BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481007
Length=2635
Score E
Sequences producing significant alignments: (Bits) Value
AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr... 4183 0.0
AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr... 2774 0.0
> AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr2:9162620-9168452
FORWARD LENGTH=2860
Length=2860
Score = 4183 bits (2265), Expect = 0.0
Identities = 2534/2660 (95%), Gaps = 33/2660 (1%)
Strand=Plus/Plus
Query 1 GAGATCGGAGACATGGCGGAGAGTCAC------GGTGGTGGTTGCTGTCCGCCGATGGAT 54
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 72 GAGATCGGAGACATGGCGGAGAGTCACGGTGGTGGTGGTGGTTGCTGTCCGCCGATGGAT 131
Query 55 CTGATGCGGTCAGAGCCGATGCATCTCGTTCAAGTCATCGTTCCCATGGAATCTGCTCAT 114
|||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 132 CTGATGCGGTCAGAACCGATGCAACTCGTTCAAGTCATTGTTCCCATGGAATCTGCTCAT 191
Query 115 CTTACCGTCTCTTATCTTGGCGATCTTGGCCTCGTCCAGTTCAAAGATCTTAATTCTGAC 174
||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||
Sbjct 192 CTTACCGTCTCTTATCTCGGCGATCTCGGTCTCGTCCAGTTCAAAGATCTTAATTCTGAG 251
Query 175 AAGAGCCCATTTCAACGCACTTACGCTGCTCAGATTAAAAGATGTGGAGAGATGGCACGG 234
||||||||||||||| | ||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 252 AAGAGCCCATTTCAAAGGACTTATGCTGCTCAGATAAAAAGATGTGGGGAAATGGCACGA 311
Query 235 AAGCTACGTTTCTTCAAAGAGCAAATGTCAAAGGCTGGAGTTACTCCCAAAGAGACCATA 294
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 312 AAAATACGTTTCTTTAAAGAGCAAATGTCAAAGGCTGGAGTTACTCCCAAAGAGACCCTA 371
Query 295 GATGA-AGATATTGATATTGATTTGGATGATGTAGAGGTAAAGCTTGGAGAGCTAGAAGC 353
||| | ||| | ||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 372 GAT-AGAGAAAATGATATTGATTTGGATGATGTAGAGGTAAAGCTTGAAGAGCTTGAAGC 430
Query 354 TGAACTTGTTGAAATCAATGCTAATAATGACAAGTTGCAGCGCTCTTATAATGAACTTGT 413
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 431 TGAACTTGTTGAAATCAATGCTAATAACGACAAGTTGCAGCGGTCTTATAATGAACTTGT 490
Query 414 GGAGTACAAGCTCGTTCTTGAGAAGGCTGGTGAGTTTTTTGCTTCAGCCCATAGAAGTGC 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 491 GGAGTACAAGCTCGTTCTTGAGAAGGCTGGTGAGTTTTTTGCTTCAGCCCATAGAAGTGC 550
Query 474 TAACGCTCAACGGAGTGAGATAGAAACAGAACAAGTGGATGAAGACCTCCTGGAGGCTCC 533
|| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 551 TACCGCTCAACAGAGTGAGATAGAAACAGAACAAGTGGGTGAAGACCTCCTGGAGGCTCC 610
Query 534 TTTGTTGCAGGAAGAAAAGTCTGTTGATCCAACAAAGCAAGTAAAGCTTGGATTCCTCAC 593
| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 611 TCTGTTGCAGGAAGAGAAGTCTGTTGATCCCACAAAGCAAGTAAAGCTTGGATTCCTCAC 670
Query 594 TGGGCTAGTGCCTCGTGAAAAGTCTATGGTGTTCGAGAGGATCCTATTTCGTGCAACTAG 653
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 TGGACTAGTGCCTCGTGAAAAGTCTATGGTGTTCGAGAGGATCCTATTTCGTGCAACTAG 730
Query 654 GGGCAACATCTTCATACGACAGTCTGTCATCGAGGAGTCCGTTGTTGATCCCAACTCTGG 713
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 731 GGGCAACATCTTCATACGACAGTCTGTCATTGAGGAGTCTGTTGTTGATCCCAACTCTGG 790
Query 714 GGAGAAGGCTGAGAAAAATGTATTTGTTGTCTTCTATTCTGGGGAAAGAGCAAAAAGCAA 773
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 791 GGAGAAGGCTGAGAAAAATGTATTTGTCGTCTTCTATTCTGGGGAAAGAGCAAAAAGCAA 850
Query 774 AATTCTTAAGATATGTGAAGCTTTTGGGGCCAATCGCTATCCTTTCAGCGAAGACCTGGG 833
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 851 AATTCTTAAGATATGTGAAGCTTTTGGGGCCAATCGCTATCCTTTCAGTGAAGATCTGGG 910
Query 834 GAAGCAAGCTCAAATGATGACTGAGGTTTCAGGTCGGTTATCAGAGCTTAAAACTACCAT 893
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 911 CAAACAAGCTCAAATGATGACTGAGGTTTCAGGTCGGTTATCAGAGCTTAAAACTACCAT 970
Query 894 AGGTGCTGGGTTGGATCACCGCAACATTCTTTTGGAGACCATTGGAGATAAATTTGAGCA 953
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 971 AGGTGCTGGGTTGGATCAGCGCAACATTCTTTTAGAGACCATTGGAGATAAGTTTGAGCA 1030
Query 954 ATGGAACCTCAAGGTTCGCAAAGAAAAAGCAATCTATCACACCTTGAACATGCTTAGTCT 1013
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1031 ATGGAACCTCAAGATTCGCAAAGAAAAAGCTATCTATCACACCTTGAACATGCTTAGTCT 1090
Query 1014 AGATGTGACTAAGAAGTGCCTTGTGGGTGAAGGCTGGAGTCCTGTCTTTGCAGCAACAGA 1073
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1091 TGATGTGACTAAGAAGTGCCTTGTGGGTGAAGGCTGGAGTCCTGTCTTTGCAGCAACAGA 1150
Query 1074 AGTTCAAGATGCATTGCAGCGTGCCGCGGTTGACTCCAATTCTCAAGTTGGATCAATTTT 1133
| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1151 AATTCAAGATGCATTGCATCGTGCTGCGGTTGACTCCAATTCTCAAGTTGGATCAATTTT 1210
Query 1134 CCAAGTCCTGAGGACCAAAGAGATGCCTCCAACTTTTTTCCGCACAAACAAATTTACTAC 1193
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1211 CCAAGTCCTGAGGACCAAAGAGATGCCTCCGACTTTTTTCCGCACAAACAAATTTACTAC 1270
Query 1194 TGCTTTCCAGGAAATTGTTGATGCATACGGTGTGGCCAAATATCAGGAGGCCAATCCTAG 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 TGCTTTCCAGGAAATTGTTGATGCATACGGTGTGGCCAAATATCAGGAGGCCAATCCTAG 1330
Query 1254 TGTATTCACAATTGTTACCTTCCCCTTCCTGTTTGCTGTTATGTTTGGTGACTGGGGTCA 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 TGTATTCACAATTGTTACCTTCCCCTTCCTGTTTGCTGTTATGTTTGGTGACTGGGGTCA 1390
Query 1314 TGGAATCTGCCTGCTGCTTGCAACCATGTATTTAATATTGAGAGAAAAGAAACTTTCCAG 1373
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1391 TGGAATCTGCCTGCTGCTTGCAACTATGTATTTAATATTGAGAGAAAAGAAACTTTCCAG 1450
Query 1374 CCAGAAACTCGGGGATATTATGGAAATGGCTTTTGGTGGCCGTTACGTTATTTTTATGAT 1433
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1451 CCAGAAACTTGGGGATATTATGGAAATGGCTTTTGGTGGCCGTTACGTTATTTTTATGAT 1510
Query 1434 GTCACTCTTCTCAATATACACTGGTTTAATCTACAACGAGTTCTTCTCTATACCATTTCC 1493
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1511 GTCACTATTCTCAATATACACTGGTTTAATCTACAACGAGTTCTTCTCTATACCATATCC 1570
Query 1494 ATTGTTTGCTAGCTCAGCATACGAATGCCGTGATGTCTCTTGCAGTGAGGCTACTACAAT 1553
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1571 ATTGTTTGCTAGCTCAGCATACGATTGCCGTGATGTCTCTTGCAGTGAGGCTACTACAAT 1630
Query 1554 TGGTCTGATCAAAACCCGAGACACTTATCCATTTGGCGTGGATCCTGTGTGGAAAGGTAC 1613
|||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||
Sbjct 1631 TGGTCTGATCAAAACCCGAGACACTTATCCATTTGGTGTGGATCCTGTGTGGCATGGTAC 1690
Query 1614 CCGCAGTGAGCTACCATTCCTGAATTCACTTAAGATGAAAATGTCAATTCTTATTGGAGT 1673
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1691 CCGCAGTGAGCTACCATTCCTAAATTCGCTTAAGATGAAAATGTCAATTCTTATTGGAGT 1750
Query 1674 TGCACAAATGAACCTCGGAATCATAATGAGCTTCTTTAATGCAAAATTCTTCAAAAGTGC 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1751 TGCACAAATGAACCTCGGAATCATAATGAGCTTCTTTAATGCAAAATTCTTCAAAAGTGC 1810
Query 1734 TGTAAACGTATGGTTCCAGTTCGTTCCCCAGATGATATTCTTGAACTGCTTGTTTGGCTA 1793
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 TGTAAACATATGGTTCCAGTTCGTTCCCCAGATGATATTCTTGAACTGCTTGTTTGGCTA 1870
Query 1794 TCTTTCGGTCCTCATCATCATAAAGTGGTGCACTGGTTCTCAAGCAGATTTATATCATGT 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1871 TCTTTCGGTCCTCATCATCATAAAGTGGTGCACTGGTTCTCAAGCAGATTTATATCACGT 1930
Query 1854 AATGATCTACATGTTCCTGAGCCCTATGGATGATTTAGGAGAGAATCAGCTTTTCCCTAA 1913
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1931 AATGATCTACATGTTTCTGAGCCCTATGGATGATTTAGGAGAGAATCAGCTGTTCCCTAA 1990
Query 1914 CCAGAAAATAGTACAGCTCACATTCCTCTTTCTGGCTTTGGTTTCTGTTCCGTGGATGTT 1973
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1991 CCAGAAAATAGTACAGCTCACATTCCTCTTTCTGGCTCTGGTTTCTGTGCCGTGGATGTT 2050
Query 1974 GTTGCCAAAGCCATTCATCCTGAAGAAACAACATGAAGCTAGACATCAAGGTCTGTCATA 2033
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2051 GTTGCCAAAGCCATTCATCCTGAAAAAACAACATGAAGCTAGACATCAAGGACTGTCATA 2110
Query 2034 CGCACATCTTGATGAGACAGATGAGAGTCTTCAAGTAGATACAAATGGGGGAGGACATGG 2093
||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2111 TGCACAGCTTGACGAGACAGATGAGAGTCTTCAAGTAGAAACAAATGGGGGAGGACATGG 2170
Query 2094 ACACGAAGAGTTTGAATTCAGCGAAATCTTTGTGCACCAACTCATTCACACCATTGAATT 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2171 ACACGAAGAGTTTGAATTCAGCGAAATCTTTGTGCACCAACTCATTCACACCATTGAGTT 2230
Query 2154 TGTGCTTGGAGCTGTTTCCAACACTGCTTCTTATCTTCGTCTCTGGGCCCTCAGTCTCGC 2213
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2231 TGTGCTTGGAGCTGTTTCCAACACTGCTTCTTATCTTCGTCTCTGGGCTCTCAGTCTCGC 2290
Query 2214 CCACTCGGAGTTGTCGTCAGTCTTCTACGAGAAGGTCCTCCTTATGGCTTGGGGTTTTAA 2273
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 2291 CCACTCGGAGTTGTCGTCAGTCTTCTATGAGAAGGTCCTTCTTATGGCTTGGGGTTTCAA 2350
Query 2274 CAATGTCTTCATCTTGATTATTGGGAT-CTTCGTCTTCATCTTTGCGACTGTGGGAGTGC 2332
|||||||||||||| ||| |||| || || ||||||||| |||||||||||||||||||
Sbjct 2351 CAATGTCTTCATCTGGATCGTTGGAATTCT-CGTCTTCATATTTGCGACTGTGGGAGTGC 2409
Query 2333 TTCTTGTGATGGAGACATTGAGTGCGTTCCTTCACGCGCTGCGTCTTCACTGGGTGGAGT 2392
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 2410 TTCTTGTGATGGAGACATTGAGTGCATTCCTTCACGCGTTGCGTCTTCACTGGGTGGAGT 2469
Query 2393 ACCAGAACAAGTTCTACGAAGGCGATGGTTACAAGTTTGCTCCTTTCACTTTCACTCTCG 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2470 ACCAGAACAAGTTCTACGAAGGCGATGGTTACAAGTTTGCTCCTTTCACTTTCACTCTCG 2529
Query 2453 ACGGAAACGAAGACGAGTGATTGATGTTCCGAA-T-TCCGGAAATGCCTTCTTCTGCGTG 2510
||||||||||||||||||||||||||||||| | || | ||||| |||||||||||||
Sbjct 2530 TCGGAAACGAAGACGAGTGATTGATGTTCCGATGTATCAG-AAATGACTTCTTCTGCGTG 2588
Query 2511 TGCATATGTAAGGTATGGGAAGGAAGGATTCTGAGTTCCTTCTCTAATTAATTTTT-AAA 2569
||||||| |||||||||||||||| |||||||||||||| ||||| | ||||| |||
Sbjct 2589 TGCATATATAAGGTATGGGAAGGA----TTCTGAGTTCCTTCCCTAATCATTTTTTTAAA 2644
Query 2570 --------GAAA-T---TT-GGATGTTTTCTCTTCCCCtttttcttttttAGAAGGCTT- 2615
|||| | || ||||||||| |||||||||||||| || |||||||| ||
Sbjct 2645 AAATTTAAGAAAATAAATTTGGATGTTTTTTCTTCCCCTTTTTCCTTATTAGAAGG-TTA 2703
Query 2616 TATTGAATTTATTTACCTTT 2635
||||||||||||||||||||
Sbjct 2704 TATTGAATTTATTTACCTTT 2723
> AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr4:18209399-18215056
FORWARD LENGTH=2884
Length=2884
Score = 2774 bits (1502), Expect = 0.0
Identities = 2175/2497 (87%), Gaps = 57/2497 (2%)
Strand=Plus/Plus
Query 13 ATGGCGGAGAGTCACGGT---GGTGGTTGCTGTCCGCCGATGGATCTGATGCGGTCAGAG 69
|||||||| ||| |||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct 115 ATGGCGGAAAGTGGCGGTGGCGGTGGCTGTTGTCCGCCGATGGATCTGATGCGTTCAGAG 174
Query 70 CCGATGCATCTCGTTCAAG-TCATCGTTCCCATGGAATCTGCTCATCTTACCGTCTCTTA 128
||||||| || |||| || |||| ||||||||||||||||||||||| |||||||||||
Sbjct 175 ACGATGCAACTTGTTC-AGCTCATTGTTCCCATGGAATCTGCTCATCTCACCGTCTCTTA 233
Query 129 TCTTGGCGATCTTGGCCTCGTCCAGTTCAAAGATCTTAATTCTGACAAGAGCCCATTTCA 188
||||| ||||||||||||||||| |||||||| |||||||| || ||||||||||||||
Sbjct 234 CCTTGGAGATCTTGGCCTCGTCCAATTCAAAGACCTTAATTCAGAGAAGAGCCCATTTCA 293
Query 189 ACGCACTTACGCTGCTCAGATTAAAAGATGTGGAGAGATGGCACGGAAGCTACGTTTCTT 248
||| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 294 ACGTACTTACGCAGCACAGATTAAAAGATGTGGAGAAATGGCACGGAAAATACGTTTCTT 353
Query 249 CAAAGAGCAAATGTCAAAGGCTGGAGTTACTCCCAAAGAGA-CCATAGATG-AAGATATT 306
|| || ||||||||||| || |||||| | |||| || | || || | |||| | |
Sbjct 354 CAGGGATCAAATGTCAAAAGCAGGAGTTCCAGCCAAGGAAATGCA-AG-GGAAAGAAAAT 411
Query 307 GATATTGATTTGGATGATGTAGAGGTAAAGCTTGGAGAGCTAGAAGCTGAACTTGTTGAA 366
|| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 412 GACATTGACTTGGATGATGTTGAGGTAAAGCTTGGAGAGCTAGAAGCTGAACTTGTTGAA 471
Query 367 ATCAATGCTAATAATGACAAGTTGCAGCGCTCTTATAATGAACTTGTGGAGTACAAGCTC 426
|||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |
Sbjct 472 ATCAATGCTAATAATGACAAGTTGCAGCGCTCCTATAATGAGCTTATGGAGTACAAGTTG 531
Query 427 GTTCTTGAGAAGGCTGGTGAGTT-TTTTGCTTCAGCCCATAGAAGTGCTA-ACGCTCAAC 484
|||||| |||||||||||||||| |||| |||| || ||||||||||| | | |||||
Sbjct 532 GTTCTTCAGAAGGCTGGTGAGTTCTTTT-CTTCTGCTCATAGAAGTGCCGCA-GATCAAC 589
Query 485 GGAGTGAGATAGAAACAGAACAAGTGGATGAAGACCTCCTGGAGGCTCCTTTGTTGCAGG 544
||| |||| |||| || |||||| || |||||| || |||||| |||||||||| ||||
Sbjct 590 AGAGAGAGACAGAATCACAACAAGCGGGTGAAGATCTGCTGGAGTCTCCTTTGTTACAGG 649
Query 545 AAGAAAAGTCTGTTGATCCAACAAAGCAAGTAAAGCTTGGATTCCTCACTGGGCTAGTGC 604
|||| ||||| ||||| | ||||||||||||||||||||||| || || || ||||||
Sbjct 650 AAGAGAAGTCCATTGATTCGACAAAGCAAGTAAAGCTTGGATTTCTTACCGGATTAGTGC 709
Query 605 CTCGTGAAAAGTCTATGGTGTTCGAGAGGATCCTATTTCGTGCAACTAGGGGCAACATCT 664
||||||||||||||||||| || |||||||| || || ||||| || ||||||||||| |
Sbjct 710 CTCGTGAAAAGTCTATGGTCTTTGAGAGGATTCTGTTCCGTGCGACCAGGGGCAACATTT 769
Query 665 TCATACGACAGTCTGTCATCGAGGAGTCC-GTTGTTGATCCCAACTCTGGGGAGAAGGCT 723
| || |||||| ||||||| |||||| || || ||||||||||||||||||||||||||
Sbjct 770 TTATCCGACAGACTGTCATTGAGGAG-CCAGTCATTGATCCCAACTCTGGGGAGAAGGCT 828
Query 724 GAGAAAAATGTATTTGTTGTCTTCTATTCTGGGGAAAGAGCAAAAAGCAAAATTCTTAAG 783
||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 829 GAGAAAAATGTTTTTGTTGTCTTCTATTCCGGGGAAAGAGCGAAAAGCAAAATTCTGAAA 888
Query 784 ATATGTGAAGCTTTTGGGGCCAATCGCTATCCTTTCAGCGAAGACCTGGGGAAG-CAAGC 842
|||||||||||||||||||||||||| ||||||||||| || ||||| || ||| |||||
Sbjct 889 ATATGTGAAGCTTTTGGGGCCAATCGTTATCCTTTCAGTGAGGACCTTGG-AAGACAAGC 947
Query 843 TCAAATGATGACTGAGGTTTCAGGTCGGTTATCAGAGCTTAAAACTACCATAGGTGCTGG 902
||| ||||| || |||||||| ||||| ||||| ||||||||||| || |||| ||||||
Sbjct 948 TCAGATGATAACCGAGGTTTCTGGTCGATTATCCGAGCTTAAAACCACGATAGATGCTGG 1007
Query 903 GTT-GGATCACCGCAACATTCTTTTGGAGACCATTGGAGATAAATTTGAGCAATGGAACC 961
||| || ||| || |||||||||||| |||||||||||||||| ||||| | ||||||||
Sbjct 1008 GTTAGG-TCAGCGTAACATTCTTTTGCAGACCATTGGAGATAAGTTTGAACTATGGAACC 1066
Query 962 TCAAGGTTCGCAAAGAAAAAGCAATCTATCACACCTTGAACATGCTTAGTCTAGATGTGA 1021
||||||| |||||||| ||||| |||||||| || ||||||||||||||||| |||||||
Sbjct 1067 TCAAGGTACGCAAAGAGAAAGCTATCTATCATACATTGAACATGCTTAGTCTTGATGTGA 1126
Query 1022 CTAAGAAGTGCCTTGTGGGTGAAGGCTGGAGTCCTGTCTTTGCAGCAACAGAAGTTCAAG 1081
| ||||||||||| |||| || ||||||||||||||||||||| ||| |||| ||||||
Sbjct 1127 CGAAGAAGTGCCTCGTGGCCGAGGGCTGGAGTCCTGTCTTTGCATCAAGAGAAATTCAAG 1186
Query 1082 ATGCATTGCAGCGTGCCGCGGTTGACTCCAATTCTCAAGTTGGATCAATTTTCCAAGTCC 1141
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1187 ATGCATTACAGCGTGCCGCCGTTGACTCCAATTCTCAAGTTGGATCAATTTTCCAGGTCC 1246
Query 1142 TGAGGACCAAAGAGAT-GCCTCCAACTT-TTTTCCGCACAAACAAATTTACTACTGCTTT 1199
| || ||||||||| | ||| ||||||| ||||| ||||||||||||||||| |||| |
Sbjct 1247 TAAGAACCAAAGAG-TCGCCACCAACTTATTTTC-GCACAAACAAATTTACTTCTGCAAT 1304
Query 1200 CCAGGAAATTGTTGATGCATACGGTGTGGCCAAATATCAGGAGGCCAATCCTAG-TGTAT 1258
|||||||||||||||||| || ||||||||||| |||||||| |||||||| || |||||
Sbjct 1305 CCAGGAAATTGTTGATGCGTATGGTGTGGCCAAGTATCAGGAAGCCAATCC-AGGTGTAT 1363
Query 1259 TCACAATTGTTACCTTCCCCTTCCTGTTT-GCTGTTATGTTTGGTGACTGGGGTCATGGA 1317
|||| |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||
Sbjct 1364 TCACCATTGTTACCTTCCCCTTCCT-TTTCGCTGTTATGTTTGGTGATTGGGGGCATGGA 1422
Query 1318 ATCTGCCTGCTGCTTGCAACCATGTATTTAATATTGAGAGAAAAGAAACTTTCCAGCCAG 1377
|| ||| | ||||||||||| ||||| || ||||||| ||||||||||||| ||||||||
Sbjct 1423 ATATGCATTCTGCTTGCAACTATGTACTTGATATTGAAAGAAAAGAAACTTGCCAGCCAG 1482
Query 1378 AAACTCGGGGATATTATGGAAATGGCTTTTGGTGGCCGTTACGTTATTTTTATGATGTCA 1437
||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||||||||
Sbjct 1483 AAACTTGGGGATATTATGGAAATGGCTTTTGGTGGGCGTTATGTCATTTTGATGATGTCA 1542
Query 1438 CTCTTCTCAATATACACTGGTTTAATCTACAACGAGTTCTTCTCTATACCATTTCCATTG 1497
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1543 CTCTTCTCAATATACACTGGATTAATCTACAACGAGTTCTTCTCTATACCATTCCCATTG 1602
Query 1498 TTTGCTAGCT-CAGCATACGAATGCCGTGATGTCTCTTGCAGTGAGGCTACTACAATTGG 1556
|||||| || |||| || || ||||| |||||||||||||| || ||||| ||||||||
Sbjct 1603 TTTGCTC-CTTCAGCGTATGATTGCCGGGATGTCTCTTGCAGCGAAGCTACAACAATTGG 1661
Query 1557 TCTGATCAAAACCC-GAGACACTTATCCATTTGG-CGTGGATCCTGTGTGGAAAGG-TAC 1613
| |||| ||| | ||||||||||||||||||| | | |||||||||||| | || | |
Sbjct 1662 TTTGAT-AAAGGTCAGAGACACTTATCCATTTGGTC-TAGATCCTGTGTGGCATGGAT-C 1718
Query 1614 CCGCAGTGAGCTACCATTCCTGAATTCACTTAAGATGAAAATGTCAATTCTTATTGGAGT 1673
|||||||||||| ||||||||||| || || ||||||||||||||||| ||| | |||||
Sbjct 1719 CCGCAGTGAGCTGCCATTCCTGAACTCGCTGAAGATGAAAATGTCAATCCTTCTCGGAGT 1778
Query 1674 TGCACAAATGAACCTCGGAATCATAATGAGCTTCTTTAATGCAAAATTCTTCAAA--AGT 1731
| | |||||||||||||||||||||||||||| ||||||||| | |||||||||| |
Sbjct 1779 TTCTCAAATGAACCTCGGAATCATAATGAGCTACTTTAATGCTAGATTCTTCAAATCAA- 1837
Query 1732 GCTGTAAACGTATGGTTCCAGTTCGTTCCCCAGATGATATTCTTGAACTGCTTGTTTGGC 1791
| |||||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||
Sbjct 1838 G-TGTAAATATATGGTTCCAGTTCATTCCCCAAATGATATTCTTGAACAGCTTGTTTGGC 1896
Query 1792 TATCTTTCGGTCCTCATCATCATAAAGTGGTGCACTGGTTCTCAAGCAGATTTATATCAT 1851
||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1897 TATCTCTCAGTCCTCATCATCATAAAGTGGTGCACTGGTTCTCAAGCAGATTTGTATCAT 1956
Query 1852 GTAATGATCTACATGTTCCTGAGCCCTATGGATGATTTAGGAGAGAATCAGCTTTTCCCT 1911
|||||||| || |||||||||||||| ||||| || |||||||||||||| || ||||||
Sbjct 1957 GTAATGATATATATGTTCCTGAGCCCAATGGACGAGTTAGGAGAGAATCAACTGTTCCCT 2016
Query 1912 AACCAGAAAATAGTACAGCTCA--CATTCCTCTTTCTGGCT-TTGGTTTCTGTTCCGTGG 1968
||||||||| | ||||||| | ||| ||||||||||| ||| |||||||||||||
Sbjct 2017 CACCAGAAAACATTACAGCTTGTGC-TTC-TCTTTCTGGCTCTTG-TTTCTGTTCCGTGT 2073
Query 1969 ATGTTG-TTGCCAAAGCCATTCATCCTGAAGAAACAACATGAAGCTAGACATCAAGGTCT 2027
|||||| || |||||||| |||||| |||||||||||||||||||||| |||||||| |
Sbjct 2074 ATGTTGCTT-CCAAAGCCGTTCATCTTGAAGAAACAACATGAAGCTAGGCATCAAGGCCA 2132
Query 2028 GTCATACGCACATCTTGATGAGACAGATGAGAGTCTTCAAGTAGATACAAATGGGGGAGG 2087
| | ||||||| |||||| |||||||||||||||||||| ||||| ||||| || |||||
Sbjct 2133 GGCGTACGCACCTCTTGACGAGACAGATGAGAGTCTTCATGTAGAGACAAACGGAGGAGG 2192
Query 2088 A-C--ATGGACACGAAGAGTTTGAATTCAGCGAAATCTTTGTGCACCAACTCATTCACAC 2144
| | |||| || || ||||||||||||||||| || |||||||| || || ||||||||
Sbjct 2193 ATCCCATGGGCATGAGGAGTTTGAATTCAGCGAGATATTTGTGCATCAGCTGATTCACAC 2252
Query 2145 CATTGAATTTGTGCTTGGAGCTGTTTCCAACACTGCTTCTTATCTTCGTCTCTGGGCCCT 2204
||| || |||||||||||||||||||||||||| |||||||| || ||||| ||||| ||
Sbjct 2253 CATAGAGTTTGTGCTTGGAGCTGTTTCCAACACCGCTTCTTACCTGCGTCTATGGGCTCT 2312
Query 2205 CAGTCTCGCCCACTCGGAGTTGTCGTCAGTCTTCTACGAGAAGGTCCTCCTTATGGCTTG 2264
|||||| |||||||||||| |||| ||||||||||| ||||||||||||||| | |||||
Sbjct 2313 CAGTCTTGCCCACTCGGAGCTGTCATCAGTCTTCTATGAGAAGGTCCTCCTTCTCGCTTG 2372
Query 2265 GGGTTTTAACAATGTC-TTCATCTTGATTATTGGGATCTTCGTCTTCATCTTTGCGACTG 2323
||||| |||||| | || ||| |||| ||||| |||| || ||||| || || || |
Sbjct 2373 GGGTTACAACAATC-CGTTGATCCTGATCGTTGGGGTCTTGGTGTTCATATTCGCAACCG 2431
Query 2324 TGGGAGTGCTT-CTTGTGATGGAGACATTGAGTGCGTTCCTTCACGCGCTGCGTCTTCAC 2382
||||||| || || |||||||||||| | || |||||||||||||||||||||||||||
Sbjct 2432 TGGGAGTT-TTGCTGGTGATGGAGACACTAAGCGCGTTCCTTCACGCGCTGCGTCTTCAC 2490
Query 2383 TGGGTGGAGTACCAGAACAAGTTCTACGAAGGCGATGGTTACAAGTTTGCTCCTTTCACT 2442
||||| |||| |||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct 2491 TGGGTTGAGTTTCAGAACAAATTCTACGAAGGAGATGGTTACAAGTTCGCTCCTTTCACT 2550
Query 2443 TTCACTCTCGACGG-AAACGAAGACGAGTGAT-TGAT 2477
|||| | || |||| ||||||||||||||||| ||||
Sbjct 2551 TTCATTTTC-ACGGCAAACGAAGACGAGTGATGTGAT 2586
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130835387344
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5