BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481012
Length=2387
Score E
Sequences producing significant alignments: (Bits) Value
AT2G21470.2 | Symbols: SAE2, ATSAE2, EMB2764 | SUMO-activating ... 1683 0.0
> AT2G21470.2 | Symbols: SAE2, ATSAE2, EMB2764 | SUMO-activating
enzyme 2 | chr2:9198594-9202450 FORWARD LENGTH=2575
Length=2575
Score = 1683 bits (911), Expect = 0.0
Identities = 982/1017 (97%), Gaps = 2/1017 (0%)
Strand=Plus/Plus
Query 736 TTCTAACATTGAAGCGGCTTTGTCCAATGAAGAGACATGGAAAAATCGCAGGCGGCCAAG 795
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 881 TTCTAACATTGAAGCGGCTTTGTCCAATGAAGAGACATGGAAAAATCGCAGACGACCAAG 940
Query 796 GCCTATATACAGTAAGGATGTCTTGCCTGAAAGTCTGACTCAACAAAATGGAAGCACTCA 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 941 GCCTATATACAGTAAGGATGTCTTGCCTGAAAGTCTGACTCAACAAAATGGAAGCACTCA 1000
Query 856 GAATTGTTCTGTTACTGATGGCGATTCGATGGTTTCTGTCATGCCGTCGCTTGGCCTGAA 915
||||||||||||||||||||| |||| ||||| |||| |||||| ||||||||||||||
Sbjct 1001 GAATTGTTCTGTTACTGATGGTGATTTAATGGTCTCTGCCATGCCATCGCTTGGCCTGAA 1060
Query 916 GAATCCACAGGAATTGTGGGGTCTAACGCAGAATTCTCTAGTGTTCATAGAAGCATTGAA 975
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1061 GAATCCACAGGAATTGTGGGGTCTAACGCAGAATTCTCTTGTGTTCATAGAAGCATTGAA 1120
Query 976 GTTGTTCTTCGCCAAGAGAAAGAAGGAAATAGGACACCTTACTTTTGACAAAGATGATCA 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 GTTGTTCTTCGCCAAGAGAAAGAAGGAAATAGGACACCTTACTTTTGACAAAGATGATCA 1180
Query 1036 GTTAGCTGTAGAATTTGTTACTGCTGCTGCAAATATCCGTGCTGAGTCTTTCGGAATTCC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 GTTAGCTGTAGAATTTGTTACTGCTGCTGCAAATATCCGTGCTGAGTCTTTCGGAATTCC 1240
Query 1096 TTTGCACAGCCTCTTTGAAGCGAAAGGTATTGCTGGAAACATTGTTCATGCTGTTGCTAC 1155
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241 TTTGCACAGCCTTTTTGAAGCGAAAGGTATTGCTGGAAACATTGTTCATGCTGTTGCTAC 1300
Query 1156 GACCAACGCCATTATTGCCGGTTTGATTGTTATTGAAGCAATCAAAGTGCTGAAAAAGGA 1215
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1301 GACCAACGCCATTATTGCTGGTTTAATTGTCATTGAAGCAATCAAAGTGCTGAAAAAGGA 1360
Query 1216 TGTGGACAAGTTCAGAATGACATATTGCTTAGAACACCCAAGCAAAAAGCTGCTGCTTAT 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361 TGTGGACAAGTTCAGAATGACATATTGCTTAGAACACCCAAGCAAAAAGCTGCTGCTTAT 1420
Query 1276 GCCAATCGAGCCATATGAACCTAATCCCGCTTGCTATGTCTGTTCTAAGACCCCTTTAGT 1335
||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct 1421 GCCAATCGAGCCATATGAACCTAATCCTGCTTGCTATGTCTGTTCCGAGACCCCATTAGT 1480
Query 1336 ACTTGAGATCAATACTCGGAAATCGAAACTACGGGATCTAGTTGATAAAATTGTCAAAGC 1395
||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct 1481 ACTCGAGATCAATACTCGGAAATCAAAACTACGGGATCTAGTTGATAAAATTGTGAAAAC 1540
Query 1396 CAAGCTTGGAATGAACCTACCGTTGATTATGCACGGGAATTCGCTTCTGTATGAAGTTGG 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 CAAGCTTGGAATGAACCTACCGTTGATTATGCACGGGAATTCGCTTCTGTATGAAGTTGG 1600
Query 1456 CGATGATCTTGATGATATTATGGTTGCAAACTACAACGCTAATCTCGAGAAGTATTTATC 1515
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1601 CGATGATCTTGATGATATTATGGTTGCAAACTACAACGCTAATCTTGAGAAGTATCTATC 1660
Query 1516 AGAACTTCCTTCTCCCATTCTCAACGGAAGCATTCTCACAGTCGAAGATCTTCAACAAGA 1575
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1661 AGAACTTCCTTCTCCCATTCTTAACGGAAGCATTCTCACAGTCGAAGATCTTCAACAAGA 1720
Query 1576 GCTATCTTGCAAGATAAATGTCAAGCACAGGTTTTATTCTGAAATTTTGAATCCTGTTTC 1635
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1721 GCTATCTTGCAAGATAAATGTCAAGCACAGGTTTTTTTCTGAAATTTTGAATCCTGTTTT 1780
Query 1636 AAATTCAGTTTGGTTTCTGATAATATTACCATCGACTTTCCCTAAACTTTTCCATTTCA- 1694
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1781 AAATTCAGTTTGGTTTCTGATTATATTACCATCGACTTTCCCTAAACTCTTCCATTTCAC 1840
Query 1695 TCAAATCACGAAACCAAGATGAGTTATCATCAGACATTATCCTAGGATTCTCAAATG 1751
| || |||||||| ||||||| |||||||| |||||| |||||||||||||||||||
Sbjct 1841 TGAA-TCACGAAATCAAGATGGGTTATCATTAGACATCATCCTAGGATTCTCAAATG 1896
Score = 1264 bits (684), Expect = 0.0
Identities = 719/736 (98%), Gaps = 1/736 (0%)
Strand=Plus/Plus
Query 1 CTGAACCGTCGCTTAACCTATTGCTCCGTCTTTTCAC-TTCTCCGCCATGGCTACCCAAC 59
||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 112 CTGAATCGTCGTTTAACGTATTGCTCCGTCTTTTCACTTTCTCCGCCATGGCTACGCAAC 171
Query 60 AACAGCAATCCGCCATTAAAGGCGCGAAAGTGCTTATGGTTGGAGCTGGTGGGATTGGTT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 AACAGCAATCCGCCATTAAAGGCGCGAAAGTGCTTATGGTTGGAGCTGGTGGGATTGGTT 231
Query 120 GCGAGTTACTGAAGACTCTTGCTCTTTCTGGATTCGAAGACATTCATATTATTGACATGG 179
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 232 GCGAGTTACTTAAGACTCTTGCTCTTTCTGGATTCGAGGACATTCATATTATTGACATGG 291
Query 180 ACACTATTGAAGTCAGTAACCTGAATAGGCAATTTCTATTCCGTCGTTGTCATGTTGGGC 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 292 ACACTATTGAAGTCAGTAACCTGAATAGGCAATTTCTATTCCGTCGTTCTCATGTTGGGC 351
Query 240 AGTCCAAGGCTAAGGTTGCCAGAGATGCAGTATTGAGATTTAGGCCTCACATTAATATAA 299
|||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 352 AGTCTAAGGCTAAGGTTGCCAGAGATGCAGTCTTGAGATTTAGGCCTAACATTAATATAA 411
Query 300 GATCATACCATGCAAATGTGAAGAATCCCGAGTTTGATGTTGATTTTTTCAAGCAATTTG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 GATCATACCATGCAAATGTGAAGAATCCCGAGTTTGATGTTGATTTTTTCAAGCAATTTG 471
Query 360 ATGTTGTTCTGAATGGGCTGGACAACTTGGATGCAAGGCGTCATGTGAATCGCCTTTGTC 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 472 ATGTTGTTCTGAATGGGCTGGACAACTTGGACGCAAGGCGTCATGTGAATCGCCTTTGTC 531
Query 420 TTGCAGCTGATGTTCCTCTTGTAGAAAGTGGGACAACGGGCTTCCTAGGACAGGTAACTG 479
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 532 TTGCAGCTGATGTTCCTCTTGTAGAAAGTGGGACAACGGGCTTCCTTGGACAGGTAACTG 591
Query 480 TGCATATAAAGGGGAAAACAGAATGTTATGAGTGCCAAACCAAACCTGCTCCAAAGACCT 539
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 592 TGCATATAAAGGGAAAAACAGAATGTTATGAGTGCCAAACCAAACCTGCTCCAAAGACTT 651
Query 540 ATCCTGTGTGTACAATAACCAGCACTCCAACTAAGTTTGTGCACTGTATTGTATGGGCAA 599
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 652 ATCCTGTGTGTACAATAACCAGCACGCCAACTAAGTTTGTGCACTGTATTGTATGGGCAA 711
Query 600 AAGACCTGCTCTTTGCAAAGTTGTTTGGCGACAAGAATCAAGATAATGATCTTAATGTGC 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 AAGACCTGCTCTTTGCAAAGTTGTTTGGCGACAAGAATCAAGATAATGATCTTAATGTGC 771
Query 660 GATCCAACAACTCTGCAAGCTCATCCAAAGAAACAGAAGATGTATTTGAACGTTCAGAAG 719
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 GATCCAACAATTCTGCAAGCTCATCCAAAGAAACAGAAGATGTATTTGAACGTTCAGAAG 831
Query 720 ATGAAGATATTGAGCA 735
||||||||||||||||
Sbjct 832 ATGAAGATATTGAGCA 847
Score = 944 bits (511), Expect = 0.0
Identities = 601/641 (94%), Gaps = 20/641 (3%)
Strand=Plus/Plus
Query 1762 TTTAA-GCATCCTCTACTTATTCTGTTTCTGTCACAGGGAAGAATTTGACGAGGAAAAAG 1820
||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1940 TTTAACGCATCCTTTACTTATTCTG-TTCTGTCACAGGGAAGAATTTGACGAGGAAAAAG 1998
Query 1821 AACCTGAAGGAATGGTACTCTCTGGATGGACA-CAGTCTCCAGCTACCAATGGCGAGAGC 1879
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1999 AACCTGAAGGAATGGTACTCTCTGGATGGACACCA-TCTCCAGCTACCAATGGCGAGAGC 2057
Query 1880 GCATCAACATCAAACAATGAGAACCCCA-TCGATGTCACAGAGAGTTCCTCAGGATCCGA 1938
||||||||||||||||| ||||| |||| | ||||| |||||||||||||||||||||||
Sbjct 2058 GCATCAACATCAAACAACGAGAA-CCCAGTTGATGTTACAGAGAGTTCCTCAGGATCCGA 2116
Query 1939 GACTGCTTCTAAGAAGAGAAAACTCTCCGAGCCCGAGCCCAGTAATCATAAGAAAGAAGC 1998
| |||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||| |
Sbjct 2117 GCCTGCTTCTAAGAAGAGAAGACTCTCTGAGACCGAGGCCAGTAATCATAAGAAAGAAAC 2176
Query 1999 AGAGAACGTCGAGAGTGAAGATGATGATATCATGGAGGTTGAAAATCCCATGATGGTGAG 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2177 AGAGAACGTCGAGAGTGAAGATGATGATATCATGGAGGTTGAAAATCCCATGATGGTGAG 2236
Query 2059 CAAAAAGAAGATAAGAGTTGAATAGGCC--TTTTT-GAAAGATCTGATCCCTAAATCCTT 2115
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 2237 CAAAAAGAAGATAAGAGTTGAATAGGCCCCTTTTTTGAAAGATCTGATCCCTAAATGCTT 2296
Query 2116 GCttt-ttt-t-AGCTTCTCTTTTATTTCGATCTAACTTTCTACTTTCTGAATTTACGCC 2172
||||| ||| | ||||||| ||||| |||||||||||||||||||||||||| ||| |||
Sbjct 2297 GCTTTATTTATTAGCTTCT-TTTTACTTCGATCTAACTTTCTACTTTCTGAAATTATGCC 2355
Query 2173 ACAAGAATTACAA-GTATGATTTAGGGATTCTTTGATGAAGAAGAAA-CTACTCAGATTG 2230
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2356 ACAAGAATTACAAAGTATGATTTAGGGATTCTTTGATGAAGAAGAAAACTACTCAGATTG 2415
Query 2231 TTAAATATTTACTAGGACAGGATCCTTTGGATGAGGAGCTCAGGAACTCATTCTAAGGGA 2290
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2416 TTAAATATTTACTAGGACAGGATCCTTTGGATGAGGAGCTCAGGAACTCATTTTAAGG-A 2474
Query 2291 AGCAATCTTTGCTTTCCAGAGATTC-TGTAATGTTCTCACTAACTGTAAGAGCTCCCTTG 2349
|||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct 2475 AGCAATTTTTGCTTTCCAGAGATTCCTGTTATGTTTTCACTAACTGTAAGAGCTCCCTTG 2534
Query 2350 TATCTTTATTTCT---AGTTATCAAATTTTCTGGGTTTTTT 2387
||||||||||||| ||||||||||||||||| ||||||
Sbjct 2535 TATCTTTATTTCTTCGAGTTATCAAATTTTCTGTTTTTTTT 2575
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118523486745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5