BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481143 Length=2008 Score E Sequences producing significant alignments: (Bits) Value AT4G05505.1 | Symbols: | transposable element gene | chr4:2785... 1727 0.0 AT4G06570.1 | Symbols: | transposable element gene | chr4:3518... 1676 0.0 AT2G12420.1 | Symbols: | transposable element gene | chr2:5027... 1650 0.0 AT4G06627.1 | Symbols: | transposable element gene | chr4:3604... 1539 0.0 AT1G38140.1 | Symbols: | transposable element gene | chr1:1430... 403 3e-111 AT2G05647.1 | Symbols: | transposable element gene | chr2:2104... 307 2e-82 > AT4G05505.1 | Symbols: | transposable element gene | chr4:2785708-2787991 FORWARD LENGTH=2284 Length=2284 Score = 1727 bits (935), Expect = 0.0 Identities = 1252/1399 (89%), Gaps = 46/1399 (3%) Strand=Plus/Plus Query 642 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTAT-CTGCTAAGTAGATT 700 ||| |||||| | || |||||||||||||||||||||||||||| || | |||| |||| Sbjct 818 AGTTGATTAGAATAAGAGTTAATATTGAGTAATGTGTGTGTGTATCCT-CAAAGTTGATT 876 Query 701 AGGTGTGT-ATAT-GGTAAGCTGAGTAT-ATTAGGTTTAGGGTTAATATTGAGTAATATG 757 |||||||| |||| ||| | ||| | |||||||| || |||||||||||||||| || Sbjct 877 AGGTGTGTAATATATTTAA--TAAGT-TGATTAGGTTAAGCGTTAATATTGAGTAATGTG 933 Query 758 TGTGTGTATGGTAAGCTG---A-----GTAGATGCTAATTGGTTTATGTAATTGTAGGTT 809 ||| | |||| |||| || | ||| ||||||||||||||||||||||| ||||| Sbjct 934 TGTATATATGCTAAGTTGATTAGGTTTGTATATGCTAATTGGTTTATGTAATTGAAGGTT 993 Query 810 TGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTTTAA 869 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 994 TGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTCTTCACAAACAAGTTTAA 1053 Query 870 TGGGCCATATTACAATTGGAGTTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCGA 929 |||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 1054 TGGGCCATTTTACAGTTGGAGCTGTGTACCTACTGAAAGAAGACACATATACTTCCTCGA 1113 Query 930 ATTCGCGGTAAATTAACTTCTATTGTC-T-GT-A--TC---CATTTGGTTTGGTTTGGTT 981 |||||| |||||||||||||| | || | | | || ||||||||||||||||||| Sbjct 1114 ATTCGCAATAAATTAACTTCTA-TCTCTTATTAATCTCTTACATTTGGTTTGGTTTGGTT 1172 Query 982 GTTTGATCACTAACATCAAACTCTCCTCTTGTTTTATAGAAAACACACACATGGCATCCA 1041 ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 1173 GTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTACACACACATGGCATCCA 1232 Query 1042 TCACTGACCGGTGTAATTGAAGAGAAATT-TTACAAAATATGTC-AGCTGCGTATGAAGG 1099 |||||||| |||||| ||||||| ||||| || |||||||||| | | ||||||||||| Sbjct 1233 TCACTGACTGGTGTAGTTGAAGAAAAATTCTT-TAAAATATGTCAAAC-GCGTATGAAGG 1290 Query 1100 ACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAGAAGA 1159 |||||||||||||||||||| ||||||| || | |||| ||||||||||||||||||||| Sbjct 1291 ACATGGTTTCTAAGGCTTGCGCAAAACGTGCAAATGAGCGACCGCCATGGATTGAGAAGA 1350 Query 1160 CATTGTGGAAGGAAATGTGTGAGTATTTGGACACAGAAGAAGCCCTTGCCAAGAGTTCAA 1219 ||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||| Sbjct 1351 CATTGTGGAAGGAAATGTGTGCGTATTGGGACACAAAAGAAGCCATTGCCAAGAGTTCAA 1410 Query 1220 CCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGTATCGG 1279 |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 1411 CCACATCAGCAGCTTGAATGTCTGACCGTAATGGTCCTGGTCCTCACAAACATGTATCGG 1470 Query 1280 GGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACA-TCAAGCACTCT-T- 1336 ||||||||||||||||||| || ||||||||||| |||||||||| | | | | | Sbjct 1471 GGCCAAAGTCTTTCTTACAGATTGAGCAAGAGATAGTAAGTTACATTTGTTTA-TTTATA 1529 Query 1337 G--T--TTATTTATTAAGAATTTAAAtttttttGTGAACAACATTTCAGGAAATTGAGCT 1392 | | || |||||||||| | | |||| ||||||||||||||||||||||||||||| | Sbjct 1530 GAATGATT-TTTATTAAGAGTCTGAATTGTTTTGTGAACAACATTTCAGGAAATTGAGTT 1588 Query 1393 GGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACTCATACCAAAAAAGATGGGAG 1452 ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 1589 GGGAAGACCACCTACTATTGGTGAGATATTCGTTAAGACTCATACCAAAAAAGATGGGAC 1648 Query 1453 TTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAAGAACAAGGAAGCTAA 1512 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 1649 TTTTGTTGATAGGAAGGCGCATGAAATTCATGAGGCATATTTGAGGAACAAGGAAGCTAA 1708 Query 1513 GTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCGATCAGAACTATC 1572 ||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1709 GTTGGCTGCCCGTGAGAATGATGAAGGGTCAGATGGTACTTCCCGTCGATCAGAACTATC 1768 Query 1573 TCAAGAGGAGGATGATGAGATCTTCCTTCTGGTAATG-TGGTTGATCCTCtt-t-ttttt 1629 ||| ||||||||||||||| ||||||||| ||||||| | ||| ||||||| | ||||| Sbjct 1769 TCAGGAGGAGGATGATGAGGTCTTCCTTCAGGTAATGGTC-TTGTTCCTCTTGTCTTTTT 1827 Query 1630 tATTATTATTATCACTTACTTCATCTTTTA-AGAACTAATCCTCTTGTCttttttttGCA 1688 | |||| |||||||||| ||||||||||| | || ||||||||||||||||| |||||| Sbjct 1828 T-TTAT-ATTATCACTTGCTTCATCTTTTCTACAA-TAATCCTCTTGTCTTTTGTTTGCA 1884 Query 1689 GTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACAT 1748 |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| Sbjct 1885 GTCAACTGTCACAAACAAGAGATGGGTATACTTTGGAATGGGAAGCTTAGGGAGGTACAT 1944 Query 1749 CAATGGGAAGAGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGCAGTCACAGCT 1808 |||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1945 CAATGGAAAGCGGAAGTACCCAGGCTGCAGTTCTGCTTTCACTACCTTGCAGTCACAGCT 2004 Query 1809 TGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGAATCTCCAAGCACATCGGGAGGCAGA 1868 | ||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct 2005 TTAGGAAGCCAACTGCAAGATAGAAGAACAAGCGACTCTCCAGGCACATCGTGAGGCAGA 2064 Query 1869 GGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGAGCAACAAGC 1928 ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2065 GGCATTGAGGGTGAAAGCTGAGCAAGCAGATATCAAGCGTGTTGCTAATGAGCAACAAGA 2124 Query 1929 AGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGACCCCAAGTTTCT 1988 |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| Sbjct 2125 AGAGATCAAACACTTGAGGATGGTTAAGAAGTACTTGACAGAAAGAGACCCCAAGTTTCT 2184 Query 1989 CGCCTTCCTCGAGTCTGCT 2007 ||| ||||||||||||||| Sbjct 2185 CGCATTCCTCGAGTCTGCT 2203 Score = 512 bits (277), Expect = 5e-144 Identities = 480/574 (84%), Gaps = 30/574 (5%) Strand=Plus/Plus Query 90 AATCGAAGACCTAGGGGTCTTCCCATCCAGTATGAGTTCACGCCGGCGAATCGTCAAGCC 149 |||||||| || || |||| ||||| ||| || |||||||||| || || ||||| |||| Sbjct 112 AATCGAAGGCCCAGTGGTCATCCCAGCCACTACGAGTTCACGCTGGTGATTCGTCCAGCC 171 Query 150 CCTCTTCAAGATTCTGAACAAGAGCCGATTGCACAGCCTCCAACGGGTCCAACCATCAGG 209 || |||||||||| |||||| | |||| |||||||||| ||||||||||| || ||||| Sbjct 172 CCGCTTCAAGATTTTGAACATCATCCGACTGCACAGCCTTCAACGGGTCCATCCGTCAGG 231 Query 210 GACTATCCTCCCCCGACGCAACTTTTCCAGTCAGGCGAAGGATCTCCTCGC--A------ 261 ||||||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct 232 GACTATCCTCCTCCGACGCAACTTTTCCAGTCAGGCGAAGGGTCTCCTCGCGGATCTTGT 291 Query 262 ----------GATCTGGCTCGACTCCATTTCGAGCATCCGGATCTACTCAACCTAGATCT 311 ||||||| ||||||| ||| |||||||||| || ||||||||||||||| Sbjct 292 TCTCCTCGTGGATCTGGATCGACTCTGTTTTGAGCATCCGGCTCGACTCAACCTAGATCT 351 Query 312 GGAGGATCTGTTCATCGTCTAGCCTCCAAGTTCAA-ACAATCAGTCTCCAGCGCCGGTTC 370 |||||||||||||||||||||||||| | | | | |||||| || | |||| |||||| Sbjct 352 GGAGGATCTGTTCATCGTCTAGCCTCTACGG-CGAGACAATC--TC-C-AGCGGCGGTTC 406 Query 371 AACGGGAA-GCCTCCAATCAGTCTCCAGCGCCGGTTCAACGGGAAGCCTCAAATCCTCCA 429 | | ||| ||||||||||||||| ||||| ||||||||| ||||| || ||||||| | Sbjct 407 A-CAAGAATGCCTCCAATCAGTCTATAGCGCTGGTTCAACGAGAAGCATCCAATCCTCTA 465 Query 430 CCTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCT 489 | || ||| || |||||||||| ||||||||||| |||||| |||||||||||||||||| Sbjct 466 CTTCCGCAAGCCTCAAATCCTCTACCTCGAGCCTATGTATCTCATCACAGCTCTCAAGCT 525 Query 490 CAAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGAT-TATGA 548 ||||||||||| ||||| |||||||||||||| || |||||||||| ||||||| | ||| Sbjct 526 CAAAACTCACACGCGGAGGAAGATGAAGATGATGATGCTGAGTTTGTGGCTGATCT-TGA 584 Query 549 AAGGGAATCAACTCTCCCTGAAGATTCGCTTGCCACTCTCCATGAGTTGCTT-CTCCGGC 607 ||||||||||||||||||||||| || |||||| | ||| ||||| ||||| | || || Sbjct 585 AAGGGAATCAACTCTCCCTGAAGCTTTGCTTGCAAATCTACATGACATGCTTGC-CCAGC 643 Query 608 CAGGACGTGAGAAGTATACAACGGTCATCTCTCC 641 |||| |||||||||||||||||||| |||||||| Sbjct 644 CAGGCCGTGAGAAGTATACAACGGTTATCTCTCC 677 > AT4G06570.1 | Symbols: | transposable element gene | chr4:3518688-3520916 FORWARD LENGTH=2229 Length=2229 Score = 1676 bits (907), Expect = 0.0 Identities = 1238/1390 (89%), Gaps = 53/1390 (4%) Strand=Plus/Plus Query 642 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTGTGTATCTGCTAAGTAGATTA 701 ||| |||||||| || ||||||||||||||| ||||||| |||||||| ||||| Sbjct 846 AGTTGATTAGGTGAAGCGTTAATATTGAGTAA------TGTGTATATGCTAAGTTGATTA 899 Query 702 GGTGTGTATATGGTAAGCTGAGTATATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 761 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 900 GGTTTGTATATGGTAAGCTGAGTAGATTAGGTTTAGGGTTAATATTGAGTAATA--TGTG 957 Query 762 TGTATGGTAAGCTGAGTAGATGCTAATTGGTTTATGTAATTGTAGGTTTGGTCACGACAA 821 || | || | | ||||||||||||||||||||||||||||||||||||||||| || Sbjct 958 TG-A--GT----TTA-TAGATGCTAATTGGTTTATGTAATTGTAGGTTTGGTCACGAAAA 1009 Query 822 TGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTTTAATGGGCCATATTA 881 ||||||| |||||| |||||||||||||||||| | |||||||||| ||||||||||||| Sbjct 1010 TGGTAAGATGACCCAGAAGATCACAAAGGTATTTAAAAACAAGTTTGATGGGCCATATTA 1069 Query 882 CAATTGGAGTTGTGTACCTACTGAAAGAAGACACAAATACTTCCTCGAATTCG-CG---- 936 || |||||| | ||||||||| |||| |||||||||||||||||||||||||| || Sbjct 1070 CAGTTGGAGCTATGTACCTACAGAAA-AAGACACAAATACTTCCTCGAATTCGCCGTAAA 1128 Query 937 GTAA-----A-----T--TAA---CTTCTATTGTCTGTATCCATTTGGTTTGGTTTGGTT 981 ||| | | ||| |||||||||| ||||||||||||||||||||||||| Sbjct 1129 TTAACTTTTATCTCCTAGTAATCTCTTCTATTGTTTGTATCCATTTGGTTTGGTTTGGTT 1188 Query 982 GTTTGATCACTAACATCAAACTCTCCTCTTGTTTTATAGAAAACACACACATGGCATCCA 1041 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1189 GTTTGATCACTAACATCAAATTCTCCTCTTGTTTTATAGAAAACACACACTTGGCATCCA 1248 Query 1042 TCACTGACCGGTGTAATTGAAGAGAAATTTTACAAAATATGTCAGCTGCGTATGAAGGAC 1101 |||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||| Sbjct 1249 TCACTGACTGGTGTAATTGTAGAAAAATTCTACAAAATATGTCAGCTGCGTATGAAGGAC 1308 Query 1102 ATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGACCGCCATGGATTGAGAAGACA 1161 |||||||||||||||||| |||||| | ||| |||| || |||||||||||||||||| Sbjct 1309 ATGGTTTCTAAGGCTTGCGCAAAACAAACCAATGAGCTTCCACCATGGATTGAGAAGACA 1368 Query 1162 TTGTGGAAGGAAATGTGTGAGTATTTGGACACAGAAGAAGCCCTTGCCAAGAGTTCAACC 1221 ||||||||||||||||||| ||||| |||||||||||||| | |||||||||||| |||| Sbjct 1369 TTGTGGAAGGAAATGTGTGTGTATTGGGACACAGAAGAAGTCATTGCCAAGAGTTAAACC 1428 Query 1222 ACATCAGCA-GCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATGTATCGGG 1280 ||||| ||| | ||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct 1429 ACATCCGCAAG-TCGAATGTCTGACCGTAATGGTCTTGGCCCTCAAAAACATGTATCGGG 1487 Query 1281 GCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTACATCAAGCACTCTTGTTT 1340 | ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 1488 GACAAAGTCTTTCTTACAAATCGAGTAAGAGATTGTAAGTTACATCAAGCACTCTTGTTT 1547 Query 1341 ATTTATTAAGAATTTAAAtttttttGTGAACAACATTTCAGGAAATTGAGCTGGGAAGAC 1400 ||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1548 ATTTATTAAGAATCTGAATTGTTTTGTGAACAACATTTCAGGAAATTGAGCTGAGAAGAC 1607 Query 1401 CACCTACTATTGGTGAGATATTCATTAGGACTCATACCAAAAAAGATGGGA-GTTTTGTT 1459 ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| ||| Sbjct 1608 AACCTACTATTGTTGAGATATTCCTTAGGACTCATACCAAAAAAGATGGGACGTT--GTT 1665 Query 1460 GATAGGAAGGCGCAGGAAATTCATGAGGCATATTTGAA-GAACAAGGAAGCTAAGTTGGC 1518 || | |||| ||| ||||||||||||||||||||| | || ||||||||||||||||| Sbjct 1666 GACACGAAGATGCAAGAAATTCATGAGGCATATTTGTATGA-CAAGGAAGCTAAGTTGGT 1724 Query 1519 TGCCCTTGTGAATGATGAAGGGTCTGATGGTACATCCCGTCGATCAGAACTATCTCAAGA 1578 | |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 1725 TCCCCTTGAGAATGATGAAGGGTCTGATGGTACTTCCCGTCGATTAGAACTATCTCAAGA 1784 Query 1579 GGAGGATGATGAGATCTTCCTTCTGGTAATGTGGTTGATCCTCtttttttttATTATTAT 1638 ||| ||||||||||| ||||||| |||||||||||| || || |||||||||| ||| Sbjct 1785 GGATGATGATGAGATTTTCCTTCAGGTAATGTGGTTAATACT-TTTTTTTTTA--ATT-- 1839 Query 1639 TATCACTTACTTCATCTTTTAAGAACTAATCCTCTTGTCttttttttGCAGTCAACTGTC 1698 ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 1840 ---CACTTCCTTCATCTTTTAAGAACTAATCCTCTTGTCTTTTGTTTGCATTCAACTGTC 1896 Query 1699 ACAAACGAGAGAGGGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACATCAATGGGAAG 1758 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1897 ACAAACGAGAGAGAGGTATACTTCGGAATGGGAAGCTTAGGGAGGTACATCAATGAGAAG 1956 Query 1759 AGGAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTT-GCAGTCACAGCTTGAGGAAGC 1817 ||||||||||| ||| || || ||||||||||||||| ||| |||||| ||||||||| Sbjct 1957 CGGAAGTACCCATGAAACACTTATGCTTTCACTTCCTTTGCAATCACAGTTTGAGGAAGT 2016 Query 1818 CAACCGCAAGATAGAAGAACAAGCGAATCTCCAAGCACATCGGGAGGCAGAGGCATTGCG 1877 |||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||| Sbjct 2017 CAACCGCAAGATAGAAGAACAAGCGACTCTCCAATTACATCGTAAGGCAGAGGAATTGCG 2076 Query 1878 GGTGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGAGCAACAAGCAGAGATCAA 1937 ||| |||| |||||||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct 2077 GGTAAAAGTTGAGCAAGCAGATATCAAGCGTGTTGCTAATAAGCAACAAACAGAGATCAA 2136 Query 1938 ACACTTGAGGATGGTGAAGAAGTACTTGACCGAAACTGACCCCAAGTTTCTCGCCTTCCT 1997 |||||||||||||||||||||||||||||| |||||| |||||| |||||||| ||||| Sbjct 2137 ACACTTGAGGATGGTGAAGAAGTACTTGACAGAAACTAACCCCATGTTTCTCGAATTCCT 2196 Query 1998 CGAGTCTGCT 2007 |||||||||| Sbjct 2197 CGAGTCTGCT 2206 Score = 462 bits (250), Expect = 5e-129 Identities = 346/392 (88%), Gaps = 8/392 (2%) Strand=Plus/Plus Query 252 TCTCCTCGCAGATCTGGCTCGACTCCATTTCGAGCATCCGGATCTACTCAACCTAGATCT 311 ||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||| Sbjct 321 TCTCCTCGCAGATCTGGATCGACTCTGTTTCGAGCATCCGGCTCGACTCAACCTAGATCT 380 Query 312 GGAGGATCTGTTCATCGTCTAGCCTCCAAGTTCAAACAATCAGTCTCCAGCGCCGGTTCA 371 |||||||| |||||| ||||||||||| ||| |||| | | ||||||| | | ||||| Sbjct 381 CGAGGATCTATTCATCATCTAGCCTCCACGTTGAAAC-A--A-TCTCCAGAGGCAGTTCA 436 Query 372 ACGGGAAGCCTCCAATCAGTCTCCAGCGCCGGTTCAACGGGAAGCCTCAAATCCTCCAC- 430 || |||||||||||||||||||||||| |||||||||| ||||| || ||||||| || Sbjct 437 ACCTGAAGCCTCCAATCAGTCTCCAGCGGCGGTTCAACGAGAAGCATCCAATCCTCTACT 496 Query 431 CTCGGCAGGCGTCAAATCCTCCACCTCGAGCCTCTGTATCACATCACAGCTCTCAAGCTC 490 | || | |||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 497 TTAGG-AAGCGTCAAATCCTCCACCTCGAGTCTTTGTATCACATCACAGCTCTCAAGCTC 555 Query 491 AAAACTCACATGCGGAAGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGATTATGAAA 550 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 556 AAAACTCACACGCGGAGGAAGATGAAGATGAGGAAGCTGAGTTTGAGGCTGATTTTGAAA 615 Query 551 GGGAATCAACTCTCCCTGAAGATTCGCTTGCCACTCTCCATGAGTTGCTT-CTCCGGCCA 609 ||||||||||| |||||||||||| |||||| ||||| ||||||||||| | || |||| Sbjct 616 GGGAATCAACTATCCCTGAAGATTTGCTTGCAACTCTATATGAGTTGCTTGC-CCAGCCA 674 Query 610 GGACGTGAGAAGTATACAACGGTCATCTCTCC 641 | | |||||| |||||||||||||||||||| Sbjct 675 AGCCATGAGAAATATACAACGGTCATCTCTCC 706 Score = 69.4 bits (37), Expect = 1e-10 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 642 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATGTGTGTG 681 ||||||||||||||||||||||||||||||||| |||||| Sbjct 920 AGTAGATTAGGTTTAGGGTTAATATTGAGTAATATGTGTG 959 > AT2G12420.1 | Symbols: | transposable element gene | chr2:5027376-5029321 REVERSE LENGTH=1946 Length=1946 Score = 1650 bits (893), Expect = 0.0 Identities = 1260/1423 (89%), Gaps = 81/1423 (6%) Strand=Plus/Plus Query 642 AGTAGATTAGG-TTTAGGGTTAATATTGAGTAATGTGTGTGTGTAT--CTGCTAAGTAGA 698 ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct 473 AGTAGATTAGGTTTTAGGGTTAATATTGAGTAATGTGTGTGTATATAGATGCTAAGTTGA 532 Query 699 TTAGGTGTGTATATGGTAAGCTGAGTATATTAGGTTTAGGGTTAATATTGAGTAATATGT 758 || |||||||||||||||||||| ||| |||| |||||||| |||||||||||||||||| Sbjct 533 TTGGGTGTGTATATGGTAAGCTGTGTAGATTACGTTTAGGGGTAATATTGAGTAATATGT 592 Query 759 G--TGTGTAT-G--G-TAAGCTGAGTA-G-ATGCTAATTGGTTTATGTAATTGTAGGTTT 810 | ||| ||| | | |||| ||| || | | ||||||||||||||||||||||| ||| Sbjct 593 GTATGTATATAGATGCTAAGTTGATTAGGTCTTCTAATTGGTTTATGTAATTGTAGATTT 652 Query 811 GGTCACGACAATGG----TAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGTT 866 |||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||| Sbjct 653 GGTCACGACAATGGTAATTAAGTTGACCTGGAAGATTGCAAAGGTATTCACAAACAAGTT 712 Query 867 TAATGGGCCA-TATTACAATTGGAGTTGTGTACCTACTGAAAGAAGACACAAATACTTCC 925 | |||||||| | ||||| |||||| |||||| ||||||||| |||||| |||||||||| Sbjct 713 TGATGGGCCATTTTTACAGTTGGAGCTGTGTATCTACTGAAA-AAGACATAAATACTTCC 771 Query 926 TCGAATTCGCGGT-AA-----A-------TTAA-C--TT-CTATTGTCTGTATCCATTTG 968 |||||||| | || || | |||| | || ||||||||| |||||||||| Sbjct 772 TCGAATTCAC-GTAAACTTCTATCTCCTGTTAATCTTTTACTATTGTCTATATCCATTTG 830 Query 969 GTTTGGTTTGGTTGTTTGATCACTAACATCAAACTCTCCTC-TTGTTTTATAGAAAACAC 1027 ||||||||| ||||||||||||||||||||||||||||||| || |||| |||||||||| Sbjct 831 GTTTGGTTTCGTTGTTTGATCACTAACATCAAACTCTCCTCTTTTTTTTGTAGAAAACAC 890 Query 1028 ACACATGGCATCCATCACTGACCGGTGTAATTGAAGAGAAATTTTACAAAATATGTCAGC 1087 ||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||| ||| Sbjct 891 ACACATGACATCCATCACTAACCGGTATAATTGAAGAGAAATTCTACAAAATATGTTAGC 950 Query 1088 TGCGTATGAAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAG-AGACCGCCA 1146 |||||||||||||||||||||||||||||||||||||| |||||| | || | ||||||| Sbjct 951 TGCGTATGAAGGACATGGTTTCTAAGGCTTGCTCAAAATGAGCCAATTAGCA-ACCGCCA 1009 Query 1147 TGGATTG-AGAAGACATTGTGGAAGGAAATGTGTGAGTATTTG-GACACAGAAGAAGCCC 1204 ||||||| || |||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 1010 TGGATTGAAG-AGACATTGTGGAAGGAAATGTGTGAGTA-TTGAGACACAGAAGAAGCCA 1067 Query 1205 TTGCCAAGAGTT-CAACCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTCCT 1263 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 1068 TTGCCAAGAGTTCCAATCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGGTTCT 1127 Query 1264 CACAAGCATGTATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAGTTAC 1323 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1128 CACAAGCATGTATCAGGGCCAAAGTCTTTCTTATAAATCGAGCAAGAGATGGTAAGTTAC 1187 Query 1324 ATCAAGCACTCTTGTTTATTTA--T--T----------AAGAATTTAAAtt-tt-ttt-G 1366 |||||||||||||||||||||| | | ||||| || |||| || ||| | Sbjct 1188 ATCAAGCACTCTTGTTTATTTACATAATGTTTTTTCTTAAGAAGTTGAATTGTTGTTTTG 1247 Query 1367 TGAACAACATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATT-CAT 1425 ||||||||||||||||||||| |||| |||||||||||| | ||||||||||||| | | Sbjct 1248 TGAACAACATTTCAGGAAATTTAGCTCAGAAGACCACCTAGTGTTGGTGAGATATTTC-T 1306 Query 1426 TAGGACTCATACCAAAAAAGATGGGAGTTTTGTTGATAGGAAGGCGCAGGAAATTCATGA 1485 |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct 1307 TAGGACTCATACCAAAAAAGATGGGACTTTTGTTGATAGGAAGGCGTAGGTAATTCATGA 1366 Query 1486 GGCATATTTGAAGAACAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGA 1545 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct 1367 GGCATATTTGAAGAACAAGGAAGCTAAGTTGGCTGCCGTTGAGAATGATGAAGGGTCTGA 1426 Query 1546 TGGTACATCCCGTCGATCAGAACTATCTCAAGAGGAGGATGATGAGATCTTCCTTCTGGT 1605 |||||| |||| | ||||| |||||||||||||| ||||||||||||||||||||| ||| Sbjct 1427 TGGTACTTCCCATGGATCATAACTATCTCAAGAGAAGGATGATGAGATCTTCCTTCAGGT 1486 Query 1606 AATGTGGTTGATCCTCtttttttttATTATTATTATCACTTACTTCATCTTTTAAGAACT 1665 ||||||||| ||||| |||||| || | | || |||||||||||||||||||||||||| Sbjct 1487 AATGTGGTTAATCCT-TTTTTTCTT-TG-T-ATCATCACTTACTTCATCTTTTAAGAACT 1542 Query 1666 AATCCTCTTGTCttttttttGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGA 1725 ||||||||||||| || | || ||||||||||| |||| |||||||||||| Sbjct 1543 AATCCTCTTGTCT--------CA---A-CTATCACAAACGAGTGAGGCGTATACTTCGGA 1590 Query 1726 ATGGGAAGCTTAGGGAGGTACATCAATGGGAAGAGGAAGTACCCAGGAAGCAGTTCTGCT 1785 ||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||| |||| Sbjct 1591 ATGGGAAGCTTAGGGAGGT-CATTAATGGGAAGCGGAAGTACCCAAGAAGCAGTTATGCT 1649 Query 1786 TTCACTTCCTTGCAGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGAA- 1844 |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| || Sbjct 1650 TTCACTTCCTTGCAATCACATCTTGAGGAAGCCAATCGCAAGATAGAAGAACAAGC-AAC 1708 Query 1845 TCTCCAAGCACATCGGGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAA 1904 ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1709 TCTCCAAGCACATCGTGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAACCAAAGATCAA 1768 Query 1905 GCGTGTTGCTAATGAGCAACAAGCAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTT 1964 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1769 GCGTGTTGCTAATGAGCAACAAGAAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTT 1828 Query 1965 GACCGAAACTGACCCCAAGTTTCTCGCCTTCCTCGAGTCTGCT 2007 |||| |||||||||| | |||||||| |||||||||||||||| Sbjct 1829 GACCAAAACTGACCCTAGGTTTCTCGTCTTCCTCGAGTCTGCT 1871 > AT4G06627.1 | Symbols: | transposable element gene | chr4:3604916-3606209 FORWARD LENGTH=1294 Length=1294 Score = 1539 bits (833), Expect = 0.0 Identities = 1110/1239 (90%), Gaps = 38/1239 (3%) Strand=Plus/Plus Query 793 TTATGTAATTGTAGGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTA 852 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1 TTATGTAATTGTAGGTTTGGTCACGACAATGGTAAGCTGACCCAGAAGATCACAAAGGTA 60 Query 853 TTCACAAACAAGTTTAATGGGCCATATTACAATTGGAGTTGTGTACCTACTGAAAGAAGA 912 |||| |||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||| Sbjct 61 TTCATAAACAAGTTTGATGGGCCATTTTACAGTTGGAGATGTGTACCTACTGAAAGAAGA 120 Query 913 CACAAATACTTCCTCGAATTCGCGGTAAATTAA---C--T-TC-TATT-GTCTGTATCCA 964 |||| ||||||||||||||||| |||||| ||| | | || |||| ||| | | || Sbjct 121 CACATATACTTCCTCGAATTCGAGGTAAAGTAAGTTCTATCTCTTATTAATCTCT-TACA 179 Query 965 TTTGGTTTGGTTTGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTATAGAAAA 1024 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 180 TTTGGTTTGGTTTGGTTGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTGTAGAGTA 239 Query 1025 CACACACATGGCATCCATCACTGACCGGTGTAATTGAAGAGA-AATT-TTACAAAATATG 1082 |||||||||||||||||||| ||||||||||| ||||| | | | || || |||||||| Sbjct 240 CACACACATGGCATCCATCAGTGACCGGTGTAGTTGAATA-ATAGTTCTT-TAAAATATG 297 Query 1083 TC-AGCTGCGTATGAAGGACATGGTTTCTAAGGCTTGCTCAAAACGAGCCACTGAGAGAC 1141 || | | ||||||||||||||||||||||||||||||| ||| ||| |||| |||| ||| Sbjct 298 TCAAAC-GCGTATGAAGGACATGGTTTCTAAGGCTTGCGCAAGACGTGCCAATGAGCGAC 356 Query 1142 CGCCATGGATTGAGAAGACATTGTGGAAGGAAATGTGTGAGTATTTG-GACACAGAAGAA 1200 ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| Sbjct 357 CGCCATGGATTGAGAAGACATTGTGGAAGGAAATGTGTGCGTA-TTGAGACACAGAAGAA 415 Query 1201 GCCCTTGCCAAG-AGTTCAACCACATCAGCAGCTCGAATGTCTGACCGTAATGGTCTTGG 1259 ||| || || || |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 416 GCCATTACC-AGAAGTTCAACCACATCAGTAGCTCGAATGTCTGACCGTAATGGTCTTGG 474 Query 1260 TCCTCACAAGCATGTATCGGGGCCAAAGTCTTTCTTACAAATCGAGCAAGAGATGGTAAG 1319 ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 475 TCCTCACAAACATGTATCGGGGCCAAAGTCTTTCTTACAGATTGAGCAAGAGATGGTAAG 534 Query 1320 TTACA-----TCAAGCACT-CTTGTTTATTTATTAAGAATTTAAAtttttttGTGAACAA 1373 ||||| | | | | || || |||||||||| | | |||| |||||||||||| Sbjct 535 TTACATTTGTTTATTTAATGAATGATT-TTTATTAAGAGTCTGAATTGTTTTGTGAACAA 593 Query 1374 CATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATTGGTGAGATATTCATTAGGACTC 1433 |||||||| |||||||||| |||||||||||||||||||||||| ||||| ||| ||||| Sbjct 594 CATTTCAGAAAATTGAGCTAGGAAGACCACCTACTATTGGTGAGGTATTCGTTAAGACTC 653 Query 1434 ATACCAAAAAAGATGGGAGTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGGCATATT 1493 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 654 ATACCAAAAAAGATGGGACTTTTGTTGATAAGAAGGCGCAGGAAATTCATGAGGCATATT 713 Query 1494 TGAAGAACAAGGAAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGATGGTACAT 1553 |||||||||||||||||||||||||||||| || ||||||||||||||| || ||||| | Sbjct 714 TGAAGAACAAGGAAGCTAAGTTGGCTGCCCGTGAGAATGATGAAGGGTCAGACGGTACTT 773 Query 1554 CCCGTCGATCAGAACTATCTC-AAGAGGAGGATGATGAGATCTTCCTTCTGGTAATG-TG 1611 ||||||||||||||||||||| || ||||||| |||||| ||||||||| ||| ||| | Sbjct 774 CCCGTCGATCAGAACTATCTCTAA-AGGAGGAGGATGAGGTCTTCCTTCAGGTCATGGTC 832 Query 1612 GTTGATCCTCtttttttttATTAT-TATTATCACTTACTTCATCTTTTAAG-AACTAATC 1669 ||| || |||||| ||| || | ||||||||||| ||||||||||| | || |||| Sbjct 833 -TTGGTCTTCTTTTATTTC-TTCTCTATTATCACTTGCTTCATCTTTTCTGCAA-TAATT 889 Query 1670 CTCTTGTCttttttttGCAGTCAACTGTCACAAACGAGAGAGGGGTATACTTCGGAATGG 1729 ||| ||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||| Sbjct 890 CTC--GTCTTTTGTTTGCAGTCAACTATCACAAACGAGAGAGGGATATACTTTGGAATGG 947 Query 1730 GAAGCTTAGGGAGGTACATCAATGGGAAG-AGGAAGTACCCAGGAAGCAGTTCTGCTTTC 1788 ||||||||||||||||||||||||||||| || ||||||||||| |||| || ||||||| Sbjct 948 GAAGCTTAGGGAGGTACATCAATGGGAAGCAG-AAGTACCCAGGCAGCAATTTTGCTTTC 1006 Query 1789 ACTTCCTTGCAGTCACAGCTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGAATCTC 1848 ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct 1007 ACTACCTTGCAATCACAACTTGAGGAAGCCAACCGCAAGATAGAAGAACAAGCGACTCTC 1066 Query 1849 CAAGCACATCGGGAGGCAGAGGCATTGCGGGTGAAAGCTGAGCAAGCAGAGATCAAGCGT 1908 ||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||| Sbjct 1067 CAAGCACATCGTGAGGTAGAGGCATTGCGCGTGAAAGCTGAGCAAGCAGATATCAAGCGT 1126 Query 1909 GTTGCTAATGAGCAACAAGCAGAGATCAAACACTTGAGGATGGTGAAGAAGTACTTGACC 1968 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1127 GTTGCTATTGAGCAACAAGCAGAGATCAAACACTTGAGGATGGTTAAGAAGTACTTGACA 1186 Query 1969 GAAACTGACCCCAAGTTTCTCGCCTTCCTCGAGTCTGCT 2007 ||||||||||||||||||||||| ||||||||| ||||| Sbjct 1187 GAAACTGACCCCAAGTTTCTCGCATTCCTCGAGACTGCT 1225 > AT1G38140.1 | Symbols: | transposable element gene | chr1:14300842-14302929 FORWARD LENGTH=2088 Length=2088 Score = 403 bits (218), Expect = 3e-111 Identities = 609/785 (78%), Gaps = 77/785 (10%) Strand=Plus/Plus Query 806 GGTTTGGTCACGACAATGGTAAGCTGACCCGGAAGATCACAAAGGTATTCACAAACAAGT 865 |||||||| | ||||| ||| | | || || |||||||||| || || |||||||||| Sbjct 878 GGTTTGGTAAGGACAAGGGT-ATTTTACTAGGTAGATCACAAAAGTTTTTACAAACAAGT 936 Query 866 TTAATGGGCCATATTACAATTGGAGTTGTGTACCTACTGAAAGAAGACACAA-ATACTTC 924 || ||| ||||||||||| |||||| ||||| ||||||| ||||||| | || ||||||| Sbjct 937 TTGATGAGCCATATTACAGTTGGAGATGTGTGCCTACTGCAAGAAGAGA-AAGATACTTC 995 Query 925 CTCGAATTCGCGGTAAATTAACTTCTATTGTCTGTATCCA--TT-T-GGTTTGGTTTGGT 980 ||||||||| ||| | |||||||| | || | || | || | |||| |||||| Sbjct 996 TTCGAATTCG-GGT-GA--AACTTCTA-TCTC-CTCTCAATTTTCTACTTTTGTTTTGGT 1049 Query 981 TGTTTGATCACTAACATCAAACTCTCCTCTTGTTTTATAGAAAACACACAC-A-TGGCAT 1038 | ||| |||||||||||||||||||| ||||||||| | |||||||| || | ||| || Sbjct 1050 TATTTCATCACTAACATCAAACTCTCTTCTTGTTTTGCAAAAAACACATACAATTGGGAT 1109 Query 1039 CCATCACTGACCGGTGTAATTGAAGAGAAATTTTACAAAATATGTCAGCTGCGTATGAAG 1098 || ||||| || |||| ||||||| |||| || || || ||||| ||||||||||| Sbjct 1110 CCCTCACTTACTAGTGTGATTGAAGCCAAATACTATAAGATTTGTCAACTGCGTATGAAA 1169 Query 1099 GACATGGTTTCTAAGGCTTGCTCAAAACGA-GCCACTGAGAG--ACCGCCATGGATTGAG 1155 |||||||||| ||| | || | || | || ||||| ||| | ||||||||| Sbjct 1170 GACATGGTTTGTAA-G--TG-----AGGGAGGTTAC-GAGAGCAACCTCTTTGGATTGAG 1220 Query 1156 AAGACATTGT-GGAAGGAAATGTGTGAGTATTTGGACACAGAAGAAGCCCTTGCCAAGAG 1214 || ||||||| |||| ||||||||| | |||| |||||||||||||||| || |||| Sbjct 1221 AACACATTGTGGGAA-GAAATGTGTAACTATTGGGACACAGAAGAAGCCAAAGCAAAGAT 1279 Query 1215 TTCAACCACATCAGC-AGCTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATG 1273 || ||| |||||| | | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1280 TTTAACTACATCATCTA-CTCGAATGTCTGACCGTAATGGTCTTGGTCCTCACAAGCATG 1338 Query 1274 TATCGGGGCCA--AAGTCT-TTCTTACAAATCGAGCAAGAGATGGTAAGTT-A--CA-TC 1326 ||||||| | | |||| | |||||||||||| | |||||| ||||||||| | || | Sbjct 1339 TATCGGG-C-ATGAAGT-TGTTCTTACAAATCAAACAAGAGGTGGTAAGTTCAAACACTG 1395 Query 1327 --AAGCACTC-TT--GTTTATTTAT-TAAGA---ATT-TAA-A--tt--ttt-ttGTGA- 1369 || || | || ||||| |||| ||| | || ||| | || ||| || || Sbjct 1396 TGAA-CATTTGTTTTGTTTACTTATATAATATCCATCCTAAGAAGTTGATTTGTTTTGTT 1454 Query 1370 -ACAACATTTCAGGAAATTGAGCTGGGAAGACCACCTACTATTGGTGA-GATATTCATTA 1427 ||||||||||||||| |||| | | |||||||||||| | | ||| ||| Sbjct 1455 TACAACATTTCAGGAAGTTGA-C--------C----TACTATTGGTGAAGTT-TTCCTTA 1500 Query 1428 GGACTCATACCAAAAAAGATGGGAGTTTTGTTGATAGGAAGGCGCAGGAAATTCATGAGG 1487 | |||||||||||||||||||||| |||||| |||||||||| | ||||| |||||||| Sbjct 1501 GAACTCATACCAAAAAAGATGGGACTTTTGTCGATAGGAAGGTGGAGGAAGTTCATGAGT 1560 Query 1488 CATATTTGAAGAACAAGG-AAGCTAAGTTGGCTGCCCTTGTGAATGATGAAGGGTCTGAT 1546 |||| ||||||||||| || ||||||||| |||||||| ||||||||||||| ||| Sbjct 1561 CATAAAAGAAGAACAAGGCAA-CTAAGTTGGTTGCCCTTGAAAATGATGAAGGGTATGAA 1619 Query 1547 GGTAC 1551 ||||| Sbjct 1620 GGTAC 1624 > AT2G05647.1 | Symbols: | transposable element gene | chr2:2104362-2104646 REVERSE LENGTH=285 Length=285 Score = 307 bits (166), Expect = 2e-82 Identities = 216/240 (90%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 1761 GAAGTACCCAGGAAGCAGTTCTGCTTTCACTTCCTTGCAGTCACAGCTTGAGGAAGCCAA 1820 ||||||||||| |||||||||| ||||||| ||||||| | |||||||||||||||||| Sbjct 3 GAAGTACCCAGTAAGCAGTTCTTCTTTCACAACCTTGCAATTACAGCTTGAGGAAGCCAA 62 Query 1821 CCGCAAGATAGAAGAACAAGCGAATCTCCAAGCACATCGGGAGGCAGAGGCATTGCGGG- 1879 || ||||||||| |||||||| | ||| ||||||||||| ||||||||||| ||||||| Sbjct 63 CCTCAAGATAGATGAACAAGCTACTCTACAAGCACATCGTGAGGCAGAGGCTTTGCGGGT 122 Query 1880 TGAAAGCTGAGCAAGCAGAGATCAAGCGTGTTGCTAATGAGCAACAAGCAGAGATCAAAC 1939 || |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | Sbjct 123 TG-CAGCTGAGCAAGCAGAGATCAAGCGGGTTGCAAATGAGCAACAAGCAGAGATCAAGC 181 Query 1940 ACTTGAGGATGGTGAAGAAGTACTTGACCGA-AACTGACCCCAAGTTTCTCGCCTTCCTC 1998 ||||||||||||||||||||||||||||| | ||| ||||| || ||||||||||||||| Sbjct 182 ACTTGAGGATGGTGAAGAAGTACTTGACC-ACAACAGACCCAAATTTTCTCGCCTTCCTC 240 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 99497480190 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5