BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481152
Length=1464
Score E
Sequences producing significant alignments: (Bits) Value
AT2G22900.1 | Symbols: | Galactosyl transferase GMA12/MNN10 fa... 2222 0.0
AT4G37690.1 | Symbols: | Galactosyl transferase GMA12/MNN10 fa... 867 0.0
> AT2G22900.1 | Symbols: | Galactosyl transferase GMA12/MNN10
family protein | chr2:9744225-9746292 REVERSE LENGTH=1583
Length=1583
Score = 2222 bits (1203), Expect = 0.0
Identities = 1386/1471 (94%), Gaps = 25/1471 (2%)
Strand=Plus/Plus
Query 1 ATCATCGCATTTCCAATCATCTCCGATGGCAAAATACGCCGGAGCAAGAACAAGACCGGT 60
|||||| |||| |||||||||||| |||||||||||||||||| ||||||| ||||||||
Sbjct 120 ATCATCACATTACCAATCATCTCCAATGGCAAAATACGCCGGAACAAGAACCAGACCGGT 179
Query 61 CATATGTTTCTCCGACGTCGTTCTCTTCCTCGGCGGAGCTTTCATGTCTTTAATCCTCGT 120
||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 180 TGTATGTATCTCCGACGTCGTTCTCTTCCTTGGCGGAGCTTTCATGTCACTAATCCTCGT 239
Query 121 CTGGTCATTCCTCTCCTTCTCTTCACTTTCACCAAATCTCACCGT-CAAAACCAACGAAT 179
|||||| ||| |||||||||||||| | || |||||||||||||| ||||| || ||||
Sbjct 240 CTGGTCTTTCTTCTCCTTCTCTTCAATCTCCCCAAATCTCACCGTGAAAAACGAA-GAAT 298
Query 180 CCTCCGCCAAATGTTCTCCAGAAATCGACATGAAG-TACGATCCAACCGACCCGGTTTAC 238
||||| |||||||||| ||| |||||| ||| || | |||||||||||||||||||||
Sbjct 299 CCTCCAACAAATGTTCTTCAGGAATCGATATG-AGCCAAGATCCAACCGACCCGGTTTAC 357
Query 239 TACGACGAGCCGGATCTAACCTATACAATCGAAAAACCGGTTAAAAACTGGGACGAGAAA 298
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 358 TACGACGACCCGGATCTAACCTACACAATCGAAAAACCGGTTAAAAACTGGGACGAGAAA 417
Query 299 CGAAGACGTTGGTTAAATCTACACCCTTCGTTTATCACCGGAGCTGAGAATCGTACGGTT 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 418 CGAAGACGTTGGTTAAATCTACACCCTTCGTTTATCCCCGGAGCTGAGAATCGTACGGTT 477
Query 359 ATGGTAACCGGATCACAATCGGCGCCGTGTAAAAACCCAATCGGAGATCATTTGTTG-TT 417
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 478 ATGGTAACAGGATCACAATCTGCGCCGTGTAAAAACCCAATCGGAGATCATTTGTTGCTT 537
Query 418 ACGATTTTTTAAGAACAAAGTTGATTATTGTCGGATGCATGGTCATGATATATTCTATAG 477
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 538 -CGATTTTTTAAGAACAAAGTTGATTATTGTCGGATCCATGGTCATGATATATTCTATAG 596
Query 478 TAACGCTCTTCTTCATCCGAAGATGAATTCTTATTGGGCGAAACTTCCGGCGGTTAAAGC 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TAACGCTCTTCTTCATCCGAAGATGAATTCTTATTGGGCGAAACTTCCGGCGGTTAAAGC 656
Query 538 GGCGATGATTGCTCATCCTGAGGCGGAGTGGATCTGGTGGGTTGATTCTGATGCTTTGTT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 GGCGATGATTGCTCATCCTGAGGCGGAGTGGATCTGGTGGGTTGATTCTGATGCTTTGTT 716
Query 598 TACGGATATGGATTTTACGCCGCCGTGGC-ATCGGTATAAGGAGCATAATCTTGTTGTTC 656
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 717 TACGGATATGGATTTTACGCCGCCGTGGCGA-CGGTATAAGGAGCATAATCTTGTTGTTC 775
Query 657 ATGGTTGGCCGGGAGTGATTTACAATGATCGGAGTTGGACGGCGTTGAACGCCGGCGTTT 716
|||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||
Sbjct 776 ATGGTTGGCCGGGAGTGATTTATAATGATCGGAGCTGGACGGCGTTAAACGCCGGAGTTT 835
Query 717 TCCTCATTAGGAATTGTCAGTGGTCTATGGAGCTCATTGACACGTGGACAGGTATGGGAC 776
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 836 TTCTCATTAGGAATTGTCAGTGGTCTATGGAACTCATTGACACGTGGACAGGTATGGGAC 895
Query 777 CAGTGAGTCCAGAGTACGCTAAATGGGGACAAATCCAACGGTCAATATTCAAAGACAAAC 836
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 896 CAGTGAGTCCAGAGTACGCAAAATGGGGACAAATCCAACGGTCAATATTCAAAGACAAAC 955
Query 837 TCTTCCCAGAGTCAGACGATCAAACGGCTCTGATTTACTTACTCTACAAACACAGAGAAG 896
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 956 TCTTCCCAGAGTCAGATGATCAAACGGCTCTGCTTTACTTACTCTACAAACACAGAGAAG 1015
Query 897 TCTATTATCCCAAA-ATATACCTCGAAGGAAACTTTTATTTCGAAGGATATTGGTTAGAG 955
| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1016 TGTATTATCC-AAAGATATACCTCGAAGGAGACTTTTATTTCGAAGGATATTGGTTAGAG 1074
Query 956 ATCGTACCGGGTTTAACCAACGTAACGGAACGGTATCTAGAGATGGAACGAGAAGACGCC 1015
||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 1075 ATCGTACCGGGTTTATCCAACGTAACGGAACGGTATCTGGAGATGGAAAGAGAAGACGCC 1134
Query 1016 ACGTTGCGTAGACGTCACGCAGAGAAAGTGAGTGAACGATACGGTGCGTTTCGTGAGGAA 1075
|||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1135 ACGTTGCGTAGACGACACGCAGAGAAAGTGAGCGAACGATACGCTGCGTTTCGTGAGGAA 1194
Query 1076 CGGTTTTTAAAAGGAGAAAGAGGCGGGAAAGGAAGTAAACGGAGACCGTTCGTGACGCAT 1135
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1195 CGGTTTTTAAAAGGAGAAAGAGGCGGGAAAGGAAGCAAACGGAGACCGTTCGTGACGCAT 1254
Query 1136 TTTACGGGATGTCAACCTTGTAGTGGTGATCATAACAAGATGTACGATGGTGACACGTGT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 TTTACGGGATGTCAACCTTGTAGTGGTGATCATAACAAGATGTACGATGGTGACACGTGT 1314
Query 1196 TGGAATGGGATGATCAAAGCCATTAATTTCGCTGATAATCAAGTGATGCGTAAGTATGGT 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1315 TGGAATGGGATGATCAAAGCCATTAATTTCGCTGATAATCAAGTGATGCGTAAATATGGT 1374
Query 1256 TTCGTACACTCGGATCTAGGGAAGACTTCCCCTCTTCAACCTCTACCGTTCGATTATCCT 1315
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 1375 TTCGTACACTCGGATCTAGGCAAGACTTCCCCTCTTCAACCTGTACCGTTCGATTATCCT 1434
Query 1316 GATGAGCCTTGGTGaaaaaaaaaaaCAAATTGTGTTTTGCTGttttttttAAACTCTTTA 1375
||||||||||||||||| || |||||||||| |||||| | ||||||||||
Sbjct 1435 GATGAGCCTTGGTGAAATAA---------TTGTGTTTTGTTGTTTTAT--AAACTCTTTA 1483
Query 1376 GATGTGCTTTTATAATGAGTTTG-TTATTATAATCCATGAATTGAAAGGTTTATACTGCA 1434
||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| |||
Sbjct 1484 GATGTGCTTTTATAATGAGTT-GATTATTATAATCCATGAAGTGAAAGGTTTATAATGCG 1542
Query 1435 GAAGCTTTTTGAATTATAT-AATGATTATTG 1464
||| |||||||||| || | |||||||||||
Sbjct 1543 GAATCTTTTTGAATAAT-TCAATGATTATTG 1572
> AT4G37690.1 | Symbols: | Galactosyl transferase GMA12/MNN10
family protein | chr4:17707894-17709847 FORWARD LENGTH=1954
Length=1954
Score = 867 bits (469), Expect = 0.0
Identities = 1073/1354 (79%), Gaps = 84/1354 (6%)
Strand=Plus/Plus
Query 16 ATCATCTCCGATGGCAAAATACGCCGGAGC-AAGAACAAG-ACCGGTCATATGTTTCTCC 73
|||||||||||||| |||| || ||| || ||| || || ||| | | ||||||| ||
Sbjct 400 ATCATCTCCGATGGGAAAACCCGGCGGCGCAAAG-ACCAGAACC-GCCGTATGTTTATCA 457
Query 74 GAC-GTCGTTCTCTTCCTCGGCGGAGCTTTCATGTCT-TTAATCCTCGTCTGGTCATT-C 130
||| || ||| |||| |||| |||||||||||||||| | | | ||||||||||| || |
Sbjct 458 GACGGT-GTTTTCTTTCTCGCCGGAGCTTTCATGTCTCTCACT-CTCGTCTGGTC-TTAC 514
Query 131 CTCTCCTTCTCTTCA----CTTTCACCAAATCTCACCGTCAAAACCAACGAATCCTCCG- 185
|||| ||| |||| |||||||| | | | | ||||| | | | || | | |
Sbjct 515 TTCTCAATCTTTTCACCTTCTTTCACC-AGT-TTA-CGTCACGA-CGGC-AA-AC-CGGT 567
Query 186 CCAAATGTTCTCCAGAAATCGACATG-AAGTACGATCCAACCGA-CCCGGTTTACTACGA 243
| |||| |||| | | |||||| || | ||| ||| |||| |||||||| |||||
Sbjct 568 TC-AATG--CTCC-GGTTTAGACATGCAA-TTCGACCCATCCGAGCCCGGTTT-TTACGA 621
Query 244 CGAGCCGGATCTAACCTA-TACAATCGAAAAACCGGTTA-AAAACTGGGACGAGAAACGA 301
||| |||||||||| ||| | | ||||| ||||| | | |||| |||||||||||||||
Sbjct 622 CGACCCGGATCTAAGCTACT-CGATCGAGAAACCAATCACAAAA-TGGGACGAGAAACGA 679
Query 302 AGA-CGTTGG-TTAAATCTACACCCTTCGTTT--ATCACCGGAGCTGAGAATCGTA-CGG 356
| | | ||| || |||| |||||| || ||| | | |||| | || || || | | |
Sbjct 680 A-ACCAATGGTTTGAATC-ACACCCATC-TTTCAAAC-CCGGTTCAGAAAACCGGATC-G 734
Query 357 TTATGGTAACCGGATCACAATCGGCGCCGTGTAAAAACCCAATCGGAGATCATTTGTTGT 416
| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||
Sbjct 735 TAATGGTAACCGGTTCACAATCCTCGCCGTGTAAAAACCCAATCGGAGACCATTTATTAC 794
Query 417 TACGATTTTTTAAGAACAAAGTTGATTATTG-TCGGATGCATGGTCATGATATATTCTAT 475
| |||| || || |||||||| ||||| | ||| || |||||||| || || |||||
Sbjct 795 TCCGATGCTTCAAAAACAAAGTCGATTA-CGCTCGAATCCATGGTCACGACATCTTCTAC 853
Query 476 AGTAACGCTCTTCTTCATCCGAAGATGAATTCTTATTGGGCGAAACTTCCGGCGGTTAAA 535
|| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 854 AGCAATTCTCTTCTTCATCCGAAGATGAATTCTTATTGGGCGAAACTTCCGGTGGTTAAA 913
Query 536 GCGGCGATGATTGCTCATCCTGAGGCGGAGTGGATCTGGTGGGTTGATTCTGATGCTTTG 595
||||||||| ||||||| || |||||||||||||| |||||||||||||| || ||| |
Sbjct 914 GCGGCGATGCTTGCTCACCCAGAGGCGGAGTGGATTTGGTGGGTTGATTCCGACGCTATC 973
Query 596 TTTACGGATATGGATTTTACGCCGCCG-TGGCATCGGTATAAGG--AGCATAATCTTGTT 652
|| || || ||||| |||| |||||| | || || | || | | || || || ||
Sbjct 974 TTCACCGACATGGAATTTAAACCGCCGCTT-CACCG-T-TACCGTCAACACAACCTCGTC 1030
Query 653 GTTCATGGTTGGCCGGG-AGTGATTTACAATGAT-CGGAGTTGGACGGCGTTGAACGCCG 710
||||| |||||||| | | || ||| | || | ||| ||||||||||| |||||||
Sbjct 1031 GTTCACGGTTGGCCAAATA-TAATCTACGA-GAAACAGAGCTGGACGGCGTTAAACGCCG 1088
Query 711 GCGTTTTCCTCATTAGGAATTGTCAGTGGTCTATGGAGCTCA-TTGACACGTGGACAG-G 768
|||||||| | || || |||||||| ||||| ||||| || | |||||||||||| || |
Sbjct 1089 GCGTTTTCTTAATAAGAAATTGTCAATGGTCAATGGA-CTTAATTGACACGTGGA-AGAG 1146
Query 769 TATGGGACCAGTGAGTCCAGAGTACGCTAAATGGGGACAAATCCAACGGTCAATATTCAA 828
||||||||||||||||||||| ||| |||||||| | ||||||||||| ||||||||
Sbjct 1147 TATGGGACCAGTGAGTCCAGATTACAAAAAATGGGGTCCCATCCAACGGTCGATATTCAA 1206
Query 829 AGACAAACTCTTCCCAGAGTCAGACGATCAAACGGCTCTGATTTACTTACTCTACAAACA 888
||| || | || ||||||||||| |||||||||||||||||||| || || || |||||
Sbjct 1207 AGATAAGTTGTTTCCAGAGTCAGATGATCAAACGGCTCTGATTTATTTGCTTTATAAACA 1266
Query 889 CAGAGAAGTC-TATTATCCCAAAATATACCTCGAAGGAAACTTTTATTTCGAAGGATATT 947
| ||| || |||||||| || ||||||||||||| | | | |||| || |||| ||||
Sbjct 1267 TAAAGA-GTTGTATTATCCTAAGATATACCTCGAAGCAGAGTATTATCTCCAAGGGTATT 1325
Query 948 GG-TTAGAGATCGTACC-GGG--TTTAACCAACGTAACGGAACGGTATCTAGAGATGGAA 1003
|| || | | | ||| ||| ||| ||||||| |||||||||||||| |||||||||
Sbjct 1326 GGATT-G-G-T-GTATTTGGGGATTTCGCCAACGTGACGGAACGGTATCTTGAGATGGAA 1381
Query 1004 CGAGAAGACGCCACGTTGCGTAGACGTCACGCAGAGAAAGTGAGTGAACGATACGGTGCG 1063
|||||||||| |||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 1382 CGAGAAGACGACACGTTGCGTAGGCGTCACGCGGAGAAAGTGAGCGAACGATACGGTGCG 1441
Query 1064 TTTCGTGAGGAACGGTTTTTAAAAGGAGAAAGAGGCGGGAAAGGAAGTAAACGGAGAC-C 1122
||| | || || |||||||| ||||| || || |||| ||||||| || |||| |
Sbjct 1442 TTTAGAGAAGAGCGGTTTTTGAAAGGCGAGTTTGGTGGGAGAGGAAGT---CGCAGACGC 1498
Query 1123 G--TTCGTGACGCATTTTACGGGATGTCAACCTTGTAGTGGTGATCATAA-CAAGATGT- 1178
| || | ||||||||||||||||||||||| ||||| ||||||||||| | || ||
Sbjct 1499 GCGTTTATAACGCATTTTACGGGATGTCAACCATGTAGCGGTGATCATAATCC-GA-GTT 1556
Query 1179 ACGATGGTGACACGTGTTGGAATGGGATGATCAAAGCCATTAATTTCGCTGATAATCAAG 1238
|||||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||| |
Sbjct 1557 ACGATGGTGACACGTGTTGGAATGAGATGATCAGAGCCCTTAATTTTGCTGATAATCAGG 1616
Query 1239 TGATGCGTAAGTATGGTTTCGTACACTCGGATCT-AGGGAAGACTTCCCCTCTTCAACCT 1297
||||||| |||||||| ||| || || ||| | || |||||||| || |||||||||
Sbjct 1617 TGATGCGCGTGTATGGTTACGTTCATTCTGATTTGAGT-AAGACTTCTCCGCTTCAACCT 1675
Query 1298 CTACCGTTCGATTATCCTGATGA-GCCTTGGTGa 1330
|| ||||||||||||||| |||| || |||||||
Sbjct 1676 CTGCCGTTCGATTATCCTAATGAAGC-TTGGTGA 1708
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72188383710
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5