BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481031 Length=2311 Score E Sequences producing significant alignments: (Bits) Value AT2G21630.1 | Symbols: | Sec23/Sec24 protein transport family ... 3653 0.0 > AT2G21630.1 | Symbols: | Sec23/Sec24 protein transport family protein | chr2:9250323-9253915 FORWARD LENGTH=2395 Length=2395 Score = 3653 bits (1978), Expect = 0.0 Identities = 2204/2315 (95%), Gaps = 8/2315 (0%) Strand=Plus/Plus Query 1 TTACTGGAGAGATAAGTCAACCATGGCGGAGTTTGGAGAGCTCGAAGCTCAAGATGGAGT 60 ||||| ||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2 TTACTAGAGAGGTTAGTCAACCATGGCGGAGTTTGGAGAGCTTGAAGCTCAAGATGGAGT 61 Query 61 TAGAATGCCATGGAACATCATCCCCGTCGCAACGAAGAAA-GAACAATCAATCGACTCCG 119 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| Sbjct 62 AAGAATGCCATGGAACATCATCCCCGTCGCAACGAA-AAAGGAACAATCAATCGATTCCG 120 Query 120 AAATTCCAGTTTCCGCCATTTACACACCTCTGAAACCTC-TCGCCGATCATTCTCTTCTC 178 || |||||||||||||||||||||||||||||||||||| | | ||| || |||||| Sbjct 121 AAGTTCCAGTTTCCGCCATTTACACACCTCTGAAACCTCTTAG-ATCTCAATCCCTTCTC 179 Query 179 CTTCCTTACTCTCCTCTCCGTTGCCGGACTTGTCGCTCCGTTCTAAACCCTTACTCCGTC 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 CTTCCTTACTCTCCTCTCCGTTGCCGGACTTGTCGCTCCGTTCTAAACCCTTACTCCGTC 239 Query 239 GTCGATTTCTCCGCCTGTATTTGGGGTTGTCCTTTCTGCTTCAATCGGAATCCTTTCCCG 298 || ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 240 GTAGATTTCTCCGCTTGTAATTGGGGTTGTCCTTTCTGCTTCAATCGGAATCCTTTCCCG 299 Query 299 CGT-AATTACTCTTCAATCGCCGATAACAATCTCCCGCCGGAGCTTTTTCCACATTCCAC 357 | | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 300 C-TAAATTACTCTTCAGTCGCCGATAACAATCTCCCGCCGGAGCTTTTTCCTCATTCCAC 358 Query 358 AACTGTTGAGTATCTTTGTGACTCCTTCTCTTCTCCTTCTCCTCCTGTTTTCCTCTTCGT 417 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 359 AACTGTTGAGTATCTCTGTGATTCCTTCTCTTCTCCTTCTCCTCCTGTTTTCCTCTTCGT 418 Query 418 CGTTGATACTTGCTTGATCTCTGAAGAACTTGATTTCCTCAAATCATCTCTCTTCCAAGC 477 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 419 TGTTGATACTTGTTTGATCTCTGAAGAACTCGATTTCCTCAAATCATCTCTCTTCCAAGC 478 Query 478 T-TTGGATCTTCTTCCTGATACCTCCATCGTCGGTCTCATTACCTTTGATTCATTAGTTC 536 | || |||||||||||||||||||||||| | ||||||||||| |||||||| ||||||| Sbjct 479 TCTT-GATCTTCTTCCTGATACCTCCATCCTTGGTCTCATTACGTTTGATTCGTTAGTTC 537 Query 537 GTGTTTACGAGCTTGGATTCCCACACTGTACCAAATCTTACTTCTTCCATGGAAACAAAG 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 GTGTTTACGAGCTTGGATTCCCACACTGTACCAAATCTTACTTCTTCCATGGAAACAAAG 597 Query 597 ACTGTACTAAAGATCAGCTCTTGGATCAGCTGAGTTTCTTCGTCAAGAACCCTAAACCTT 656 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 598 ACTGTACTAAAGATCAGCTTTTGGATCAGCTGAGTTTCTTCGTCAAGAATCCTAAACCTT 657 Query 657 CTTCAGGTGTCATTGCTGGTGCTAGAGATGGTCTCTCTTCCGACGACATTGCACGGTTTC 716 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 658 CTTCAGGTGTCATTGCTGGTGCTAGAGATGGTCTCTCTTCCGACGACATTGCTCGGTTTC 717 Query 717 TGTTACCGGCCTCCGATTGCCAGTTTACTCTTCACTCTGTTCTTGAGGAGCTGGGAAACA 776 ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 718 TGTTACCTGCCTCTGATTGCCACTTTACTCTTCACTCTGTTCTTGAGGAGCTGGGAAACA 777 Query 777 ATCCCTGGCCCGTTGCACCTGATCACCGCCCTGCGAGATGCACTGGTGTTGCCCTCCGAA 836 |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| | Sbjct 778 GTCCCTGGCCCGTTGCAGCTGATCACCGTCCTGCGAGATGCACTGGTGTTGCTCTCCGTA 837 Query 837 TCGCTGCTGGTCTCTTAGGAGCTTGCTTTCCTGGCTCTGCTGCTCGAATCATGGCTTTTA 896 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 838 TCGCTGCTAGTCTCTTAGGAGCTTGCTTTCCTGGCTCTGCTGCTAGAATCATGGCTTTTA 897 Query 897 TTGGTGGACCTTCCACTGAAGGCCCTGGAGCTATTGTTTCCCAGGAGCTTTCGGATCCAA 956 ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| | Sbjct 898 TTGGTGGACCTTCCACTCAAGGCCCTGGAGCTATTGTTTCTCGGGAGCTTTCGGATCCTA 957 Query 957 TTCGCTCTCATAAGGACATTGATAAAGATTCTGCTACGTATTACCACAATGCTGTCGAGT 1016 |||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||| || | Sbjct 958 TTCGTTCTCATAAGGATATTGATAAAGATTCTGCTATGTATTACCACAAAGCTGTTGAAT 1017 Query 1017 TCTATGAGATGCTTGCAAAACAACTCGTTCATCAAGGTCATGTTCTTGATGTTTTCGCAA 1076 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct 1018 TCTATGAGATGCTTGCGAAACAACTTGTTCATCAAGGTCATGTTCTTGATGTTTTTGCTA 1077 Query 1077 GTTCTGTTGATCAGGTAGGCATTGCTGAGCTCAAAGTTGCAGTTGAGCAGACTGGTGGAT 1136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 GTTCTGTTGATCAGGTAGGCATTGCTGAGCTCAAAGTTGCAGTTGAGCAGACTGGTGGAT 1137 Query 1137 TTGTTGTGCTTGCTGAAAGTTTTGGCCACTCAGTATTTAGGGATTCTCTCAAACGCGTGT 1196 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1138 TTGTCGTGCTTGCTGAAAGTTTTGGCCACTCAGTATTTAGAGATTCTCTCAAACGCGTGT 1197 Query 1197 GTCAGTCAGGTGAAAATGATCTAGGCTTGTCCTCATGTGGTATATTTGAAATTAACTGCT 1256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 GTCAGTCAGGTGAAAATGATCTAGGCTTGTCCTCATGTGGTATATTTGAAATTAACTGCT 1257 Query 1257 CAAAGGATATCAAAGTTCAGGGAATTATTGGCCCTTGCGCATCTCTCGAAAAGAAAGGAC 1316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 CAAAGGATATCAAAGTTCAGGGAATTATTGGCCCTTGCGCATCTCTCGAAAAGAAAGGAC 1317 Query 1317 CGTTGTGCTCTGACACTGCCGTCGGTCAGGGACACACAAGCGCATGGAAGATGTGTGGCC 1376 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1318 CGTTGTGCTCTGACACTGCCATCGGTCAGGGACACACAAGCGCATGGAAGATGTGTGGCC 1377 Query 1377 TTGACAAAAACACTTCAATATGTTTGGTTTTTGAAATTGCTAAAAGGGATACAGCTGATG 1436 | ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1378 TCGACAACAACACTTCCATATGTTTGGTTTTTGAAATTGCTAAAATAGATACAGCTGATG 1437 Query 1437 TTGTTTTGCAGTCGCAGAGCAATCAGTTTTACTTTCAATTTTTAACATACTATCAGCACT 1496 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1438 TTGTTTTGCAGTCGCAGAGCAATCAGTTTTACTTTCAATTTTTGACATACTATCAGCACT 1497 Query 1497 CAAATGGTCAAACAAGACTCCGGGTAACAACTCTTTCAAGAAGATGGGTAATGGGAACTG 1556 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1498 CAAATGGTCAAACAAGACTCCGGGTAACAACTCTTTCTAGAAGATGGGTAATGGGAACTG 1557 Query 1557 AAAGCTTACAGGAGTTGAGCAATGGTTTTGACCAAGAAGCAGCTGCTGTAGTAATGGCAC 1616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 AAAGCTTACAGGAGTTGAGCAATGGTTTTGACCAAGAAGCAGCTGCTGTAGTAATGGCAC 1617 Query 1617 GGCTTATTTCTTTCAAAATGGAGACTCAGCCTGAGTTTAATCCCCAAAGGTGGGTCGATA 1676 | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1618 GACTTATTTCCTCCAAAATGGAGACTCAGCCTGAGTTTAATCCCCAAAGGTGGGTCGATA 1677 Query 1677 AAGCTTTGATAAATATATGCACCTGGTTTGGAGATTACCAGAAAGGCAATCCTTCTTCCT 1736 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1678 AAGCGTTGATAAATCTATGCACCTGGTTTGGAGATTACCAGAAAGGCAATCCTTCTTCCT 1737 Query 1737 TTAGCTTGTCTTCTCAGTTATCAATTTTCCCGCAGTTTGTGTTTCACTTGCGCCGATCTC 1796 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1738 TTAGCTTATCTTCTCAGTTATCAATTTTCCCGCAGTTTGTGTTTCACTTGCGCCGATCTC 1797 Query 1797 AGTTTGTCCAGGTCTTTAACAACAGCCCAGACGAGACAGTATATTTTCGAATGATATTGT 1856 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1798 AGTTTGTCCAGGTCTTTAACAACAGCCCAGACGAGACAGCATATTTTCGAATGATATTGT 1857 Query 1857 ACAGAGAGAACGTTTCGAATTCAATCGTGATGATTCAACCTTCACTGATTTCTTTCTCAT 1916 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 1858 ACAGAGAGAACGTTTCTAATTCAGTCGTGATGATTCAACCTTCACTGATTTCTTTCTCAT 1917 Query 1917 TCCATTCACCGCCAGAACCAATTCTTCTTGATGTAGCATCCATTGCAGCTGACAGAATCC 1976 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1918 TCCATTCACCGCCAGAGCCAATTCTTCTTGATGTAGCATCCATTGCAGCTGACAGAATCT 1977 Query 1977 TACTGTTGGATTCATACTTCACTCTTGTAATATTTCATGGTTCTACCATCGCCCAATGGC 2036 |||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||| Sbjct 1978 TACTGTTGGATTCATACTTCACCCTTGTAATATTTCACGGCTCTACAATCGCTCAATGGC 2037 Query 2037 AAAAAGCTGGATACCATAATCAACCTGAACACCAGGTATTTGAGCATCTGTTGCAATCAC 2096 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| Sbjct 2038 GAAAAGCTGGATACCATAATCAACCTGAACACCAGGCATTTGGGCATCTGTTGCAGTCAC 2097 Query 2097 CTCGTAACTACTCAGACACAATCATCAATGAACGGTTTCCCACTCCGCGTCTTGTCATAT 2156 ||||| ||||| ||||||||||||| | |||| |||||||||||||||||||||| |||| Sbjct 2098 CTCGTGACTACGCAGACACAATCATGAGTGAAAGGTTTCCCACTCCGCGTCTTGTTATAT 2157 Query 2157 GTGATCAGTATGGTTCACAGGCGCGTTTTCTTCTAGCAAAACTGAATCCTTCTGATGGCG 2216 | |||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | Sbjct 2158 GCGATCAGTATGGTTCACAGGCTCGTTTTCTTCTAGCAAAACTGAATCCTTGTGATGGAG 2217 Query 2217 AAGCTCCTCTTTCCGGGGAGAGTAATGTTTTCACAGATGATGTTAGCTTGTCTGTGTTTC 2276 | |||| | ||||||| | |||||||||||||| |||||||||||||||||||| |||| Sbjct 2218 ATGCTCATTTTTCCGGCCAAAGTAATGTTTTCACGGATGATGTTAGCTTGTCTGTATTTC 2277 Query 2277 TTGATCATCTTAGACGACTCATTGTTCACTGATAT 2311 |||||||||||||||||||||||||||| |||||| Sbjct 2278 TTGATCATCTTAGACGACTCATTGTTCATTGATAT 2312 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 114708245325 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5