BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481229
Length=879
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23620.1 | Symbols: ATMES1, MES1 | methyl esterase 1 | chr2:... 1325 0.0
AT2G23600.1 | Symbols: ACL, ATMES2, MES2, ATME8, ME8 | acetone-... 761 0.0
> AT2G23620.1 | Symbols: ATMES1, MES1 | methyl esterase 1 | chr2:10047379-10049291
REVERSE LENGTH=918
Length=918
Score = 1325 bits (717), Expect = 0.0
Identities = 827/881 (94%), Gaps = 3/881 (0%)
Strand=Plus/Plus
Query 1 GAGAGTAAGAAAATATTGAAGGTCAGAAGAATGAGTGAGGAAAAGAGGAAACAACATTTT 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 14 GAGAGTAAGAAAATATCGAAGGTCAGAAGAATGAGTGAGGAAAAGAGGAAACAACATTTT 73
Query 61 GTACTAGTACATGGTTCGTGCCATGGCGCATGGTGCTGGTACAAGGTTAAGCCGCTGCTA 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 74 GTACTAGTACATGGTTCGTGCCATGGCGCGTGGTGCTGGTACAAGGTTAAGCCGCTGCTA 133
Query 121 GAGGCGTTGGGCCATCGTGTAACCGCTGTGGACTTAGCTGCTTCTGGTATAGACACAACC 180
|||||| ||||||| || ||||| ||||||||||||||||| || || |||||||||||
Sbjct 134 GAGGCGGTGGGCCACCGCGTAACTGCTGTGGACTTAGCTGCCTCCGGAATAGACACAACG 193
Query 181 AGGTCGATCACTGACATCCCTACATGCGAACAATACTCGGAGCCATTGTCGAAGCTGCTA 240
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||
Sbjct 194 AGGTCGATCACTGACATCCCCACATGCGAACAATACTCGGAGCCATTGACGAAGCTCCTG 253
Query 241 ACCTCATTGCCAAATGATGAGAAGGTTGTGCTCGTTGGTCATAGCTTTGGTGGCTTGAAC 300
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 254 ACCTCATTGCCAAATGATGAAAAGGTTGTGCTCGTTGGTCACAGCTTTGGTGGCTTGAAC 313
Query 301 TTAGCCATAGCCATGGAAAAGTTTCCCGACAAAATCTCTGTCGCTGTATTCTTGACTGCT 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 314 TTAGCCATAGCCATGGAAAAGTTTCCCGAAAAAATCTCTGTCGCTGTATTCTTGACTGCT 373
Query 361 TTCATGCCCGACACCGAACACTCACCATCCTTCGTCTTGGACAAGTTTGGAAGCAACATG 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 374 TTCATGCCGGACACCGAACACTCACCATCCTTCGTCTTGGACAAGTTTGGAAGCAACATG 433
Query 421 CCACCAGAAGCATGGATGGGCACGGAATTCGAACCGTACGGTTCAGACAATTCTGGACTG 480
|| | |||||||||||||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct 434 CCTCAAGAAGCATGGATGGGCACCGAATTCGAACCTTATGGTTCAGACAATTCCGGACTG 493
Query 481 AGTATGTTCTTTAGCCATGAGTTCATGAAGGTCGGTCTCTACCAGCTTTCTCCAGTTGAG 540
|||||||| ||||||| ||| ||||||||| | |||||||||||||||||||||||||||
Sbjct 494 AGTATGTTTTTTAGCCCTGACTTCATGAAGTTGGGTCTCTACCAGCTTTCTCCAGTTGAG 553
Query 541 GATCTTGAACTGGGATTACTTTTAAAGAGGCCAGGATCGTTATTTATTAACGATTTATCG 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 554 GATCTTGAACTGGGATTACTTTTAATGAGGCCAGGATCGTTATTTATTAACGATTTATCG 613
Query 601 AAGATGAAGAACTTCTCAGATGAAGGATATGGTTCTGTTCCTCGAGCTTTCATAGTGTGC 660
|||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||
Sbjct 614 AAGATGAAAAACTTCTCGGATGAAGGATATGGGTCTGTTCCTCGAGTTTTCATAGTGTGT 673
Query 661 AAAGAGGACAAAGCAATTCCAGAAGAACACCAAAGATGGATGATTGATAACTTTCCGGTG 720
|||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct 674 AAAGAGGACAAAGCAATTCCAGAAGAACGCCAGAGATGGATGATTGATAATTTTCCGGTG 733
Query 721 AATTTAGTGATTGAAATGGAAGAGACAGATCATATGCCAATGTTCTGCAAGCCTCAGCAA 780
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 734 AATTTAGTGATGGAGATGGAGGAGACAGATCATATGCCAATGTTCTGCAAGCCTCAGCAA 793
Query 781 CTCTGCGATCACTTCCTGGAAATCGCTGA-AAATTTTGTTTAATCAA-TCTTCTTGAAAA 838
||| | ||| |||||||| ||||||| || ||||| |||||||||| ||||| |||||
Sbjct 794 CTCAGTGATTACTTCCTGAAAATCGCGGACAAATTC-GTTTAATCAAATCTTCATGAAAC 852
Query 839 TATATTGGATTTGATATAATAAGGGTTTGTTGCAAATGAAT 879
| |||||||||||||||||||| ||||||||||||||||||
Sbjct 853 TGTATTGGATTTGATATAATAAAGGTTTGTTGCAAATGAAT 893
> AT2G23600.1 | Symbols: ACL, ATMES2, MES2, ATME8, ME8 | acetone-cyanohydrin
lyase | chr2:10042199-10043673 REVERSE LENGTH=950
Length=950
Score = 761 bits (412), Expect = 0.0
Identities = 705/844 (84%), Gaps = 29/844 (3%)
Strand=Plus/Plus
Query 31 ATGAGTGAGGAAAAGAGGAAACAACATTTTGTACTAGTACATGGTTCGTGCCATGGCGCA 90
||||||||||| |||||||| ||||| || || |||||||||||| ||||||| ||||||
Sbjct 33 ATGAGTGAGGAGAAGAGGAAGCAACACTTCGTGCTAGTACATGGTGCGTGCCACGGCGCA 92
Query 91 TGGTGCTGGTACAAGGTTAAGCCGCTGCTAGAGGCGTTGGGCCATCGTGTAACCGC-TGT 149
||||||||||||||||||||||| || || ||||| |||||||||||||||||||| | |
Sbjct 93 TGGTGCTGGTACAAGGTTAAGCCTCTTCTCGAGGCTTTGGGCCATCGTGTAACCGCCT-T 151
Query 150 GGACTTAGCTGCTTCTGGTATAGACACAACCAGGTCGATCACTGACATCCCTACATGCGA 209
||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||
Sbjct 152 AGACCTAGCTGCTTCCGGTATAGACACAACCAGGTCAATCACTGACATTTCTACATGTGA 211
Query 210 ACAATACTCGGAGCCATTG-TCGAAGCTGCTAACCTCATTGCCAAATGATGAGAAGGTTG 268
|||||| || ||||||||| | | |||| | || |||||||| ||||||||||||||||
Sbjct 212 ACAATATTCTGAGCCATTGAT-GCAGCTAATGACTTCATTGCCGAATGATGAGAAGGTTG 270
Query 269 TGCTCGTTGGTCATAGCTTTGGTGGCTTGAACTTAGCCATAGCCATGGAAAAGTTTCCCG 328
| |||||||||||||||||||| || |||| |||||| |||||||||| ||||||||||
Sbjct 271 TACTCGTTGGTCATAGCTTTGGAGGTTTGAGTTTAGCCTTAGCCATGGATAAGTTTCCCG 330
Query 329 ACAAAATCTCTGTCGCTGTATTCTTGACTGCTTTCATGCCCGACACCGAACACTCACCAT 388
| |||||||||||| |||| ||| ||||||| ||||||||||||||| ||||||||||||
Sbjct 331 ATAAAATCTCTGTCTCTGTCTTCGTGACTGCATTCATGCCCGACACCAAACACTCACCAT 390
Query 389 CCTTCGTCTTGGACAAGTTTGGAAGCAACATGCCACCAGAAGCATGGATGGGCACGGAAT 448
| |||||| ||| ||||||| ||||| |||| ||||||||| |||||||||| | ||
Sbjct 391 CGTTCGTCGAGGAAAAGTTTGCAAGCAGCATGACACCAGAAGGATGGATGGGCTCTGAGC 450
Query 449 TCGA-ACCGTACGGTTCAGACAATTCTGGACT-GAGTATGTTCTTTAGC-CATGAGTTCA 505
|||| || || |||||||| ||||| || || | | ||||||| ||| | || ||||
Sbjct 451 TCGAGACA-TATGGTTCAGATAATTCCGG-CTTGTCTGTGTTCTTCAGCACC-GACTTCA 507
Query 506 TGAAGGTCGGTCTCTACCAGCTTTCTCCAGTTGAGGATCTTGAACTGGGATTACTTTTAA 565
||||| | |||||||||| |||||||| || ||||||||||| || ||||| ||| |||
Sbjct 508 TGAAGCACCGTCTCTACCAACTTTCTCCTGTGGAGGATCTTGAGCTTGGATTGCTTCTAA 567
Query 566 AGAGGCC-AGGATCGTTATTTATTAACGATTTATCGAAGATGAAGAACTTCTCAGATGAA 624
||||||| || || || |||||||| || |||||||||||| ||||||| || || |||
Sbjct 568 AGAGGCCTAGT-TCATTGTTTATTAATGAATTATCGAAGATGGAGAACTTTTCTGA-GAA 625
Query 625 -GGATATGGTTCTGTTCCTCGAGCTTTCATAGTGTGCAAAGAGGACAAAGCAAT-TC-CA 681
|| ||||| |||||||||||||||| ||| ||||||||||||||||| || | || |
Sbjct 626 AGGGTATGGATCTGTTCCTCGAGCTTACATTGTGTGCAAAGAGGACAA--CATTATCTCG 683
Query 682 GAAGAACACCAAAGATGGATGATTGATAACTT-TCCGGTGAATTTAGTGATTGAAATGGA 740
||||| || ||| |||||||||| |||| || ||||| ||||||||||||||| |||||
Sbjct 684 GAAGACCATCAACGATGGATGATCCATAA-TTATCCGGCGAATTTAGTGATTGAGATGGA 742
Query 741 AGAGACAGATCATATGCCAATGTTCTGCAAGCCTCAGCAACTCTGCGATCA-CT-TCCTG 798
|||||| ||||||||||||||||| ||||| ||||| | ||| | || || || | ||
Sbjct 743 AGAGACTGATCATATGCCAATGTTTTGCAAACCTCAACTACTAAGTGACCATCTAT--TG 800
Query 799 GAAATCGCTGAAAATTT-TGTTTAATCAATCTTCT--TGAAAATATATT-GGATTTGATA 854
| ||||||||| ||||| |||| ||| ||| || | ||||||| |||| ||| | ||||
Sbjct 801 GCAATCGCTGACAATTTCTGTTAAAT-AATATTTTGATGAAAATGTATTTGGAGTGGATA 859
Query 855 TAAT 858
|||
Sbjct 860 CAAT 863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42899961538
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5