BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480985
Length=1158
Score E
Sequences producing significant alignments: (Bits) Value
AT2G21250.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1764 0.0
AT2G21260.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1463 0.0
> AT2G21250.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily
protein | chr2:9103207-9105187 REVERSE LENGTH=1202
Length=1202
Score = 1764 bits (955), Expect = 0.0
Identities = 1096/1162 (94%), Gaps = 18/1162 (2%)
Strand=Plus/Plus
Query 1 ACACTGAGAAACTCTCAATCTGAGCAGATATTTACCCAATCAGGGATTCAGGAAGAGAAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACACTGAGAAACTCTCAATCTGAGCAGATATTTACCCAATCAGGGATTCAGGAAGAGAAG 60
Query 61 CGAGAAG-AAGAAATGGAGATAACACTGAACAGTGGTTTCAAGATGCCGATCGTCGGCTT 119
| || || |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 61 C-AG-AGAAAGAAATGGAGATAACACTGAACAGTGGCTTCAAGATGCCGATCGTCGGCTT 118
Query 120 AGGAGTGTGGAGAATGGAGAAAGAAGGGATTCGAGACCTTATCATCAATGCCATCAAGAT 179
|||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 119 AGGAGTATGGAGAATGGAGAAGGAAGGGATTCGAGACCTTATCCTCAATGCCATCAAGAT 178
Query 180 CGGCTATCGCCATCTCGACTGTGCTGCTGATTATAGGAACGAGGCCGAAGTTGGTGAGGC 239
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct 179 CGGCTATCGCCATCTCGACTGTGCTGCTGATTATAGGAATGAGACCGAAGTTGGTGATGC 238
Query 240 GCTTACAGAAGCATTCAAGACGGGTCTGGTCAAGAGGGAGGATCTCTTCATTACTACCAA 299
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct 239 TCTTACAGAAGCATTCAAGACTGGTCTGGTTAAGAGGGAGGATCTCTTCATTACAACCAA 298
Query 300 GCTATGGAATTCTGACCATGGCCATGTTATTGAGGCGTGCAAAGACAGTCTCAAGAAACT 359
|||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 299 GCTATGGAATTCAGACCATGGCCATGTCATTGAGGCCTGCAAAGACAGTCTCAAGAAACT 358
Query 360 TCAACTTGATTACCTCGACCTTTTTCTCGTTCATTTTCCCGTAGCAACGAAACACACCGG 419
|||||||||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct 359 TCAACTTGATTACCTCGATCTCTTCCTCGTTCATTTTCCCGTAGCAACGAAACACACCGG 418
Query 420 AGTAGGAACAACCGATAGTGCTTTGGGCGATGACGGGGTATTGGACATAGACACGACCAT 479
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 AGTAGGGACAACCGATAGTGCTTTGGGCGATGACGGGGTATTGGACATAGACACGACCAT 478
Query 480 CTCTTTGGAAACTACATGGCATGACATGGAAAAACTTGTTTCTATGGGTTTGGTCCGCAG 539
|||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct 479 CTCTCTGGAAACTACATGGCACGACATGGAAAAGCTTGTTTCTATGGGTTTAGTCCGCAG 538
Query 540 CATTGGAATCAGTAACTATGACGTCTTTCTAACGAGAGATTGCTTGGCATACTCCAAGAT 599
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 539 CATTGGAATCAGTAACTATGATGTCTTTCTAACGAGAGATTGCTTGGCTTACTCCAAGAT 598
Query 600 CAAACCTGCTGTGAATCAAATCGAGATACATCCTTACTTCCAACGTGATTCTCTTGTCAA 659
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 599 CAAACCTGCTGTGAATCAGATCGAGACACATCCTTACTTCCAACGTGATTCTCTTGTCAA 658
Query 660 ATTCTGCCAGAAACATGGTATCTGTGTCACTGCTCATACTCCTCTCGGAGGTGCCACAGC 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 ATTCTGCCAGAAACATGGTATCTGTGTCACTGCTCATACTCCTCTCGGAGGTGCCACAGC 718
Query 720 CAACGCTGAGTGGTTTGGCACCGTGTCATGTCTGGATGACCCAGTTCTCAAAGATGTGGC 779
||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 719 CAATGCCGAGTGGTTTGGCACCGTGTCATGCCTGGATGATCCAGTTCTCAAAGATGTGGC 778
Query 780 GGAGAAGTACAAAAAGACAGTGGCACAGGTTGTCCTGAGGTGGGGAATCCAGAGGAACAC 839
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct 779 CGAGAAGTACAAAAAGACAGTGGCACAAGTTGTCCTGAGGTGGGGAATCCAGAGAAAAAC 838
Query 840 AGTGGTGATACCAAAGACATCGAAGCCTACGAGATTGGAAGAGAA-TTTCCAGGTTTTCG 898
|||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||
Sbjct 839 GGTGGTGATACCAAAGACATCAAAGCCTGCGAGATTGGAAGAGAACTTTC-AGGTTTTCG 897
Query 899 ACTTCGAACTGTCAAAAGAGGACATGGAAGTGATCAAGACCATGGACAGGAAATACCGCA 958
|||||||||| || ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct 898 ACTTCGAACTATCGAAAGAGGACATGGAAGTGATCAAAAGCATGGAGAGGAAATACCGCA 957
Query 959 CGAACCAACCAGCCAAGTTTTGGGGCATTGACCTCTACGCTTGATGATCACACGCATTCT 1018
||||||||||||||||||||||| |||||| ||||||||||||| ||||| | ||
Sbjct 958 CGAACCAACCAGCCAAGTTTTGGAACATTGATCTCTACGCTTGAT---CACAC---T-CT 1010
Query 1019 CTCTATCTACATGAATAAATGAAGCTTAAGAAGATAAACAA-GAGAAGAAGCCATAGCTT 1077
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1011 CTCTATCTACATGAATAAATGAAGCTTAAGAAGATAAACAACGAGAAGAAGCCATAGCTT 1070
Query 1078 TACTTGCAACAACATTCTTAAATGTTTGTGAGCCTATCTTTCATATATAAACTCATGTT- 1136
||| || || | |||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1071 TACCTG-AA-A-CATTCTCAAATGTTTGTGAGCCTATCTTTCATACATAAACTCATGTTG 1127
Query 1137 TATAAACAGATTATGATTTCTT 1158
| ||||||||||||||||||||
Sbjct 1128 T-TAAACAGATTATGATTTCTT 1148
> AT2G21260.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily
protein | chr2:9105583-9107380 REVERSE LENGTH=1112
Length=1112
Score = 1463 bits (792), Expect = 0.0
Identities = 975/1063 (92%), Gaps = 13/1063 (1%)
Strand=Plus/Plus
Query 3 ACTGAGAAACTCTCAA-TCTGAGCAGATATTTACCCAATCAGGGATTCAGGAAGAGAAGC 61
|||| ||||||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||
Sbjct 3 ACTGGGAAACTCTCAATTCTGAGCAGATATCTACCCAATCACGGATTGAGG-AGAGAAGC 61
Query 62 GAGAAGAAGAAATGGAGATAACACTGAACAGTGGTTTCAAGATGCCGATCGTCGGCTTAG 121
|||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||
Sbjct 62 AAGAAGAAGAAATGGAGATTACACTGAACAGTGGCTTCAAAATGCCGATCATCGGCTTAG 121
Query 122 GAGTGTGGAGAATGGAGAAAGAAGGGATTCGAGACCTTATCATCAATGCCATCAAGATCG 181
|||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct 122 GAGTTTGGAGAATGGAGAAAGAAGAGCTTCGAGACCTTATCATCGATGCCATCAAGATCG 181
Query 182 GCTATCGCCATCTCGACTGTGCTGCTGATTATAGGAACGAGGCCGAAGTTGGTGAGGCGC 241
| ||||| |||||||||||||||||| |||||| |||||| || |||||||||||||| |
Sbjct 182 GTTATCGTCATCTCGACTGTGCTGCTAATTATAAGAACGAAGCTGAAGTTGGTGAGGCTC 241
Query 242 TTACAGAAGCATTCAAGACGGGTCTGGTCAAGAGGGAGGATCTCTTCATTACTACCAAGC 301
||||||||||||||| ||| ||||| |||||||||||||||||||||||||| || ||||
Sbjct 242 TTACAGAAGCATTCACGACAGGTCTTGTCAAGAGGGAGGATCTCTTCATTACGACTAAGC 301
Query 302 TATGGAATTCTGACCATGGCCATGTTATTGAGGCGTGCAAAGACAGTCTCAAGAAACTTC 361
|||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 302 TATGGAGTTCAGACCATGGCCATGTTATTGAGGCATGCAAAGACAGTCTCAAGAAACTTC 361
Query 362 AACTTGATTACCTCGACCTTTTTCTCGTTCATTTTCCCGTAGCAACGAAACACACCGGAG 421
|||||||||||||||||||||| ||||||||| | ||| |||| || |||||||| |||
Sbjct 362 AACTTGATTACCTCGACCTTTTCCTCGTTCATATACCCATAGCTACAAAACACACGGGAA 421
Query 422 TAGGAACAACCGATAGTGCTTTGGGCGATGACGGGGTATTGGACATAGACACGACCATCT 481
||||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||
Sbjct 422 TAGGAACAACCGATAGTGCTTTGGGGGATGATGGGGTATTGGACATAGATACAACAATCT 481
Query 482 CTTTGGAAACTACATGGCATGACATGGAAAAACTTGTTTCTATGGGTTTGGTCCGCAGCA 541
|| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 482 CTCTGGAAACTACATGGCACGACATGGAAAAGCTTGTTTCTATGGGTTTAGTCCGCAGCA 541
Query 542 TTGGAATCAGTAACTATGACGTCTTTCTAACGAGAGATTGCTTGGCATACTCCAAGATCA 601
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 542 TTGGAATCAGTAACTATGATGTCTTTCTAACGAGAGATTGCTTGGCTTACTCCAAGATCA 601
Query 602 AACCTGCTGTGAATCAAATCGAGATACATCCTTACTTCCAACGTGATTCTCTTGTCAAAT 661
|||||||||||||||| ||||||| |||||||||||||||||| |||||||| |||||||
Sbjct 602 AACCTGCTGTGAATCAGATCGAGACACATCCTTACTTCCAACGCGATTCTCTAGTCAAAT 661
Query 662 TCTGCCAGAAACATGGTATCTGTGTCACTGCTCATACTCCTCTCGGAGGTGCCACAGCCA 721
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 662 TCTGCCAGAAACATGGTATCTGTGTCACTGCTCATACTCCTCTGGGAGGTGCCACAGCCA 721
Query 722 ACGCTGAGTGGTTTGGCACCGTGTCATGTCTGGATGACCCAGTTCTCAAAGATGTGGCGG 781
| || || |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 722 ATGCCGAATGGTTTGGCACCGTGTCATGTCTGGATGACCCAGTTCTCAAAGATGTGGCCG 781
Query 782 AGAAGTACAAAAAGACAGTGGCACAGGTTGTCCTGAGGTGGGGAATCCAGAGGAACACAG 841
||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |
Sbjct 782 AGAAGTACAAACAGACAGTGGCACAGATTGTCCTGAGGTGGGGAATTCAGAGGAACACGG 841
Query 842 TGGTGATACCAAAGACATCGAAGCCT-ACGAGATTGGAAGAGAATTTCCAGGTTTTCGAC 900
|||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct 842 TGGTGATACCAAAGACATCGAAGCCTGAA-AGATTGGAAGAGAATTTTCAGGTTTTCGAC 900
Query 901 TTCGAACTGTCAAAAGAGGACATGGAAGTGATCAAGACCATGGACAGGAAATACCGCACG 960
||| |||| || ||||||||||||||||||||||| | |||||| ||||| |||||||||
Sbjct 901 TTCCAACTATCGAAAGAGGACATGGAAGTGATCAAAAGCATGGAGAGGAATTACCGCACG 960
Query 961 AACCAACCAGCCAAGTTTTGGGGCATTGACCTCTACGCTTGATGATCACACGCA-T-TCT 1018
||||| |||||||||||||||||||||| ||||||||||||| | ||||| || | |||
Sbjct 961 CACCAAACAGCCAAGTTTTGGGGCATTGAGCTCTACGCTTGATCA-CACACACACTCTCT 1019
Query 1019 CTCT--ATCTA-C-AT--GAATAAATGAAGCTTAAGAAGATAA 1055
|||| ||||| | || |||||||||||||||||||| ||||
Sbjct 1020 CTCTCTATCTATCTATATGAATAAATGAAGCTTAAGAATATAA 1062
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56827016940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5