BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481235
Length=4535
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23740.2 | Symbols: | nucleic acid binding;sequence-specifi... 6756 0.0
AT2G23755.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 359 1e-97
> AT2G23740.2 | Symbols: | nucleic acid binding;sequence-specific
DNA binding transcription factors;zinc ion binding | chr2:10097559-10103319
FORWARD LENGTH=4540
Length=4540
Score = 6756 bits (3658), Expect = 0.0
Identities = 4257/4535 (94%), Gaps = 85/4535 (2%)
Strand=Plus/Plus
Query 1 ttttttttttttGTTGGTTCTTCTTCCGTGACCTAGCCTTTGATTCCGCCATGTCTGTTT 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21 TTTTTTTTTTTCGTTGGTTCTTCTTCCGTGACCTAGCCTTTGATTCCGCCATGTCTGTTT 80
Query 61 CCATGT-GT-A-TCCTAACAAGTTATTGTGTTACCTGA------C-C-------TT---- 99
|||| | | | |||||||||||||||||||||||||| | | ||
Sbjct 81 CCATATCCTAAGTCCTAACAAGTTATTGTGTTACCTGACCTTCTCTCATAGTTATTAAAA 140
Query 100 ACCCAAATGTTAAACTTTCTTTGTTTTGTGGCAGCATTTTAACATTTTTTGGTCACCTCC 159
|||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||
Sbjct 141 ACCCAAATGTTAAA-GTT-TTTGTTTTGTGGCAGCATTTTAACA-TTTTTGGTCACCTCC 197
Query 160 ACCTGGGTTTGTTGATTGGTCATGTTATTGATCTTCAATTTGAATTGTGTGATTT-TATC 218
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 198 ACCTGGGTTTGTTGATTGGTCATGTTATTGATCTTCAATTTGAATTGTGTG-TTTGTATC 256
Query 219 AAATCCTGGGTTTAAAGAAGTGAAGTATCTTCTAAGTGGTGATTTATGGAAGTTGTAATG 278
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 257 AAATCCTGGGTTTAAAGAAGTGAAATATCTTCTAAGTGGTGATTTATGGAAGTTAAAATG 316
Query 279 GATGAATTGGTTCTTGACGTGGATGTTGAGGAGGCAACTGGTAGTGAATTGTTGGTGAAA 338
||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct 317 GATGAGTTGGTTCTTGACGTGGATGTTGAGGAAGCAACAGGTAGTGAGTTGTTGGTGAAA 376
Query 339 CCTGAGCCTGG-TGATGATTTCAATGCGGTGAAG-CGTAGTACCGATTTAGTTACGGTAA 396
||||||| || | |||||| |||||||||||| | ||||||||||||||| ||||
Sbjct 377 TCTGAGCC-GGAGGCTGATTTAAATGCGGTGAAGTC-TAGTACCGATTTAGTCACGG--- 431
Query 397 TTACCGGACCTATTGGTAATAATGGCGAAGGCGAGTCCTCTCCTTCTGAGCCCAAATGGC 456
||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||
Sbjct 432 TTACCGGACCTATTGGTAAAAATGGCGAAGGCGAGTCGTCACCTTCTGAGCCTAAATGGC 491
Query 457 TGCAAGAAGATGAACCTATAGCTTTGTGGGTGAAGTGGAGAGGTAAATGGCAGGCTGGAA 516
||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 492 TGCAACAAGATGAACCAATAGCTTTGTGGGTGAAGTGGAGAGGTAAATGGCAAGCTGGAA 551
Query 517 TCAGATGTGCGAAAGCGGACTGGCCATTGACAACTTTGAGAGGGAAACCAACTCATGATA 576
| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 552 TAAGATGTGCGAAAGCGGACTGGCCATTGACGACTTTAAGAGGCAAACCAACTCATGATA 611
Query 577 GGAAAAAGTATTGTGTGAtttttttCCCGCATACGAAAAACTACTCGTGGGCGGATATGC 636
|||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 612 GGAAGAAGTATTGTGTGATTTTTTTTCCGCATACGAAAAATTACTCGTGGGCGGATATGC 671
Query 637 AGCTTGTTCGATCCATCAATGAGTTTCCTGATCCTATTGCATATAAGTCACACAAAATTG 696
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct 672 AGCTTGTTCGATCCATCAATGAGTTTCCTGATCCTATTGCTTATAAGTCTCACAAGATTG 731
Query 697 GACTTAAATTGGTTAAAGATTTAACTGCTGCTCGACGCTACATTATGAGGAAGCTTACTG 756
||||||| || ||||||||||||||||||||| ||||||| |||||| |||||||||| |
Sbjct 732 GACTTAAGTTAGTTAAAGATTTAACTGCTGCTAGACGCTATATTATGCGGAAGCTTACAG 791
Query 757 TTGGGATTTTCAATATAGTTGACCAATTCCCCTCAGAGGTTGTTTCTGAAGCAGCTAGGG 816
||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 792 TTGGGATGTTCAATATAGTTGACCAGTTCCCTTCAGAGGTTGTTTCTGAAGCAGCTAGGG 851
Query 817 ATATTATAATCTGGAAAGAATTTGCAATGGAGGCTACTAGAAGCACAAGTTATCATGATC 876
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 852 ATATTATAATCTGGAAAGAATTTGCAATGGAAGCTACTAGAAGCACAAGTTATCATGATC 911
Query 877 TTGGGATAATGCTTGTGAAGCTTCACAGTATGATTTTGCAACGATACATGGATCCGATCT 936
||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 912 TTGGGATAATGCTTGTGAAGCTTCATAGCATGATTTTGCAACGATACATGGATCCAATCT 971
Query 937 GGCTTGAGAACTCGTTTCCTTTGTGGGTACAAAAATGTAACAATGCAGTGAATGCCGAGA 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 972 GGCTTGAGAACTCGTTTCCTTTGTGGGTACAAAAATGTAACAATGCAGTGAATGCAGAGA 1031
Query 997 GTATTGAATTACTGAATGA-G----TG------G-----A---G--TGAAGTCAAATCAC 1035
|||||||||| |||||||| | || | | | ||||||||||||||
Sbjct 1032 GTATTGAATTGCTGAATGAGGAATTTGACAATTGTATCAAGTGGAATGAAGTCAAATCAC 1091
Query 1036 TTTCTGAGTCTCCAATGCAACCGATGTTGTTGTCAGAATGGAAAACGTGGAAGCATGACA 1095
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1092 TTTCTGAGTCTCCAATGCAACCAATGTTGTTGTCAGAATGGAAAACGTGGAAGCATGACA 1151
Query 1096 TTGCGAAATGGTTCTCGATATCTCGCCGTGGTGTTGGCGAAATAGCACAGCCGAATAGTA 1155
|||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1152 TTGCAAAATGGTTCTCTATATCTCGCCGTGGTGTTGGCGAAATAGCACAGCCGGATAGTA 1211
Query 1156 AAAGTGTGTTTAACTCAGATGTCCAGGCTAGCCGTAAAAGACCAAAACTTGAGATTCGAC 1215
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1212 AAAGTGTGTTTAACTCAGATGTCCAGGCTAGTCGTAAAAGACCAAAACTTGAGATTCGAC 1271
Query 1216 GAGCAGAGACGACAAATGCATCACAGATGGAGTCTGATACGTCACCACAAGGATTGA-CT 1274
| |||||||| ||||||||| |||| |||||||||||||| || ||||||||||| | ||
Sbjct 1272 GTGCAGAGACAACAAATGCAACACATATGGAGTCTGATACTTCGCCACAAGGATT-ATCT 1330
Query 1275 GCAATTGACTCGGAATTCTTT-AGTTCTCGAGGCAACACTAATACTCCTGAGGCGGTGAA 1333
||||||||||| || || ||| ||||||||||||||||| ||| |||||||| || ||||
Sbjct 1331 GCAATTGACTCAGAGTT-TTTCAGTTCTCGAGGCAACACAAATTCTCCTGAGACGATGAA 1389
Query 1334 AGATGAAAA-CCCGATAATGAATACACCGGAGAATGGTTTGGATCTATGGGATGGCATTG 1392
||| ||||| || | ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1390 AGAAGAAAATCCTG-TAATGAATACACCAGAGAATGGTTTGGATCTATGGGATGGCATTG 1448
Query 1393 TTGTTGAAGCAGGTGGTTCACAGATCATGAAAACAAAAGAAACTAATGGATTGTCTCA-C 1451
||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |
Sbjct 1449 TTGTTGAAGCAGGTGGTTCACAGTTCATGAAGACAAAAGAAACTAATGGACTGTCTCACC 1508
Query 1452 C-C---A-C-ACAT-T-AACGAATCAGTTTTGAAGAAACCATTTGGTTCAGGAAATAAGA 1503
| | | | |||| | || ||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1509 CGCAAGACCAACATATAAATGAATCAGTTCTGAAGAAACCATTTGGTTCGGGAAATAAGA 1568
Query 1504 GTCAGCAATGCATAGCTTTCATTGAATCGAAAGGAAGGCAATGTGTGAGGTGGGCGAATG 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1569 GTCAGCAATGCATAGCTTTCATTGAATCGAAAGGAAGGCAATGTGTGAGGTGGGCGAATG 1628
Query 1564 AAGGTGATGTTTATTGTTGTGTGCATTTAGCTTCTCGTTTCACCACCAAATCTGCAAAGA 1623
||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||
Sbjct 1629 AAGGTGATGTTTATTGTTGCGTGCATTTAGCTTCTCGTTTCACCACAAAATCTATGAAGA 1688
Query 1624 ACGAGGGCTCTCCTGCAGTTGAAGCACCAATGTGCGGAGGAGTTACTGTTCTTGGTACCA 1683
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1689 ACGAGGGCTCTCCTGCTGTTGAAGCACCTATGTGCGGAGGGGTTACTGTTCTTGGTACCA 1748
Query 1684 AATGCAAGCACCGATCTCTACCCGGGTTTTTGTACTGCAAGAAACACCGCCCTCATTCAG 1743
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1749 AATGCAAGCACCGATCTCTACCCGGGTTTTTGTACTGCAAGAAACACCGTCCTCATACAG 1808
Query 1744 AGATGGAGAAACCTGATGATTCTTCATCTCTTCTGGTGAAGAGAAAGGTAGCGGAAATTA 1803
||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1809 GGATGGTGAAACCTGATGATTCTTCATCTTTTCTGGTGAAGAGAAAGGTATCGGAAATTA 1868
Query 1804 TGTCAACCTTAGAAACAAATCAATGTCAAGATTTGGTGCCGTTTGGAGAACCAGAAGGTC 1863
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1869 TGTCAACATTAGAAACAAATCAATGTCAAGATTTGGTGCCGTTTGGAGAACCAGAAGGTC 1928
Query 1864 TATCTTTCGAGAAACAGGAGCCCCATGGAGCCACGAGCTTCACTGAGATGTTTGAACATT 1923
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1929 CATCTTTTGAGAAACAGGAGCCCCATGGAGCCACGAGCTTCACGGAGATGTTTGAACATT 1988
Query 1924 GTAGCCAAGAGGATAACTTGTGTATAGGTTCTTGCTCAGAAAACAGCTATATTCCTTGCA 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1989 GTAGCCAAGAGGATAACTTGTGTATAGGTTCTTGCTCAGAAAACAGCTATATTTCTTGCA 2048
Query 1984 GTGAGTTCTCGACAAAGCACTCGTTATACTGTGAACAGCACCTTCCTAACTGGCTTAAGC 2043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2049 GTGAGTTCTCGACAAAGCACTCGTTATACTGTGAACAGCACCTTCCTAACTGGCTTAAGC 2108
Query 2044 GTGCGAGGAATGGTAAGAGTCGAATAATATCAAAGGAAGTCTTTGTAGATCTCTTAAGGG 2103
|||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 2109 GTGCAAGGAATGGTAAGAGTCGAATAATATCGAAGGAAGTGTTTGTAGATCTCTTAAGGG 2168
Query 2104 GTTGTTTATCGCGTGAGGAAAAATTAGCTCTACATCAAGCTTGTGATATTTTCTACAAGC 2163
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 2169 GTTGTTTATCGCGTGAGGAAAAGTTGGCTCTACATCAAGCTTGTGATATTTTCTACAAGC 2228
Query 2164 TCTTCAAAAGTGTCTTATCTTTAAGAAACTCTGTGCCAATGGAGGTACAGATTGATTGGG 2223
||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||
Sbjct 2229 TCTTCAAAAGTGTCTTATCGTTAAGAAACTCTGTCCCAATGGAAGTACAGATCGACTGGG 2288
Query 2224 CGAAAGCAGAAGCTTCAAGAAACGCGGACGTTGGAGTTGGGGAATTCTTGATGAAGTTGA 2283
||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct 2289 CGAAAACAGAAGCTTCAAGAAACGCTGACGCTGGAGTTGGAGAATTCTTGATGAAGTTGG 2348
Query 2284 TATCCAATGAAAGGGAGAGATTAACTAGGATATGGGGTTTCCCTACTGGTGCTGATGAAG 2343
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2349 TATCCAATGAAAGAGAGAGATTAACTAGGATATGGGGTTTCGCTACTGGTGCTGATGAAG 2408
Query 2344 AAGATGTATCATTATCAGAATATCCTAATCGACTGCTTGCCATCACCAATGCCTGGGCGG 2403
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |
Sbjct 2409 AAGATGTATCATTATCAGAATATCCTAATCGACTACTTGCCATCACCAATACCTGTGATG 2468
Query 2404 ATGATGAAGACAAAGAGAAATGGTCTTTTAGTGGATTTGCTTGTGCTATTTGCTTAGATT 2463
||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2469 ATGATGATGATAAAGAGAAATGGTCGTTTAGTGGATTTGCTTGTGCTATTTGCTTAGATT 2528
Query 2464 CTTTTGTGAAG-AGAAAGCTTTTGGAAATTCATGTGGAGGAGAGGCATCACGTGCAGTTT 2522
|||||||| || |||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 2529 CTTTTGTG-AGAAGAAAGCTTTTGGAAATTCATGTGGAGGAGCGACATCACGTGCAGTTT 2587
Query 2523 GCGGAAAAGTGTATGCTTCTTCAGTGTATTCCTTGTGGCAGTCATTTTGGAGATAAAGAA 2582
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2588 GCGGAAAAGTGTATGCTTCTTCAGTGTATTCCTTGTGGCAGCCATTTTGGAGATAAAGAA 2647
Query 2583 CAGTTGCTGTTACATGTGCAAGCTGTGCATCCTTCTGAGTGCAAATCGCTAACGGTTGCT 2642
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2648 CAGTTGCTGGTACATGTGCAAGCTGTGCATCCTTCTGAGTGCAAATCGCTAACCGTTGCT 2707
Query 2643 TCTGAGTGCAATTTGACTAATGGTGAGTCTTCTCAGAAACCTGAAGCAGGCAGTTCACAA 2702
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2708 TCTGAATGCAATTTGACTAATGGTGAGTTTTCTCAGAAACCTGAAGCAGGCAGTTCACAA 2767
Query 2703 ATTGTTGTGAGCCAAAACAACGAGAATACAAGCGGCGTACATAAATTTGTTTGCAAGTTC 2762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2768 ATTGTTGTGAGCCAAAACAACGAGAATACAAGCGGCGTACATAAATTTGTTTGCAAGTTC 2827
Query 2763 TGTGGGCTGAAATTCAATTTATTACCTGACCTAGGCCGTCACCATCAAGCTGAACACATG 2822
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2828 TGTGGGCTGAAATTCAATTTATTACCTGACCTTGGCCGTCACCATCAAGCTGAACACATG 2887
Query 2823 GGATCGAGTCTAGTTGGCTCTCGTGGTCCGAAGAAAGGAATAAGGTTTAATACATACAGG 2882
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2888 GGACCGAGTCTAGTTGGCTCTCGTGGTCCGAAGAAAGGAATAAGGTTTAATACATATAGG 2947
Query 2883 ATGAAATCTGGTAGGCTTAGTCGTCCGAATAAATTCAAGAAAAGTCTTGGAGCAGTCTCA 2942
|||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct 2948 ATGAAATCTGGTAGGCTTAGTCGTCCAAATAAATTCAAAAAAAGTCTTGGAGCTGTCTCA 3007
Query 2943 TATAGGATTAGAAACCGGGCTGGTGTAAATATGAAGAGGAGGATGCAAGGTTCTAAACCG 3002
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3008 TATAGGATTAGAAATAGGGCTGGTGTAAATATGAAGAGGAGGATGCAAGGTTCTAAATCG 3067
Query 3003 CTCAGCACGGAAGGAAACACTGGAG-T--A-TCGCCGCCGCCTCCGGGTGATAGTAGAAA 3058
||| |||| ||||||||||||| || | | | | |||||||| || ||||||||||||
Sbjct 3068 CTCGGCACAGAAGGAAACACTGAAGCTGGAGTATC-GCCGCCTCTGGATGATAGTAGAAA 3126
Query 3059 CTTTGATGG--TA-CAGATGCTCATTGCTCTGTGGTTTCGAATATATTGTTGTCAAAGGT 3115
||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3127 CTTTGATGGCGTAACAGATGCTCATTGCTCTGTGGTTTCGGATATATTGTTGTCAAAGGT 3186
Query 3116 TCAGAAAGCGAAGCATCGCCCTAATAACTTTGATATCCTGTCTGCTGCTCGATCGGCTTG 3175
||||||||| || |||||||| |||||| | ||||||||||||||||||||||| |||||
Sbjct 3187 TCAGAAAGCAAAACATCGCCCCAATAACCTCGATATCCTGTCTGCTGCTCGATCAGCTTG 3246
Query 3176 CTGTAGGGTGAGCCTTGAGACCTCTTTGGAGGCTAAATTCGGGGATTTGCCTGACCGGAT 3235
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3247 CTGTAGGGTGAGCGTTGAGACCTCTTTGGAGGCTAAATTCGGTGATTTGCCTGACCGGAT 3306
Query 3236 ATATCTCAAGGCAGCAAAACTTTGCGGTGAGCAAGGTGTACAAGTGCAATGGCATCAGGA 3295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3307 ATATCTCAAGGCAGCAAAACTTTGCGGTGAGCAAGGTGTACAAGTGCAATGGCATCAGGA 3366
Query 3296 AGGATACATATGCTCTAACAGATGTAAGCCTGTTAAAGACCCAAATCTTCTACGTCCCTT 3355
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 3367 AGGATACATATGCTCTAACGGATGTAAGCCTGTTAAAGACCCAAATCTTCTACATCCCTT 3426
Query 3356 GATCCCTCGACAAGAGAATGATCGATTCGGGATATCTATGGACCCTGGACAACATTCTAA 3415
|||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 3427 GATCCCGCGACAAGAGAATGATCGATTCGGGATAGCTGTGGACGCTGGACAACATTCTAA 3486
Query 3416 TATCGAGTTGGAAGTTGATGAGTGCCATTGTATCATGGAGGCTCATCATTTTAGTAAGAG 3475
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3487 TATTGAGTTGGAAGTTGATGAGTGCCATTGTATCATGGAGGCTCATCATTTTAGTAAGAG 3546
Query 3476 ACCATTTGGAAACACCGCGGTTTTGTGCAAGGACATAAGCTTTGGTAAGGAATCAGTTCC 3535
||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3547 ACCGTTTGGAAACACTGCGGTTTTGTGCAAGGACATCAGCTTTGGTAAGGAATCAGTTCC 3606
Query 3536 AATTTGTGTCGTCGATGATGATCTTTTGAATTCTGGAAAGCAGCATGAGAGGCCTTGGGA 3595
|||||||||||||||||||||||||| |||||||| ||| | | |||||| |||||||||
Sbjct 3607 AATTTGTGTCGTCGATGATGATCTTTGGAATTCTGAAAAACCGTATGAGATGCCTTGGGA 3666
Query 3596 AAGCTTTACTTATATTACAAACTCAATACTTCATCCGTCAATGGAACTTGTAAAGGAGAA 3655
| ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 3667 ATGCTTTACTTATGTTACAAACTCAATTCTTCATCCGTCAATGGATCTTGTAAAGGAGAA 3726
Query 3656 TCTGCAACTCAGATGTGGCTGTCGCAGTTCAGTGTGCTCGCCTGTAACTTGTGATCACGT 3715
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3727 TCTGCAACTCAGGTGTAGCTGTCGCAGTTCAGTGTGCTCGCCTGTAACTTGTGATCACGT 3786
Query 3716 ATACCTTTTTGGTAACGATTTTGAGGACGCTAGAGACATATATGGAAAATCCATGAGGTT 3775
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3787 ATACCTTTTCGGTAACGATTTTGAGGACGCTAGAGACATATATGGAAAATCCATGAGGTG 3846
Query 3776 TAGATTCCCATATGATGGCAAACAACGGATCATCTTGGAGGAGGGTTATCCTGTTTATGA 3835
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3847 TAGATTCCCATATGATGGCAAACAACGTATCATCTTGGAGGAGGGTTATCCTGTTTATGA 3906
Query 3836 ATGCAATAAGTTCTGTGGATGCTCTAGAACATGTCAGAATCGGGTTTTGCAGAATGGAAT 3895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3907 ATGCAATAAGTTCTGTGGATGCTCTAGAACATGTCAGAATCGGGTTTTGCAGAATGGAAT 3966
Query 3896 TCGCGTGAAACTAGAAGTTTTTAGAACTGAAAGCAAGGGATGGGGATTGCGAGCTTGTGA 3955
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3967 TCGCGCGAAACTAGAAGTTTTTAGAACTGAAAGCAAGGGATGGGGATTGCGAGCTTGTGA 4026
Query 3956 ACATATACTGCGTGGCACATTTGTTTGCGAATACATTGGGGAGGTTCTTGATCAGCAAGA 4015
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4027 ACATATACTGCGTGGCACATTTGTTTGCGAATACATCGGGGAGGTTCTTGATCAGCAAGA 4086
Query 4016 AGCAAACAAGAGGCGAAACCAGTATGGAAAAGAAGGTTGCAGCTACTTACTGGACATTGA 4075
|||||||||||||||||||||||||||||| | || |||||||||| |||||||||||||
Sbjct 4087 AGCAAACAAGAGGCGAAACCAGTATGGAAATGGAGATTGCAGCTACATACTGGACATTGA 4146
Query 4076 TGCTAATATCAACGACATCGGTAGATTGATGGAAGAAGAGCCCGATTATGCTATTGATGC 4135
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 4147 CGCTAATATCAACGACATAGGTAGATTGATGGAAGAAGAGCTCGATTATGCTATTGATGC 4206
Query 4136 TACTACTCATGGCAACATCTCTCGATACATCAATCACAGCTGCTCACCAAATCTCGTTAA 4195
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 4207 TACTACTCATGGCAACATCTCTCGATTCATCAATCACAGCTGCTCACCAAATCTCGTTAA 4266
Query 4196 TCACCAAGTTATTGTGGAAAGCATGGAGTCCCCGCTCGCTCATATCGGTCTATACGCCAG 4255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4267 TCACCAAGTTATTGTGGAAAGCATGGAGTCCCCGCTCGCTCATATCGGTCTATACGCCAG 4326
Query 4256 TATGGATGTTGCTGCAGGAGAAGAGATCACCCGAGACTATGGATGCAGACCGGTACCAAC 4315
||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 4327 TATGGATATAGCTGCAGGAGAAGAGATCACCCGAGACTATGGACGCAGACCGGTACCATC 4386
Query 4316 TGGACAAGAAAATGAGCATCCATGCCATTGTAAAGCAACTAATTGCAGAGGTCTCTTAAG 4375
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4387 TGAACAAGAAAATGAGCATCCATGCCATTGTAAAGCAACTAATTGCAGAGGTCTCTTAAG 4446
Query 4376 TTAGATTTTGGTTCCTAGGAACATTctttgcagatttgttttaataattttccttca-ga 4434
|||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct 4447 TTAGATTTTGGTTCTTAGGAACATTCTTTGCAGATCTGTTTTGATAATTTTCCTTCAAGA 4506
Query 4435 ctttttacctttttt-cccttgaatcttt-agaca 4467
|||||| |||||| ||||||||||||| |||||
Sbjct 4507 CTTTTT---TTTTTTGCCCTTGAATCTTTTAGACA 4538
> AT2G23755.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:10102787-10104029
REVERSE LENGTH=1085
Length=1085
Score = 359 bits (194), Expect = 1e-97
Identities = 229/245 (93%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 4266 GCTGCAGGAGAAGAGATCACCCGAGACTATGGATGCAGACCGGTACCAACTGGACAAGAA 4325
||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||
Sbjct 756 GCTGCAGGAGAAGAGATCACCCGAGACTATGGACGCAGACCGGTACCATCTGAACAAGAA 697
Query 4326 AATGAGCATCCATGCCATTGTAAAGCAACTAATTGCAGAGGTCTCTTAAGTTAGATTTTG 4385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 696 AATGAGCATCCATGCCATTGTAAAGCAACTAATTGCAGAGGTCTCTTAAGTTAGATTTTG 637
Query 4386 GTTCCTAGGAACATTctttgcagatttgttttaataattttccttca-gactttttacct 4444
|||| |||||||||||||||||||| |||||| |||||||||||||| |||||||| |
Sbjct 636 GTTCTTAGGAACATTCTTTGCAGATCTGTTTTGATAATTTTCCTTCAAGACTTTTT---T 580
Query 4445 ttttt-cccttgaatcttt-agacagctttGGAACTATTCATTTTCCTTCAAGCTTGTGA 4502
||||| ||||||||||||| ||||| ||||||||||||| || ||||||||||||||| |
Sbjct 579 TTTTTGCCCTTGAATCTTTTAGACACCTTTGGAACTATTGATCTTCCTTCAAGCTTGTAA 520
Query 4503 CTTTT 4507
|||||
Sbjct 519 CTTTT 515
Score = 171 bits (92), Expect = 7e-41
Identities = 97/99 (98%), Gaps = 1/99 (1%)
Strand=Plus/Minus
Query 4167 AATCAC-AGCTGCTCACCAAATCTCGTTAATCACCAAGTTATTGTGGAAAGCATGGAGTC 4225
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 AATCTCTAGCTGCTCACCAAATCTCGTTAATCACCAAGTTATTGTGGAAAGCATGGAGTC 885
Query 4226 CCCGCTCGCTCATATCGGTCTATACGCCAGTATGGATGT 4264
|||||||||||||||||||||||||||||||||||||||
Sbjct 884 CCCGCTCGCTCATATCGGTCTATACGCCAGTATGGATGT 846
Score = 122 bits (66), Expect = 2e-26
Identities = 70/72 (97%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 4103 GATGGAAGAAGAGCCCGATTATGCTATTGATGCTACTACTCATGGCAACATCTCTCGATA 4162
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1085 GATGGAAGAAGAGCTCGATTATGCTATTGATGCTACTACTCATGGCAACATCTCTCGATT 1026
Query 4163 CATCAATCACAG 4174
||||||||||||
Sbjct 1025 CATCAATCACAG 1014
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 226152579044
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5