BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480981 Length=505 Score E Sequences producing significant alignments: (Bits) Value AT2G21237.1 | Symbols: | unknown protein; Has 10 Blast hits to... 669 0.0 > AT2G21237.1 | Symbols: | unknown protein; Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9100536-9101215 REVERSE LENGTH=680 Length=680 Score = 669 bits (362), Expect = 0.0 Identities = 470/519 (91%), Gaps = 19/519 (4%) Strand=Plus/Plus Query 1 AACAACAAAATGGTAGAGAAAGCCACAGT-----A----GAGACGCAGCAAGCGG-CACA 50 |||||||||||| | |||||||||||||| | |||||||| ||| ||| |||| Sbjct 23 AACAACAAAATGATGGAGAAAGCCACAGTGGCGCATGTGGAGACGCATCAA-CGGTCACA 81 Query 51 AGAGATATGGTTTCTTGCCTCCGCAAGAGCCTTCTTGCAAATTCCGAATCCGGGTATTGT 110 ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| Sbjct 82 AGAGATATGGTTTCTTGGCGCCGCAAGAGCCTTCTTGCAAATTCCGAATCCGGGGATTGT 141 Query 111 TAAAGTTTTCGTCCTAAGCAGCTTGATTACGTTCACCTCAGGAATTGCCTTAGTCATTGA 170 |||||||| |||||||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct 142 CAAAGTTTTTGTCCTAAGCAGCTTGACTACATTCACCTCAGGAATGGCTTTAGTCATTGA 201 Query 171 ATGGATCTGTCACGGAAAGAGTCACACCGGATTTGGGTGGATCATCTACTACGCATTGTT 230 |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 202 GTGGATCTGTCACGGAAAGAGTCACACGGGATTCGGGTGGATCATCTACTATGCATTGTT 261 Query 231 CTTGATGTGTCTTCCTCTTGTCATCTTGATCGGTCTTCATATCCTCGTGC-GTCGCGGCT 289 |||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct 262 CTTGATGTGTCTTCCTCTTGTCATCTTGATCGGTCTTCATATTCTCGT-CAGGCGCGGCT 320 Query 290 CAGATCAGATTGTAGATTCAAC-CACAAGCAAAGAGCCATGTGTTGTGCAGAATCAGTGT 348 ||||||||||||| |||||||| | |||||||||| || ||||| |||||||||||| || Sbjct 321 CAGATCAGATTGTGGATTCAACTC-CAAGCAAAGAACCGTGTGTGGTGCAGAATCAGAGT 379 Query 349 ACCGAGA-GTACTAAACGAACTGAAGAAACGGAGAAAAACAGTTGCCAAAGTTTAGCCGT 407 ||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 380 ACCGAGACG-ACTAAACGAACTGAAGAAACGGTGAAAAACAGCTGCCAAAGTTTAGCCGT 438 Query 408 TGTGGTTGCTCCGGATGACGAA-AAGATGCCGAGGATAAAACGCGCTGTTTCGTTCCCAT 466 ||||||||||||||||||| || ||||||||||||||||||||||| || || ||||| | Sbjct 439 TGTGGTTGCTCCGGATGAC-AAGAAGATGCCGAGGATAAAACGCGCAGTGTCATTCCCGT 497 Query 467 CTCACGGCGAAGTAAGATCATGTCGTACTCGTTAGCAAA 505 ||||||||||||||||||||||||| ||||||||||||| Sbjct 498 CTCACGGCGAAGTAAGATCATGTCGAACTCGTTAGCAAA 536 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24112390560 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5