCGACATCGCGTCCGGT 1847
|||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 1851 GCTAGCGTCTCGACCACTCTACAACACATACTCCAGAAGCACGGTGACATTGCGTCTGGT 1910
Query 1848 TCCAAACTACAATCACTTGCCACACGATCCTACTACCTCGACATGCTTGCCTCGGTGGTA 1907
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1911 TCCAAACTACAATCGCTTGCTACACGATCCTACTACCTCGACATGCTTGCCTCGGTGGTA 1970
Query 1908 TTCGAACTCCAGACAACTCCCCTGAAGTATCTCAAGGAAAGCCGCGTGGTGGAAATGGTA 1967
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1971 TTCGAACTCCAAACAACTCCCCTGAAGTATCTCAAGGAGAGCCGCGTGGTGGAAATGGTA 2030
Query 1968 GCGATTGTTAGAGACGTTGAGTCTGTGAAAATCAAAGCAGGTTGGCTCAAGCCTGTCCTG 2027
|||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2031 GCGATTGTTAAAGACATTGAGTCCGTGAAAATCAAAGCAGGTTGGCTCAAGCCTGTCCTG 2090
Query 2028 GAGGAGATCGTAGAGGCGGTAAAACACTACGATGAACACAAGATGAGCATAATGGAGAAA 2087
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2091 GAGGAGATCGTAGAGGCGGTAAAACACTACGATGAACACAAGATGAGCGTAGTGGAGAAA 2150
Query 2088 GAGGTGTGGGAGAGAGATGTGTTACTTGCgagacaagaaacggagaaacaggtgaaagaa 2147
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2151 GAGGTGTGGGAGAGAGATGTGTTACTTGCGAAACAAGAAACTGAGAAACAGGTGAAAGAA 2210
Query 2148 ctgggagagaaagagaagaagatgaaggagtggagagCTAGAATGACGGAGATGGCTGCG 2207
||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 2211 CTGGGAGAGAAGGAGAAGAAGATAAAGGAGTGGAGAGCTAAAATGACGGAGATGGCTGCG 2270
Query 2208 AAGTTAGGGGGTCTTGATATGAAAAGAGCTCGTCTCCACAAAAGCTTCACATTTCTGAGC 2267
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2271 AAGTTAGGGGATCTTGATATGAAAAGAGCTCGTCTCCACAAAAGCTTCACATTTCTGAGC 2330
Query 2268 TCCAAGGTCGACAAGTTTCAGGGGAAACCCCTTCTTCAAGGCATCTTGTGACCAACCAAA 2327
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2331 TCCAAGGTCGACAAGTTTCAAGGGAAACCCCTTCTTCAAGGCATCTTGTAACCAACCAA- 2389
Query 2328 TTAGTCCGAATATTCTTTTGTTCATCTTGTTACCCGCAAAATAAGCGTTTGTGAACGGTT 2387
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2390 TTAGTCTGAATATTCTTTTGTTCATCTTGTTACCCGCAAAATAAGCGTTTGTGAACGGTT 2449
Query 2388 TGTTTTGGAAAACTTTGATATATTATCAAAATTT 2421
|| ||||||||| ||| || |||||||||| |||
Sbjct 2450 TGCTTTGGAAAAGTTTTATGTATTATCAAATTTT 2483
Score = 303 bits (164), Expect = 4e-81
Identities = 210/233 (90%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 721 CACCAGAAACTAGACCGAGGACTCCTGATCACCGATATGCCACCTCTGATACTAGGCCGA 780
||| ||||||||| |||||||||||||| | ||||| ||||||||||||||||| |
Sbjct 682 CACTAGAAACTAGGCCGAGGACTCCTGAACGCCGATCCAATACCTCTGATACTAGGCCAA 741
Query 781 GGACACCCATACATGAGTCTGCTGCAAGAGGAAGGAGGCCCCAAACACCAGAAACTAGGC 840
|||||||||||||||||||||| |||| |||||| ||||| ||||||||||||||||| |
Sbjct 742 GGACACCCATACATGAGTCTGCGGCAACAGGAAGAAGGCCTCAAACACCAGAAACTAGAC 801
Query 841 CGAGGACTCCTGAACACCGATATGCCACCTCTGACACTAGACCGAGGACACCCATACATG 900
| ||||||||||| |||||||||||||||| ||| | ||| |||||||||||||||||||
Sbjct 802 CAAGGACTCCTGATCACCGATATGCCACCTATGATAATAGGCCGAGGACACCCATACATG 861
Query 901 AGTCTGCTGCAACAGGAAGGAGGCCTCAAACACCAGAAACTAGGCCGAGGACT 953
||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 862 AGTCTGCTGCAACAGAAAGGAGGCCCCAAACACCAGAAACTAGGCCGAGGACT 914
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120230305275
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5