BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481226
Length=888
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23600.1 | Symbols: ACL, ATMES2, MES2, ATME8, ME8 | acetone-... 1243 0.0
AT2G23590.1 | Symbols: ATMES8, MES8 | methyl esterase 8 | chr2:... 911 0.0
> AT2G23600.1 | Symbols: ACL, ATMES2, MES2, ATME8, ME8 | acetone-cyanohydrin
lyase | chr2:10042199-10043673 REVERSE LENGTH=950
Length=950
Score = 1243 bits (673), Expect = 0.0
Identities = 802/864 (93%), Gaps = 10/864 (1%)
Strand=Plus/Plus
Query 1 ATGAGTGAGGAGAAGAGGAAGCAACACTTCGTGCTAGTACATGGTATGTGTCACGGCGCG 60
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 33 ATGAGTGAGGAGAAGAGGAAGCAACACTTCGTGCTAGTACATGGTGCGTGCCACGGCGCA 92
Query 61 TGGTGCTGGTACAAGGTGAAGCCGCTGCTCGAGGCTTCAGGCCATCGTGTAACCGCCGTA 120
||||||||||||||||| ||||| || |||||||||| |||||||||||||||||| ||
Sbjct 93 TGGTGCTGGTACAAGGTTAAGCCTCTTCTCGAGGCTTTGGGCCATCGTGTAACCGCCTTA 152
Query 121 GACCTAGCTGCTTGCGGTATAGACACTACCAGGTCAATCACTGAAATTTCCACATGCGAA 180
||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||
Sbjct 153 GACCTAGCTGCTTCCGGTATAGACACAACCAGGTCAATCACTGACATTTCTACATGTGAA 212
Query 181 GAATATTCTAAGCCATTGATGCAGCTAATGACTTCATTGCCGAATGATGAGAAGGTTGTG 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 CAATATTCTGAGCCATTGATGCAGCTAATGACTTCATTGCCGAATGATGAGAAGGTTGTA 272
Query 241 CTCGTTGGTCATAGCTTCGGAGGTTTGAGTTTAGCCATAGCCATGGATAAGTTTCCAGAC 300
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||
Sbjct 273 CTCGTTGGTCATAGCTTTGGAGGTTTGAGTTTAGCCTTAGCCATGGATAAGTTTCCCGAT 332
Query 301 AAAATCTCTGTCTCTGTCTTCGTGACTGCTTTCATGCCTGACACCAAACACTCACCATCT 360
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 333 AAAATCTCTGTCTCTGTCTTCGTGACTGCATTCATGCCCGACACCAAACACTCACCATCG 392
Query 361 TTCGTCGAGGATAAGTTTGCAATAAGCAACATGACACCAGAAGGATGGATGGGCACTGAG 420
||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct 393 TTCGTCGAGGAAAAGTTTGC---AAGCAGCATGACACCAGAAGGATGGATGGGCTCTGAG 449
Query 421 CTCGAGACGTATGGTTCAGAGAATTCTGGCTTGTCTGTGTTATTCAGCACTGACTTCATG 480
|||||||| ||||||||||| ||||| |||||||||||||| |||||||| |||||||||
Sbjct 450 CTCGAGACATATGGTTCAGATAATTCCGGCTTGTCTGTGTTCTTCAGCACCGACTTCATG 509
Query 481 AAGCACCGTCTCTACCAACTTTGTCCTATTGAGGATCTTGAGCTTGGATTACTTCTAAAG 540
|||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||||
Sbjct 510 AAGCACCGTCTCTACCAACTTTCTCCTGTGGAGGATCTTGAGCTTGGATTGCTTCTAAAG 569
Query 541 AGGCCTGGATCATTGTTTATTAATGAATTATCGAGGGTGAAGAACTTTTCTGATG-AAGG 599
|||||| | ||||||||||||||||||||||||| | || ||||||||||||| | ||||
Sbjct 570 AGGCCTAGTTCATTGTTTATTAATGAATTATCGAAGATGGAGAACTTTTCTGA-GAAAGG 628
Query 600 GTATGGATCTGTTCCTCGAGCTTACATTGTGTGCAAAGAGGACAACATTATCTCGGAAGA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 GTATGGATCTGTTCCTCGAGCTTACATTGTGTGCAAAGAGGACAACATTATCTCGGAAGA 688
Query 660 ACATCAACGATGGATGATCGATAATTATCCGGCGAATTTAGTGATTGAGATGGAAGAGAC 719
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 689 CCATCAACGATGGATGATCCATAATTATCCGGCGAATTTAGTGATTGAGATGGAAGAGAC 748
Query 720 AGATCATATGCCAATGTTTTGCAAACCTCAACTACTAAGTGACCATCTATTGGAAATCGC 779
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 749 TGATCATATGCCAATGTTTTGCAAACCTCAACTACTAAGTGACCATCTATTGGCAATCGC 808
Query 780 CGACAAATTCTCTTAAATAATATTTTGATGAAAATGTATTTGGAGTTGATACATTAATCA 839
||||| |||| |||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct 809 TGACAATTTCTGTTAAATAATATTTTGATGAAAATGTATTTGGAGTGGATACA--A-TCA 865
Query 840 AGTGTGTGTTCTAAAATGGATCTT 863
| |||| | ||||||||||||||
Sbjct 866 AACGTGT-T-CTAAAATGGATCTT 887
> AT2G23590.1 | Symbols: ATMES8, MES8 | methyl esterase 8 | chr2:10034607-10036000
REVERSE LENGTH=834
Length=834
Score = 911 bits (493), Expect = 0.0
Identities = 702/797 (88%), Gaps = 38/797 (5%)
Strand=Plus/Plus
Query 3 GAGTGAGGAGAAGAGGAAGCAACACTTCGTGCTAGTACATGGTAT-GTGTCACGGCGCGT 61
||||||||||| || ||||||||| |||||||||||||||||| | ||| | ||||||||
Sbjct 72 GAGTGAGGAGATGATGAAGCAACATTTCGTGCTAGTACATGGT-TCGTGCCTCGGCGCGT 130
Query 62 GGTGCTGGTACAAGGTGAAGCCGCTGCTCGAGGCTTCAGGCCATCGTGTAACCGCCGTAG 121
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 131 GGTGCTGGTACAAGGTGAAGCCGCTGCTCGAGGCTTCGGGCCATCGTGTAACCGCCTTAG 190
Query 122 ACCTAGCTGCTTGCGGTATAGACACTACCAGGTCAATCACTGAAATTTCCACATGCGAAG 181
||||||||||||| ||||||||||| | ||||| |||||||| |||||||||||||||
Sbjct 191 ACCTAGCTGCTTGTGGTATAGACAC-A--AGGTCGATCACTGACATTTCCACATGCGAAC 247
Query 182 AATATTCTAAGCCATTGATGCAGCTAATGACTTCATTGCCGAATGATGAGAAGGTTGTGC 241
|||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 248 AATATTCTGAGCCGTTGATTCAGCTAATGACTTCATTGCCGAATGATGAGAAGGTTGTGC 307
Query 242 TCGTTGGTCATAGCT-TCGGAGGTTTGAGTTTAGCCATAGCCATGGATAAGTTTCCAGAC 300
|||| |||||||||| | |||||||||| ||||||||||||||||||||||||||| |||
Sbjct 308 TCGTGGGTCATAGCTAT-GGAGGTTTGACTTTAGCCATAGCCATGGATAAGTTTCCCGAC 366
Query 301 AAAATCTCTGTCTCTGTCTTCGTGACTGCTTTCATGCCTGACACCAAACACTCACCATCT 360
||||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||
Sbjct 367 AAAATCTCTGTCTCTGTCTTCGTAACTTCTTTCATGCCCGACACCAAAAACTCACCATCG 426
Query 361 TTCGTCGAGGATAAGTTTGCAATAAGCAACATGACACCAGAAGGAT-GGATGGGCACTGA 419
|||||| ||| |||||||||| ||| |||||||||||||| || |||||||| ||||
Sbjct 427 TTCGTCCTGGAAAAGTTTGCAA---GCACCATGACACCAGAAG-ATTGGATGGGCTCTGA 482
Query 420 GCTCGAGACGTATGGTTCAGAGAATTCTGGCTTGTCTGTGTTATTCAGCACTGACTTCAT 479
||||||| |||||| | | | | || | | | | || ||| ||||
Sbjct 483 GCTCGAGCCGTATG-T---G-G--T-CT---T---CAG-------C-GC--TGAGTTCAC 518
Query 480 GAAGCACCGTCTC-TACCAACTTTGTCCTATTGAGGATCTTGAGCTTGGATTACTTCTAA 538
|||||||||| || | |||||||| ||||||||| |||||||||||| |||| |||||||
Sbjct 519 GAAGCACCGTATCCT-CCAACTTTCTCCTATTGAAGATCTTGAGCTTAGATTGCTTCTAA 577
Query 539 AGAGGCCTGGATCATTGTTTATTAATGAATTATCGAGGGTGAAGAACTTTTCTGATGAAG 598
|||||||||| ||||| ||| ||||||| ||||||||| |||||||||||||||| |||
Sbjct 578 AGAGGCCTGGTTCATTATTTCTTAATGATTTATCGAGGATGAAGAACTTTTCTGAAAAAG 637
Query 599 GGTATGGATCTGTTCCTCGAGCTTACATTGTGTGCAAAGAGGACAACATTATCTCGGAAG 658
|||||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||
Sbjct 638 GGTATGGATCTGTTCCTCGAGCTTACATTGTGAGCAAAGATGACCACACCATCTCGGAAG 697
Query 659 AACATCAACGATGGATGATCGATAATTATCCGGCGAATTTAGTGATTGAGATGGAAGAGA 718
|| |||||||||||||||||||||| |||||| ||||||||||||| |||||||||| ||
Sbjct 698 AATATCAACGATGGATGATCGATAACTATCCGCCGAATTTAGTGATAGAGATGGAAGGGA 757
Query 719 CAGATCATATGCCAATGTTTTGCAAACCTCAACTACTAAGTGACCATCTATTGGAAATCG 778
| |||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 758 CGGATCATTTGCCATTGTTTTGCAAACCTCAACTACTAAGTGACCATCTATTGGCAATCG 817
Query 779 CCGACAAATTCTCTTAA 795
|||||||||||||||||
Sbjct 818 CCGACAAATTCTCTTAA 834
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 43352068861
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5