BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480986
Length=1003
Score E
Sequences producing significant alignments: (Bits) Value
AT2G21260.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1463 0.0
AT2G21250.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1432 0.0
> AT2G21260.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily
protein | chr2:9105583-9107380 REVERSE LENGTH=1112
Length=1112
Score = 1463 bits (792), Expect = 0.0
Identities = 936/1006 (93%), Gaps = 7/1006 (1%)
Strand=Plus/Plus
Query 1 CTGAGCAGATATTTACCCAATCAGGGGTTGAGGAAGAGAAGCAAGAAGCAGAAATGGAGA 60
|||||||||||| |||||||||| || |||||| |||||||||||||| |||||||||||
Sbjct 21 CTGAGCAGATATCTACCCAATCACGGATTGAGG-AGAGAAGCAAGAAGAAGAAATGGAGA 79
Query 61 TAACACTGAACAATGGTTTCAAGATGCCGATCGTCGGCTTAGGAGTGTGGAGAATGGAGA 120
| |||||||||| ||| ||||| ||||||||| ||||||||||||| |||||||||||||
Sbjct 80 TTACACTGAACAGTGGCTTCAAAATGCCGATCATCGGCTTAGGAGTTTGGAGAATGGAGA 139
Query 121 AAGAAGAGATTCGAGACCTTATCATCAG-TGCCATCAAGAAT-GGCTATCGCCATCTCGA 178
|||||||| ||||||||||||||||| | |||||||||| || || ||||| ||||||||
Sbjct 140 AAGAAGAGCTTCGAGACCTTATCATC-GATGCCATCAAG-ATCGGTTATCGTCATCTCGA 197
Query 179 CTGTGCTGGTAATTATAAGAACGAAGCTGAAGTTGGTGAGGCGCTTACAGAAGCATTCAA 238
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 198 CTGTGCTGCTAATTATAAGAACGAAGCTGAAGTTGGTGAGGCTCTTACAGAAGCATTCAC 257
Query 239 GACGGGTCTGGTCAAGAGGGAGGATCTCTTCATTACTACCAAGCTATGGAATTCTGACCA 298
||| ||||| |||||||||||||||||||||||||| || |||||||||| ||| |||||
Sbjct 258 GACAGGTCTTGTCAAGAGGGAGGATCTCTTCATTACGACTAAGCTATGGAGTTCAGACCA 317
Query 299 TGGCCATGTTATTGAGGCGTGCAAAGACAGTCTCAAGAAACTTCAACTTGATTACCTCGA 358
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 318 TGGCCATGTTATTGAGGCATGCAAAGACAGTCTCAAGAAACTTCAACTTGATTACCTCGA 377
Query 359 CCTTTTCCTCGTTCATTTACCCGTAGCAACGAAACACACGGGAGTAGGAACAACCGATAG 418
|||||||||||||||| ||||| |||| || |||||||||||| ||||||||||||||||
Sbjct 378 CCTTTTCCTCGTTCATATACCCATAGCTACAAAACACACGGGAATAGGAACAACCGATAG 437
Query 419 TGCTTTGGGCGATGACGGGGTATTGGACATAGACACAACAATCTCTCTGGAAACTACATG 478
||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 438 TGCTTTGGGGGATGATGGGGTATTGGACATAGATACAACAATCTCTCTGGAAACTACATG 497
Query 479 GCACGACATGGAAAAGCTTGTTTTC-ATGGGTTTGGTCCGCAGCATTGGACTCAGTAACT 537
|||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||
Sbjct 498 GCACGACATGGAAAAGCTTG-TTTCTATGGGTTTAGTCCGCAGCATTGGAATCAGTAACT 556
Query 538 GTGATGTCTTTCTAACGAGAGATTGCTTGGCTTACTCCAAGATCAAGCCTGCAGTGAATC 597
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 557 ATGATGTCTTTCTAACGAGAGATTGCTTGGCTTACTCCAAGATCAAACCTGCTGTGAATC 616
Query 598 AGATAGAGACACACCCTTACTTCCAACGCGATTCTCTTGTCAAGTTTTGCCAGAAACACG 657
|||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||||| |
Sbjct 617 AGATCGAGACACATCCTTACTTCCAACGCGATTCTCTAGTCAAATTCTGCCAGAAACATG 676
Query 658 GTATCTGTGTCACCGCTCATACTCCCCTCGGAGGTGCCACAGCCAATGCCGAATGGTTTG 717
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 677 GTATCTGTGTCACTGCTCATACTCCTCTGGGAGGTGCCACAGCCAATGCCGAATGGTTTG 736
Query 718 GCTCTGTGTCATGCCTGGATGACCCAGTTCTCAAAGATGTGGCGGAGAAGTACAAAAAGA 777
|| | |||||||| ||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 737 GCACCGTGTCATGTCTGGATGACCCAGTTCTCAAAGATGTGGCCGAGAAGTACAAACAGA 796
Query 778 CAGTGGCACAGGTTGTCCTGAGGTGGGGAATTCAGAGAAACACAGTGGTGATACCAAAGA 837
||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 797 CAGTGGCACAGATTGTCCTGAGGTGGGGAATTCAGAGGAACACGGTGGTGATACCAAAGA 856
Query 838 CATCAAAGCCTGCAAGATTGGAAGAGAATTTTCAAGTTTTCGACTTCGAACTATCAAAAG 897
|||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||
Sbjct 857 CATCGAAGCCTGAAAGATTGGAAGAGAATTTTCAGGTTTTCGACTTCCAACTATCGAAAG 916
Query 898 AGGACATGGAAGTGATCAAGAGCATGGACAGGAAATACCGCACGCACCAAACAGCCAAGT 957
||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||
Sbjct 917 AGGACATGGAAGTGATCAAAAGCATGGAGAGGAATTACCGCACGCACCAAACAGCCAAGT 976
Query 958 TTTGGGGCATTGAGCTCTACGCTTGATcacacacacacacacTCTC 1003
|||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 977 TTTGGGGCATTGAGCTCTACGCTTGATCACACACACACTCTCTCTC 1022
> AT2G21250.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily
protein | chr2:9103207-9105187 REVERSE LENGTH=1202
Length=1202
Score = 1432 bits (775), Expect = 0.0
Identities = 922/993 (93%), Gaps = 9/993 (1%)
Strand=Plus/Plus
Query 1 CTGAGCAGATATTTACCCAATCAGGGGTTGAGGAAGAGAAGCA-AGAAGCAGAAATGGAG 59
|||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||||
Sbjct 20 CTGAGCAGATATTTACCCAATCAGGGATTCAGGAAGAGAAGCAGAGAA--AGAAATGGAG 77
Query 60 ATAACACTGAACAATGGTTTCAAGATGCCGATCGTCGGCTTAGGAGTGTGGAGAATGGAG 119
||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 78 ATAACACTGAACAGTGGCTTCAAGATGCCGATCGTCGGCTTAGGAGTATGGAGAATGGAG 137
Query 120 AAAGAAGAGATTCGAGACCTTATCATCAGTGCCATCAAGAAT-GGCTATCGCCATCTCGA 178
|| |||| |||||||||||||||| ||| |||||||||| || |||||||||||||||||
Sbjct 138 AAGGAAGGGATTCGAGACCTTATCCTCAATGCCATCAAG-ATCGGCTATCGCCATCTCGA 196
Query 179 CTGTGCTGGTAATTATAAGAACGAAG-CTGAAGTTGGTGAGGCGCTTACAGAAGCATTCA 237
|||||||| | |||||| ||| | || | ||||||||||| || ||||||||||||||||
Sbjct 197 CTGTGCTGCTGATTATAGGAATG-AGACCGAAGTTGGTGATGCTCTTACAGAAGCATTCA 255
Query 238 AGACGGGTCTGGTCAAGAGGGAGGATCTCTTCATTACTACCAAGCTATGGAATTCTGACC 297
|||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 256 AGACTGGTCTGGTTAAGAGGGAGGATCTCTTCATTACAACCAAGCTATGGAATTCAGACC 315
Query 298 ATGGCCATGTTATTGAGGCGTGCAAAGACAGTCTCAAGAAACTTCAACTTGATTACCTCG 357
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 316 ATGGCCATGTCATTGAGGCCTGCAAAGACAGTCTCAAGAAACTTCAACTTGATTACCTCG 375
Query 358 ACCTTTTCCTCGTTCATTTACCCGTAGCAACGAAACACACGGGAGTAGGAACAACCGATA 417
| || |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 376 ATCTCTTCCTCGTTCATTTTCCCGTAGCAACGAAACACACCGGAGTAGGGACAACCGATA 435
Query 418 GTGCTTTGGGCGATGACGGGGTATTGGACATAGACACAACAATCTCTCTGGAAACTACAT 477
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 436 GTGCTTTGGGCGATGACGGGGTATTGGACATAGACACGACCATCTCTCTGGAAACTACAT 495
Query 478 GGCACGACATGGAAAAGCTTGTTT-TCATGGGTTTGGTCCGCAGCATTGGACTCAGTAAC 536
|||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||||||
Sbjct 496 GGCACGACATGGAAAAGCTTGTTTCT-ATGGGTTTAGTCCGCAGCATTGGAATCAGTAAC 554
Query 537 TGTGATGTCTTTCTAACGAGAGATTGCTTGGCTTACTCCAAGATCAAGCCTGCAGTGAAT 596
| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 555 TATGATGTCTTTCTAACGAGAGATTGCTTGGCTTACTCCAAGATCAAACCTGCTGTGAAT 614
Query 597 CAGATAGAGACACACCCTTACTTCCAACGCGATTCTCTTGTCAAGTTTTGCCAGAAACAC 656
||||| |||||||| |||||||||||||| |||||||||||||| || |||||||||||
Sbjct 615 CAGATCGAGACACATCCTTACTTCCAACGTGATTCTCTTGTCAAATTCTGCCAGAAACAT 674
Query 657 GGTATCTGTGTCACCGCTCATACTCCCCTCGGAGGTGCCACAGCCAATGCCGAATGGTTT 716
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 675 GGTATCTGTGTCACTGCTCATACTCCTCTCGGAGGTGCCACAGCCAATGCCGAGTGGTTT 734
Query 717 GGCTCTGTGTCATGCCTGGATGACCCAGTTCTCAAAGATGTGGCGGAGAAGTACAAAAAG 776
||| | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 735 GGCACCGTGTCATGCCTGGATGATCCAGTTCTCAAAGATGTGGCCGAGAAGTACAAAAAG 794
Query 777 ACAGTGGCACAGGTTGTCCTGAGGTGGGGAATTCAGAGAAACACAGTGGTGATACCAAAG 836
||||||||||| |||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct 795 ACAGTGGCACAAGTTGTCCTGAGGTGGGGAATCCAGAGAAAAACGGTGGTGATACCAAAG 854
Query 837 ACATCAAAGCCTGCAAGATTGGAAGAGAATTTTCAAGTTTTCGACTTCGAACTATCAAAA 896
|||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 855 ACATCAAAGCCTGCGAGATTGGAAGAGAACTTTCAGGTTTTCGACTTCGAACTATCGAAA 914
Query 897 GAGGACATGGAAGTGATCAAGAGCATGGACAGGAAATACCGCACGCACCAAACAGCCAAG 956
|||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||
Sbjct 915 GAGGACATGGAAGTGATCAAAAGCATGGAGAGGAAATACCGCACGAACCAACCAGCCAAG 974
Query 957 TTTTGGGGCATTGAGCTCTACGCTTGATcacac 989
|||||| |||||| ||||||||||||||||||
Sbjct 975 TTTTGGAACATTGATCTCTACGCTTGATCACAC 1007
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49128995766
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5