BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481188
Length=1901
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23170.1 | Symbols: GH3.3 | Auxin-responsive GH3 family prot... 3003 0.0
AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 | Auxin-r... 1327 0.0
AT1G59500.1 | Symbols: GH3.4 | Auxin-responsive GH3 family prot... 1142 0.0
> AT2G23170.1 | Symbols: GH3.3 | Auxin-responsive GH3 family protein
| chr2:9863855-9866562 REVERSE LENGTH=2118
Length=2118
Score = 3003 bits (1626), Expect = 0.0
Identities = 1817/1909 (95%), Gaps = 14/1909 (1%)
Strand=Plus/Plus
Query 1 ACAAAGTCTAATATTATCCCTTACAACAAACCATTTTAATCATGACCGTTGA-TCTACCT 59
|||||||||||||||||| ||||||| | ||||||||||||||||||||||| || | ||
Sbjct 21 ACAAAGTCTAATATTATCACTTACAA-ATACCATTTTAATCATGACCGTTGATTC-AGCT 78
Query 60 CTGCGATCTCCGATGA-ACTACTCACCGTCCGA-TAAGGACGTGAAGGCTCTGAGGTTCA 117
|||||||||||||||| | ||||||||||| | |||||||||||||||||| |||||||
Sbjct 79 CTGCGATCTCCGATGATGC-ACTCACCGTCC-ACTAAGGACGTGAAGGCTCTAAGGTTCA 136
Query 118 TTGAGGAGATGATACGTAACGTCGATTTCGTTCAGAATAAAGTCATTAGAGAGATACTTC 177
|||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 137 TTGAGGAGATGACACGTAACGTCGATTTCGTTCAGAAGAAAGTGATTAGAGAGATACTTA 196
Query 178 GTCGCAACTCGGAGACTGAGTACCTGAAACGGTTTGGTCTCAAGGGATTCACTGACCGGA 237
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 197 GTCGTAACTCGGACACTGAGTACCTGAAACGGTTTGGTCTCAAGGGATTCACTGACCGTA 256
Query 238 AAGCATTTAAGACCAAAGTTCCGGTGGTTACCTACGATGATCTTAAACCGGAGATTCAAC 297
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 257 AAACATTTAAGACCAAAGTTCCGGTGGTTATCTACGATGATCTTAAACCGGAGATTCAAC 316
Query 298 GTATAGCCAATGGTGACCGGTCTATGATCTTGTCATCACACCCCATCACCGAGTTCCTCA 357
|||| ||||||||||||||||| ||||||||||| || |||||||||| ||||||||||
Sbjct 317 GTATTGCCAATGGTGACCGGTCAATGATCTTGTCTTCTTACCCCATCACAGAGTTCCTCA 376
Query 358 CAAGCTCTGGGACATCAGCTGGTGAAAGGAAGTTGATGCCCACCATTGAAGAAGACATGG 417
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 377 CAAGCTCTGGGACATCAGCTGGTGAAAGGAAGTTGATGCCAACCATTGATGAAGACATGG 436
Query 418 ACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATGAATCTCTACGTGCCCGGAT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 ACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATGAATCTCTACGTGCCCGGAT 496
Query 478 TAGACAAAGGCAAGGCTCTATATTTTTTGTTCGTGAAGACGGAATCGAAGACACCCGGTG 537
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 497 TAGACAAAGGCAAGGCTCTATATTTTTTGTTCGTGAAGACGGAATCGAAGACTCCCGGTG 556
Query 538 GATTACCGGCACGTCCGGTTCTCACGAGTTATTACAAAAGCGAACAATTCAAGAGACGTC 597
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 557 GATTACCAGCACGTCCGGTGCTCACGAGTTATTACAAAAGCGAACAATTCAAGAGACGTC 616
Query 598 CTTACGATCCGTACAACGTGTACACGAGCCCTAACGAAGCCATTCTTTGTCCCGACTCGT 657
|| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 617 CTAACGATCCGTACAACGTGTACACGAGCCCTAACGAAGCCATCCTTTGTCCAGACTCAT 676
Query 658 CCCAAAGCATGTACACTCAGATGCTTTGTGGTCTCCTTATGCGTCACGAAGTCCTCCGTC 717
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 CCCAAAGCATGTACACGCAGATGCTTTGTGGTCTCCTTATGCGTCACGAAGTCCTCCGTC 736
Query 718 TCGGTGCCGTCTTCGCTTCCGGTCTCCTCCGAGCCATAGGGTTCCTTCAAACCAATTGGA 777
|||| |||||||||||||| ||||||||||| ||||| || |||||||||||||||||||
Sbjct 737 TCGGCGCCGTCTTCGCTTCTGGTCTCCTCCGTGCCATTGGATTCCTTCAAACCAATTGGA 796
Query 778 AAGAACTCGCCAACGATATCTCCACCGGTACCCTAAGTTCAAGAATCTCTGATCCGGCTA 837
||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct 797 AAGAACTCGCCGACGATATCTCCACCGGTACCTTAAGTTCAAGAATCTCTGACCCGGCCA 856
Query 838 TTAAAGAGAGCATGTCCAAGATCTTGACCAAACCGGACCAAGAACTGGCTGATTTCATAA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 TTAAAGAGAGCATGTCCAAGATCTTGACCAAACCGGACCAAGAACTGGCTGATTTCATAA 916
Query 898 CTTCGGTATGTGGTCAAGACAATAATTGGGAAGGTATTATTACTAAGATTTGGCCTAACA 957
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 917 CTTCGGTATGTGGTCAAGACAATAGTTGGGAAGGTATTATTACTAAGATTTGGCCTAACA 976
Query 958 CTAAGTACCTTGACGTCATCGTTACTGGAGCCATGGCTCAGTATATCCCGATGCTTGAGT 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 977 CTAAGTACCTTGACGTCATCGTTACTGGAGCCATGGCTCAGTATATCCCGATGCTTGAGT 1036
Query 1018 ACTATAGCGGCGGGTTACCGATGGCTTGCACGATGTATGCATCCTCCGAGAGTTACTTTG 1077
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1037 ACTATAGCGGCGGGTTACCGATGGCTTGCACGATGTATGCATCGTCCGAGAGTTACTTTG 1096
Query 1078 GGATCAACTTGAAACCAATGTGTAAACCTTCTGAGGTTTCTTACACCATTATGCCAAACA 1137
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1097 GGATCAACTTGAAACCAATGTGTAAACCTTCTGAGGTTTCTTATACCATTATGCCAAACA 1156
Query 1138 TGGCCTACTTCGAGTTTCTCCCTCAT---GAAGTCCCAACCGGAAAATCCGAACTTGTAG 1194
|||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
Sbjct 1157 TGGCATACTTCGAGTTTCTCCCTCATCATGAAGTCCCAACCGAAAAATCCGAACTTGTGG 1216
Query 1195 AGCTAGCTGATGTCGAGGTTGGGAAAGAGTACGAGCTTGTGATCACAACCTATGCAGGGC 1254
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1217 AGCTAGCTGATGTCGAGGTCGGGAAAGAGTACGAGCTTGTGATCACAACCTATGCTGGGC 1276
Query 1255 TTAACCGTTATAGAGTTGGTGATATTCTTCAAGTGACTGGATTCTACAATTCCGCTCCAC 1314
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1277 TTAACCGTTATAGAGTTGGTGATATTCTTCAGGTGACTGGATTCTACAATTCCGCTCCAC 1336
Query 1315 AGTTCAAGTTTGTGCGGAGGAAAAACGTTTTGCTTAGCATTGAGTCGGATAAAACCGATG 1374
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1337 AGTTCAAGTTTGTGCGGAGGAAGAACGTTTTGCTTAGCATTGAGTCGGATAAAACCGATG 1396
Query 1375 AAGCTGAGCTCCAAAAG-GCGGTTGAGAATGCATCGGTGTTACTTGGAGAGCAAGGAAAT 1433
||||||||||||||| | ||||||||||| |||||| | ||||||||||||||||||| |
Sbjct 1397 AAGCTGAGCTCCAAA-GCGCGGTTGAGAACGCATCGCTCTTACTTGGAGAGCAAGGAACT 1455
Query 1434 CGCGTGATCGAGTACACAAGCTACGCAGAGACAAAGACTATACCTGGCCATTATGTCATC 1493
|| || ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1456 CGTGTTATCGAGTACACGAGCTATGCAGAGACGAAGACTATACCTGGCCATTATGTCATT 1515
Query 1494 TACTGGGAGTTTCTGGTGAAGGATCAAACCAATCCACCAAATGACGAGGTCATGGCTCGG 1553
||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1516 TACTGGGAGCTTCTAGTGAAGGATCAAACCAATCCTCCAAATGACGAAGTCATGGCTCGG 1575
Query 1554 TGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGGTTGCGGAT 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1576 TGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGGTTGCGGAT 1635
Query 1614 AAGTCGATAGGGCCACTCGAGATACGTGTGGTGAAGAATGGAACGTTCGAGGAGCTCATG 1673
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1636 AAGTCGATAGGACCACTCGAGATACGTGTTGTGAAGAATGGAACGTTCGAGGAGCTCATG 1695
Query 1674 GACTATGCCATCTCGAGAGGAGCCTCGATCAACCAGTACAAGGTGCCGCGGTGTGTGAGT 1733
|||||||||||||| ||||| || |||||||| ||||||||||||||| |||||||||||
Sbjct 1696 GACTATGCCATCTCCAGAGGCGCATCGATCAATCAGTACAAGGTGCCGAGGTGTGTGAGT 1755
Query 1734 TTCACGCCAATAGTGGAGCTGCTTGACTCAAGGGTTGTATCTACACACTTCAGTCCAGCT 1793
|||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1756 TTCACGCCAATAATGGAGCTTCTTGACTCAAGGGTTGTATCTACACACTTCAGCCCAGCT 1815
Query 1794 TTGCCACATTGGTCACCAGAACGCCGTTGTTGAGAAGATTTTGTTTTG-GTTTAGGGTTT 1852
||||||||||||||||||||||| ||| ||||||||||||||| |||| ||| ||| |||
Sbjct 1816 TTGCCACATTGGTCACCAGAACGTCGTCGTTGAGAAGATTTTGGTTTGTGTT-AGGATTT 1874
Query 1853 GTGAGTCGTACAATAAGTTCGGTGTACGGATGTTTACCCGATCAATGTT 1901
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1875 GTGAGTCGTACAATAAGTTCGGTGTACGGATGTTTACCCCATCAATGTT 1923
> AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 | Auxin-responsive
GH3 family protein | chr4:17579657-17582022 FORWARD
LENGTH=2131
Length=2131
Score = 1327 bits (718), Expect = 0.0
Identities = 1444/1785 (81%), Gaps = 87/1785 (5%)
Strand=Plus/Plus
Query 99 GTGAAGGCTCTGAGGTTCATTGAGGAGATGA-TACGTAA-CGTCGATTTC-GTTC-AGAA 154
||||| ||||| | ||||||||| || |||| | || || | | || || |||| || |
Sbjct 126 GTGAAAGCTCTCAAGTTCATTGAAGAAATGACT-CGGAACCCT-GA-CTCGGTTCAAG-A 181
Query 155 TAAAG-TCATTAGAGAGATACT-TCGTCGCAACTCGGAGACTGAGTACCTGAAACGGTTT 212
|| | || || |||||||||| | ||| ||||| | || || || |||||||||||
Sbjct 182 GAAGGTTC-TTGGAGAGATACTGAC-TCGTAACTCTAACACCGAATATCTGAAACGGTTC 239
Query 213 GGTCTCAAGGGAT-TCACTGACCGGAAAGCATTTAAGACCAAAGTTCCGGTGGTTACCTA 271
| ||| | || | || ||| |||||| | || |||| |||||||||||||||||| ||
Sbjct 240 GATCTTGATGG-TGTCGTTGATCGGAAAACGTTCAAGAGCAAAGTTCCGGTGGTTACGTA 298
Query 272 CGATGATCTT-AAACCGGAGATTCAACGTATAGCCAATGGTGACCGGTCTATGATCTTGT 330
||| ||| || || |||||||||||||||||| |||| || || | ||| ||||||||
Sbjct 299 CGAAGAT-TTGAAGCCGGAGATTCAACGTATATCCAACGGCGATTGTTCTCCGATCTTGT 357
Query 331 CATCACACCCCATCACCGAGTTCCTCACAAGCTCTGGGACATCAGCTGGTGAAAGGAAGT 390
| || ||||||||||||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct 358 CTTCTCACCCCATCACCGAGTTTCTCACAAGCTCAGGAACATCTGCTGGTGAGAGGAAAC 417
Query 391 TGATGCCCACCATTGAAGAAGACATGGACCGACGTCAGCTTTTATACAGTCTTCTCATGC 450
| ||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 418 TAATGCCAACAATTGAAGAAGACTTAGACCGACGTCAGCTTTTATACAGTCTTCTCATGC 477
Query 451 CTGTGATGAATCTCTACGTGCCCGGATTAGACAAAGGCAA-GGCTCTATATTTTTTGTTC 509
|||||||||||||||||||||| ||||||||||||||||| || | |||| || || |||
Sbjct 478 CTGTGATGAATCTCTACGTGCCGGGATTAGACAAAGGCAAAGGGT-TATACTTCTTATTC 536
Query 510 GTGAAGACGGAATCGAAGACACCCGGTGGATTACCGGCACGTCCGGTTCTCACGAGTTAT 569
|||||| |||| || ||||| | ||||| |||||||| |||||||||||||||||||||
Sbjct 537 GTGAAGTCGGAGTCAAAGACGTCAGGTGGGTTACCGGCTCGTCCGGTTCTCACGAGTTAT 596
Query 570 TACAAAAGCGAACAATTCAAGAGACGTCCTTACGATCCGTACAACGTGTACACGAGCCCT 629
||||||||||| || ||||||||||| || ||||||||||||||||| ||||| || |||
Sbjct 597 TACAAAAGCGACCACTTCAAGAGACGACCGTACGATCCGTACAACGTCTACACTAGTCCT 656
Query 630 AACGAAGCCATTCTTTG-TCCCGACTCGTCCCAAAGCATGTACACTCAGATGCTTTGTGG 688
||||||||||| || || ||| |||||||||||||||||||| |||| ||||| |||||
Sbjct 657 AACGAAGCCATCCTCTGCTCC-GACTCGTCCCAAAGCATGTATGCTCAAATGCTATGTGG 715
Query 689 TCTCCTTA-TGCGTCACGAAGTCCTCCGTCTCGGTGCCGTCTTCGCTTCCGGTCTCCTCC 747
|||| ||| |||| || ||||| ||||| ||||| || || || ||||||||||||||||
Sbjct 716 TCTC-TTAATGCGCCATGAAGTTCTCCGACTCGGCGCAGTGTTTGCTTCCGGTCTCCTCC 774
Query 748 GAGCCATAGGGTTCCTTCA-AACCAATTGGAAAGAACTCGC-CAACGATATCTCCACCGG 805
| |||||| | ||||| || ||| |||||||| ||||| || | |||||||| |||||
Sbjct 775 GTGCCATAAGCTTCCTCCAGAAC-AATTGGAAGGAACTTGCTCGT-GATATCTCAACCGG 832
Query 806 TACCCTAAGTTCAAGAATCT-CTGATCCGGCTATTAAAGAGAGCATGTCCAAGATCTTGA 864
||||||||||| |||||| | ||||| || |||||| | ||||||||||||| ||||
Sbjct 833 AACCCTAAGTTCTCGAATCTTC-GATCCTGCCATTAAAAACCGCATGTCCAAGATTTTGA 891
Query 865 CCAAACCGGACCAAGAACTGGCTGA-TTTCATAACTTCGG-TATGTGGTCAAGACAATAA 922
||||||| || |||||||||||||| ||| | || || | ||| ||||| |||
Sbjct 892 CCAAACCTGATCAAGAACTGGCTGAGTTTT-TGG-TTGGGGTTTGTTCACAAGAGAAT-- 947
Query 923 TTGGGAAGGTATTATTACTAAGATTTGGCCTAACACTAAGTACCTTGACGTCATCGTTAC 982
| ||||||| || || || ||||| ||||||||||| |||||||| ||||| || |||||
Sbjct 948 T-GGGAAGGGATAATCACAAAGATATGGCCTAACACGAAGTACCTCGACGTGATTGTTAC 1006
Query 983 TGGAGCCATGGCTCAGTATATCCCGATGCTTG-AGTACTATAGCGGCGGGTTACCGATGG 1041
|||||| ||||||||||||||||||| | ||| ||||||||||||| || ||||||||||
Sbjct 1007 TGGAGCAATGGCTCAGTATATCCCGACG-TTGGAGTACTATAGCGGTGGATTACCGATGG 1065
Query 1042 CTTGCACGATGTATGCATCCTCCGAGAGTTACTTT-GGGATCAACTTGAAA-CCAATGTG 1099
|||||||||||||||| || ||||| ||||| ||| ||||| ||| | ||| || |||||
Sbjct 1066 CTTGCACGATGTATGCTTCGTCCGAAAGTTA-TTTCGGGATTAACCT-AAAGCCGATGTG 1123
Query 1100 TAAACCTTCTGAGGTTTCTTACACCATTATGCCAAACATGGCCTACTTCGAGTTTCTCCC 1159
|||||| || |||||||||||||| || |||||||||||||||||||| || || |||||
Sbjct 1124 TAAACCCTCGGAGGTTTCTTACACAATCATGCCAAACATGGCCTACTTTGAATTCCTCCC 1183
Query 1160 TCATGA--A-G-TCCC-A---ACCGG-A-AA--ATC------CGAA-C-T---T-GTAGA 1195
||| | | | | | | | | | || ||| |||| | | | || ||
Sbjct 1184 ACATAATCACGATGGAGATGGAGCAGCAGAAGCATCATTAGACGAAACGTCACTTGTGGA 1243
Query 1196 GCTAGCTGATGTCGAGGTTGGGAAAGAGTACGAGCTTGTGATCACAACCTATGCAGGGCT 1255
||| ||| |||| ||||| || ||||||||||| || |||||||| ||||| || |||||
Sbjct 1244 GCTTGCTAATGTTGAGGTAGGAAAAGAGTACGAACTCGTGATCACGACCTACGCGGGGCT 1303
Query 1256 -TAACCGTTATAGAGTTGGTGATATTCTTCAAGTGACTGGATTCTACAATTCCGCTCCAC 1314
|| |||||| |||||||| || ||||||| || || || ||| | |||||||||||||
Sbjct 1304 CTA-CCGTTACAGAGTTGGCGACATTCTTCGTGTCACGGGGTTCCATAATTCCGCTCCAC 1362
Query 1315 AGTTCAAGTTTGTGCGGAGGAAA-AACGTTTTGCTTAGCATTGAGTCGGATAAAACCGAT 1373
||||||| || | ||||| ||| || ||| |||| ||| | || || |||||||||||
Sbjct 1363 AGTTCAAATTCATACGGAG-AAAGAATGTTCTGCTAAGCGTAGAATCCGATAAAACCGAC 1421
Query 1374 GAAGCTGAGCTCCAAAAGGCGGTTGAGAATGCATCG-GTGTTACTTGGAGAGCAAGGAA- 1431
|| |||||||| ||||| || || |||||||| ||| | ||| ||| |||||||||||
Sbjct 1422 GAGGCTGAGCTACAAAAAGCAGTGGAGAATGCGTCGAG-GTTGTTTGCAGAGCAAGGAAC 1480
Query 1432 ATCGCGTGATCGAGTACACAAGCTACGCAGAGACAAAGACTATACCTGGCCATTATGTCA 1491
| || |||||||||||||||||||||||||| || ||||||||||| || ||||| || |
Sbjct 1481 A-CGTGTGATCGAGTACACAAGCTACGCAGAAACGAAGACTATACCGGGTCATTACGTAA 1539
Query 1492 TCTACTGGGAGTTTCT-GGT-GAAGGATCAAACCAATCCACCAAATGA-CGA-G--GTCA 1545
||||||||||| | || ||| || | |||||| |||| | | | ||| ||| | ||||
Sbjct 1540 TCTACTGGGAGCTACTTGGTAGA-G-ATCAAAGCAATGCTCTTA-TGAGCGAAGAAGTCA 1596
Query 1546 TGGCTCGGTGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGG 1605
||||| |||||| ||||| |||||||| || || ||||| || ||||||||||| ||||
Sbjct 1597 TGGCTAAGTGCTGTTTGGAGATGGAGGAATCTTTAAACTCGGTTTATAGACAAAGCCGGG 1656
Query 1606 TTGCGGATAAGTCGATAGGGCCACTCGAGATACGTGTGGTGAAG-AATGGAACGTTCGAG 1664
| || ||||| ||||| || || | |||||||||||||| | | || || ||||| |||
Sbjct 1657 TCGCTGATAAATCGATCGGCCCGTTGGAGATACGTGTGGT-ACGGAACGGTACGTTTGAG 1715
Query 1665 GAGCTCATGGACTATGCCATCTCGAGAGGAGCCTCGATCAACCAGTACAAGGTGCCGCGG 1724
||||||||||||||||||||||||||||| || ||||| || ||||| ||||| ||| ||
Sbjct 1716 GAGCTCATGGACTATGCCATCTCGAGAGGCGCATCGATTAATCAGTATAAGGTACCGAGG 1775
Query 1725 TGTGTGAGTTTCACGCCAAT-AGTGGAGCTGCTTGACTCAAGGGTTGTATCTACACACTT 1783
|| ||||| ||||| || || | |||||||||||||||| || ||||| ||| | || ||
Sbjct 1776 TGCGTGAGCTTCACACCTATCA-TGGAGCTGCTTGACTCTAGAGTTGTGTCTGCTCATTT 1834
Query 1784 CAGTCCAGCTTTGCCACATTGGTCACCAGAACGCCGTTGTTGAGA 1828
||| || | ||||| ||||||||||||||||| ||| ||| |||
Sbjct 1835 CAGCCCTTCGTTGCCGCATTGGTCACCAGAACGACGTCGTT-AGA 1878
> AT1G59500.1 | Symbols: GH3.4 | Auxin-responsive GH3 family protein
| chr1:21854493-21856614 REVERSE LENGTH=1794
Length=1794
Score = 1142 bits (618), Expect = 0.0
Identities = 1403/1772 (79%), Gaps = 94/1772 (5%)
Strand=Plus/Plus
Query 99 GTGAAGGCTCTGAGGTTCATTGAGGAGATGA-TACGTAA-CGTCGATTTC-GTTC-AGAA 154
||||||||||| | ||||||||||||||| | | || || | | || || |||| ||||
Sbjct 61 GTGAAGGCTCTCAAGTTCATTGAGGAGATTACT-CGGAACCCT-GA-CTCGGTTCAAGAA 117
Query 155 TAAAG-TCATTAGAGAGATACTTCGTCGCAACTCGGAGACTGAGTACCTGAAACGGTTTG 213
|| | || || ||||||||||| |||| |||||| | || || || ||||||||||| |
Sbjct 118 -AAGGTTC-TTGGAGAGATACTTAGTCGTAACTCGAACACGGAATATCTGAAACGGTTCG 175
Query 214 GTCTCAAGGGAT-TCACTGACCGGAAAGCATTTAAGACCAAAGTTCCGGTGGTTACCTAC 272
||| || || | | ||| ||||| | || |||| ||||||||||||||| | ||||
Sbjct 176 ATCTTAATGG-TGCCGTTGATAGGAAATCGTTCAAGAGCAAAGTTCCGGTGGTAATCTAC 234
Query 273 GATGATCTT-AA-ACCGGAGATTCAACGTATAGCCAATGGTGACCGGTCTATGATCTTGT 330
|| ||| || || | |||| |||||||||||| |||| ||||| || ||| ||||||||
Sbjct 235 GAAGAT-TTGAAGA-CGGATATTCAACGTATATCCAACGGTGATCGTTCTCCGATCTTGT 292
Query 331 CATCACACCCCATCACCGAGTTCCTCACAAGCTCTGGGACATCAGCTGGTGAAAGGAAGT 390
| || || |||||||||||||| |||||||||||||| ||||| ||||| || ||||| |
Sbjct 293 CTTCTCATCCCATCACCGAGTTTCTCACAAGCTCTGGAACATCTGCTGGCGAGAGGAAAT 352
Query 391 TGATGCCCACCATTGAAGAAGACATGGACCGACGTCAGCTTTTATACAGTCTTCTCATGC 450
| ||||| || |||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct 353 TAATGCCGACAATTGAAGAAGACATAAACCGACGTCAGCTTTTAGGCAATCTTCTCATGC 412
Query 451 CTGTGATGAATCTCTACGTGCCCGGATTAGACAAAGGCAA-GGCTCTATATTTTTTGTTC 509
|||||||||||||||||||||| ||||||||||||||||| || | |||| || || ||
Sbjct 413 CTGTGATGAATCTCTACGTGCCGGGATTAGACAAAGGCAAAGGTT-TATACTTCTTATTT 471
Query 510 GTGAAGACGGAATCGAAGACACCCGGTGGATTACCGGCACGTCCGGTTCTCACGAGTTAT 569
|||||| |||| || | |||| | ||||| |||||||| ||||| | |||||| |||||
Sbjct 472 GTGAAGTCGGAGTCTACGACATCAGGTGGGTTACCGGCTCGTCCAGCTCTCACTAGTTAC 531
Query 570 TACAAAAGCGAACAA-TTCAAGAGACGTCCTTACGATCC-GTACAACGTGTACACGAGCC 627
||||||||||| | | |||| | |||||| ||| | | ||| ||| ||||| || |
Sbjct 532 TACAAAAGCGA-CTACTTCA-G-GACGTCG----GATTCAG-ACAGCGTCTACACTAGTC 583
Query 628 CTAACGAAGCCATTCTTTG-TCCCGACTCGTCCCAAAGCATGTACACTCAGATGCTTTGT 686
|||| |||||||| || || | |||||||| ||||||||||| || || ||||| |||
Sbjct 584 CTAAGGAAGCCATCCTCTGCTGT-GACTCGTCTCAAAGCATGTATACGCAAATGCTATGT 642
Query 687 GGTCTCCTTA-TGCGTCACGAAGTCCTCCGTCTCGGTGCCGTCTT-CGCTTCCGGTCTCC 744
|||||| ||| |||| || ||||| ||| |||||||| || || | |||| |||||||
Sbjct 643 GGTCTC-TTAATGCGCCATGAAGTTAACCGACTCGGTGCGGTGTTTC-CTTCTGGTCTCC 700
Query 745 TCCGAGCCATAGGGTTCCTTCA-AACCAATTGGAAAGAACTCGC-CAACGATATCTCCAC 802
|||| |||||| | ||||| || ||| |||||||| ||||| | || |||||||| ||
Sbjct 701 TCCGTGCCATAAGCTTCCTCCAGAAC-AATTGGAAGGAACTTTCTCAG-GATATCTCAAC 758
Query 803 CGGTACCCTAAGTTC-AAGAATCTCTGATCCGGCTATTAAAGAGA-GCATGTCCAAGATC 860
||| ||||||||||| || ||||| ||||| || |||||| | | ||||| || ||
Sbjct 759 CGGGACCCTAAGTTCTAA-AATCTTTGATCATGCGATTAAA-ACTCGAATGTCGAATATT 816
Query 861 TTGACCAAACCGGACCAAGAACTGGCTGA-TTTCATAACTTCGG-TATGTG-GTCAAGAC 917
|||| |||||| || |||||||||||||| ||| | | | || | ||| | |||||
Sbjct 817 TTGAACAAACCTGATCAAGAACTGGCTGAGTTTT-TGA-TAGGGGTTTGTTCG-CAAGAG 873
Query 918 AATAATTGGGAAGGTATTATTACTAAGATTTGGCCTAACACTAAGTACCTTGACGTCATC 977
||| | ||||||| || || || ||||| ||||||||||| ||||||||||| || ||
Sbjct 874 AAT--T-GGGAAGGAATAATCACAAAGATATGGCCTAACACAAAGTACCTTGATGTGATT 930
Query 978 GTTACTGGAGCCATGGCTCAGTATATCCCGATGCTTG-AGTACTATAGCGGCGGGTTACC 1036
|||||||| || |||||| |||||||||| ||| ||| ||||||||||||| ||||||||
Sbjct 931 GTTACTGGTGCAATGGCTGAGTATATCCCAATG-TTGGAGTACTATAGCGGTGGGTTACC 989
Query 1037 GATGGCTTGCACGATGTATGCATCCTCCGAGAGTTACTTTGGGATCAACTTGAAA-CCAA 1095
||||| ||| ||| ||||| || ||||| |||||||| ||||| ||| | ||| || |
Sbjct 990 AATGGCAAGCATGATTTATGCTTCATCCGAAAGTTACTTCGGGATTAACCT-AAATCCGA 1048
Query 1096 TGTGTAAACCTTCTGAGGTTTCTTACACCAT-TATGCCAAACATGGCCTACTTCGAGTTT 1154
|||||||||| || |||||||||||||| || | | || ||||||||||||||||| ||
Sbjct 1049 TGTGTAAACCCTCGGAGGTTTCTTACACAATCT-TCCCCAACATGGCCTACTTCGAATTC 1107
Query 1155 CTCCCTCATGAAGTCCC-A---ACC-GGA--A--A-ATCCGA----ACTTGTAGAGCTAG 1200
||||| ||| || || | | | ||| | | | | | |||||| |||||||
Sbjct 1108 CTCCCACAT-AA-TCACGATGGAGATGGAGGAGTAGAAGCAACCTCACTTGTGGAGCTAG 1165
Query 1201 CTGATGTCGAGGTTGGGAAAG-AGTACGAGCTTGTGATCACAACCTATGCAGGGCT-TAA 1258
||||||| |||||||| |||| |||| || ||||||||||| ||||| || ||||| ||
Sbjct 1166 CTGATGTTGAGGTTGG-AAAGGAGTATGAACTTGTGATCACGACCTACGCGGGGCTCTA- 1223
Query 1259 CCGTTATAGAGTTGGTGATATTCTTCAAGTGACTGGATT-CTACAATTCCGCTCCACAGT 1317
|||||| |||||||| || ||||||| || || || || | | ||||||||||||||||
Sbjct 1224 CCGTTACAGAGTTGGCGACATTCTTCGTGTCACGGGGTTTC-ATAATTCCGCTCCACAGT 1282
Query 1318 TCAAGTTTGTGCGGAG-GAAAAACGTTTTGCTTAGCATTGAGTCGGATAAAACCGATGAA 1376
|||| || | ||||| || || |||||||| |||||||| || |||||||| || ||
Sbjct 1283 TCAAATTCATACGGAGAGAGAAT-GTTTTGCTAAGCATTGAATCTGATAAAACAGACGAG 1341
Query 1377 GCTGAGCTCCAAAAGGCGGTTGAGAATGCATCG-GTGTTACTTGGAGAGCAAGGAA-ATC 1434
||||| | |||||||| || |||||||| ||| | ||| |||| ||||||||||| | |
Sbjct 1342 GCTGATTTACAAAAGGCAGTGGAGAATGCGTCGAG-GTTGCTTGCAGAGCAAGGAACA-C 1399
Query 1435 GCGTGATCGAGTACACAAGCTACGCAGAGACAAAGACTATACCTGGCCATTATGTCATCT 1494
| ||||||||||| || ||||||||||| || |||||||||||||| ||||| || ||||
Sbjct 1400 GTGTGATCGAGTATACGAGCTACGCAGATACGAAGACTATACCTGGTCATTACGTAATCT 1459
Query 1495 ACTGGGAGTTTCTG-GT-GAAGGATCAAACCAAT-C-CA-CCAAATGACGAGGTCATGGC 1549
|||||||| | || || || | | |||| |||| | | || | |||||| ||||||||
Sbjct 1460 ACTGGGAGCTACTTAGTAGA-G-ACCAAAGCAATGCTCTTCCTAGTGACGAAGTCATGGC 1517
Query 1550 TCGGTGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGGTTGC 1609
| |||||| ||||| |||||||| ||| ||||| | || |||||||||||||||||| |
Sbjct 1518 TAAGTGCTGTTTGGAGATGGAGGAATCGCTGAACGCGGTTTATAGACAAAGTCGGGTTTC 1577
Query 1610 GGATAAGTCGATAGGGCCACTCGAGATACGTGTGGTGAAGAATGGAACGTTCGAGGAGCT 1669
||||| || || || || | ||||||||||||||| |||| || ||||| ||||||||
Sbjct 1578 AGATAAATCTATCGGTCCGTTGGAGATACGTGTGGTGCAGAACGGCACGTTTGAGGAGCT 1637
Query 1670 CATGGACTATGCCATCTCGAGAGGAGCCTCGATCAACCAGTACAAGGTGCCGCGGTGTGT 1729
|||||||| | ||||||||||||| | ||||| || ||||| ||||| ||| |||| ||
Sbjct 1638 CATGGACTTTTCCATCTCGAGAGGTTCATCGATTAATCAGTATAAGGTCCCGAGGTGCGT 1697
Query 1730 GAGTTTCACGCCAAT-AGTGGAGCTGCTTGACTCAAGGGTTGTATCTACACACTTCAGTC 1788
|| |||| || || | || | ||||||||||| || ||||| ||| | || ||||| |
Sbjct 1698 AAGCCTCACACCGATCA-TGAAACTGCTTGACTCTAGAGTTGTGTCTGCTCATTTCAGCC 1756
Query 1789 CAGCTTTGCCACATTGGTCACCAGAACGCCGT 1820
| | ||||| |||||||| |||||||| |||
Sbjct 1757 CTTCGTTGCCGCATTGGTCGCCAGAACGACGT 1788
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94126021875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5