BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481274
Length=1010
Score E
Sequences producing significant alignments: (Bits) Value
AT2G24190.2 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1417 0.0
AT3G61220.2 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1092 0.0
> AT2G24190.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:10283621-10284980 REVERSE LENGTH=1071
Length=1071
Score = 1417 bits (767), Expect = 0.0
Identities = 909/978 (93%), Gaps = 7/978 (1%)
Strand=Plus/Plus
Query 1 ACAATTCGTTTGAAACATT-TTGTCTGAACTGAAACCCAG-AAAAAATGTCTGAGGAAAC 58
||| ||||||||||||||| ||||||||||| ||||| || |||||||| |||||||| |
Sbjct 1 ACATTTCGTTTGAAACATTCTTGTCTGAACTAAAACCTAGAAAAAAATGGCTGAGGAATC 60
Query 59 ACCAAGTTCTGGGTTTTGTAGATATGCTATAGTTACTGGAGGGAATAGAGGAATTGGATT 118
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ACCAAGTTCTGGCCTTTGTAGATATGCTATAGTTACTGGAGGGAATAGAGGAATTGGATT 120
Query 119 TGAGATATGCAGACAATTAGCAAACCAAGGGATTAGGGTTGTTCTGACATCTAGAGATGA 178
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 121 TGAGATATGCAGACAATTAGCAAACAAAGGGATTAGGGTTATTTTGACATCTAGAGATGA 180
Query 179 -AAG-AAGAGGACTTGAAGCTGTTGAGACATTGAAGAAAGAGCTTGGGATTTCTGATCAA 236
|| ||| || |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 GAAACAAG-GG-CTTGAAGCTGTTGAGACATTGAAGAAAGAGCTTGAGATTTCTGATCAA 238
Query 237 AGCACTGTCTTTCATCAGCTTGATGTCTCTGATCCAGCTAGTATCTCATCTCTTGCTGAG 296
|||| |||||||||||||||||||||||||||||| | |||| || | ||||||||||||
Sbjct 239 AGCATTGTCTTTCATCAGCTTGATGTCTCTGATCCTGTTAGTGTCACTTCTCTTGCTGAG 298
Query 297 TTTGTGAAAACCCAATTCGGAAAACTCGATATCTTGATTAATAATGCAGGGGTTGGTGGT 356
|||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 299 TTTGTGAAAACCCATTTCGGAAAACTCGATATCTTGATCAATAATGCTGGGGTTGGTGGT 358
Query 357 GTAATCACTGATGTTGATGCTTTAAGAGCTGGGACTGGGAAAGAAGGTTTCAAATGGGAG 416
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 359 GTAATCACTGATGTTGATGCTTTAAGAGCTGGGACAGGGAAAGAAGGTTTCAAGTGGGAG 418
Query 417 GAAACTATCACAGAGACGTATGAGCTAGCTGAAGAATGCATCAAGATTAACTGTTATGGA 476
||||||||||| ||||| |||||||||||||| |||||||| |||||||||| |||||||
Sbjct 419 GAAACTATCACTGAGACTTATGAGCTAGCTGAGGAATGCATAAAGATTAACTATTATGGA 478
Query 477 CCAAAGAGAATGTGTGAGTCGTTTATTCCTCTTTTGCAGTTATCTGATTCTCCAAGAATC 536
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 479 CCAAAGAGAATGTGTGAGGCGTTTATTCCACTTTTGCAGTTATCTGATTCTCCAAGAATC 538
Query 537 GTTAATGTATCATCATTCATGGGTCAACTAAAGAATTTACTAAACGAATGGGCAAAAGGG 596
|||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 539 ATTAACGTATCATCCTTCATGGGTCAAGTAAAGAATTTAGTAAACGAATGGGCAAAAGGG 598
Query 597 ATCCTGAGCGACGCTGAGAATCTCACGGTGGAAAGAATCGATCAAGTGATCAACCAACTT 656
|||||||| ||||| |||||||| |||| || |||||| || ||||||||||||||||||
Sbjct 599 ATCCTGAGTGACGCAGAGAATCTAACGGAGGTAAGAATTGACCAAGTGATCAACCAACTT 658
Query 657 CTCAATGATCTGAAGGAAGATACGGTTAAGACAAAAGATTGGGCTAAAGTCATGTCTGCC 716
|||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||
Sbjct 659 CTCAATGATCTGAAAGAAGATACGGCTAAGACAAAATATTGGGCTAAAGTCATGTCGGCT 718
Query 717 TACGTTGTTTCGAAAGCCGGTTTGAATGGTTACACGAGGATCTTGGCAAAGAAACATCCC 776
|||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct 719 TACGTTGTTTCGAAAGCCGGTTTGAATGCTTACACGAGGATCTTAGCGAAGAAACATCCC 778
Query 777 GAGTTTCGTGTAAACTCGGTTTGTCCTGGATTTGTTAAGACGGATATGAATTTCAAAACT 836
||| |||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 779 GAGATTCGCGTTAACTCGGTTTGTCCTGGATTTGTTAAGACTGATATGAATTTTAAAACT 838
Query 837 GGAGTTTTGTCTGTGGAAGAAGGAGCATCAAGTCCTGTAAGGTTAGCTTTGCTTCCACAT 896
||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 839 GGAATTTTATCTGTGGAAGAAGGAGCATCAAGTCCTGTGAGGTTAGCTTTGCTTCCACAT 898
Query 897 CGAGAATCTCCTTCTGGTTGTTTCTTTGATCGTAAACAAGTTTCAGAGTTCTGAAATCTT 956
| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 899 CAAGAATCTCCTTCTGGTTGCTTCTTTGATCGCAAACAAGTTTCAGAGTTCTGAAATCTT 958
Query 957 TGTGTGGGGATAGTATAA 974
||||||| ||||| ||||
Sbjct 959 TGTGTGGAGATAG-ATAA 975
> AT3G61220.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:22662953-22664356 FORWARD LENGTH=1024
Length=1024
Score = 1092 bits (591), Expect = 0.0
Identities = 818/927 (88%), Gaps = 18/927 (2%)
Strand=Plus/Plus
Query 68 TGGGTTTTGTAGATATGCTATAGTTACTGGAGGGAATAGAGGAATTGGATTTGAGATATG 127
||| ||||||||||||||| |||||||||||| || ||||| |||||||||||||||||
Sbjct 102 TGGTTTTTGTAGATATGCTGTAGTTACTGGAGCAAACAGAGGGATTGGATTTGAGATATG 161
Query 128 CAGACAATTAGCAAACCAAGGGATTAGGGTTGTTCTGACATCTAGAGATGAAAGA-AGAG 186
|||||||||||| | |||||||||| |||||| |||| |||||||| |||| | ||||
Sbjct 162 CAGACAATTAGCTAGTGAAGGGATTAGAGTTGTTTTGACCTCTAGAGACGAAA-ACAGAG 220
Query 187 GACTTGAAGCTGTTGAGACATTGAAGAAAGAGCTTGGGATTTCTGATCAAAGCAC-TGTC 245
|||||||||||||||||||| ||||||||||||||| |||||||||||||||| | | |
Sbjct 221 GACTTGAAGCTGTTGAGACACTGAAGAAAGAGCTTGAGATTTCTGATCAAAGC-CTTCTT 279
Query 246 TTTCATCAGCTTGATGTCTCTGATCCAGCTAGTATCTCATCTCTTGCTGAGTTTGTGAAA 305
|||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct 280 TTTCATCAGCTTGATGTCGCTGATCCTGCTAGTATCACATCTCTTGCTGAGTTTGTGAAA 339
Query 306 ACCCAATTCGGAAAACTCGATATCTTGATTAATAATGCAGGGGTTGGTGGTGTAATCACT 365
|||||||| || ||||||||||||||| | |||||||||||| |||||||| ||||||||
Sbjct 340 ACCCAATTTGGGAAACTCGATATCTTGGTCAATAATGCAGGGATTGGTGGTATAATCACT 399
Query 366 GATGTTGATGCTTTAAGAGCTGGGACTGGGAAAGAAGGTTTCAAATGGGAGGAAA-CTAT 424
|||| ||| ||||||||||||||| | ||||||||||||||||| ||||| |||| | ||
Sbjct 400 GATGCTGAAGCTTTAAGAGCTGGGGCAGGGAAAGAAGGTTTCAAGTGGGATGAAATC-AT 458
Query 425 CACAGAGACGTATGAGCTAGCTGAAGAATGCATCAAGATTAACTGTTATGGACCAAAGAG 484
||| ||||| |||||| || ||||||||||||||||||| |||| ||||||||||||||
Sbjct 459 CACGGAGACTTATGAGTTAACTGAAGAATGCATCAAGATAAACTACTATGGACCAAAGAG 518
Query 485 AATGTGTGAGTCGTTTATTCCTCTTTTGCAGTTATCTGATTCTCCAAGAATCGTTAATGT 544
|||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 519 AATGTGTGAGGCGTTTATTCCTCTTTTGAAGTTATCTGATTCACCAAGAATCGTCAATGT 578
Query 545 ATCATCATTCATGGGTCAACTAAAGAATTTACTAAACGAATGGGCAAAAGGGATCCTGAG 604
|||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 579 ATCATCCTCCATGGGTCAACTAAAGAATGTACTAAACGAATGGGCAAAAGGAATCCTGAG 638
Query 605 CGACGCTGAGAATCTCACGGTGGAAAGAATCGATCAAGTGATCAACCAACTTCTCAATGA 664
|||||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||||
Sbjct 639 CGACGCAGAGAATCTCACTGAGGAAAGAATCGACCAAGTGATCAACCAACTTCTCAATGA 698
Query 665 TCTGAAGGAAGATACGGTTAAG-ACAAAAGATTGGGCTAAAGTCATGTCTGCCTACGTTG 723
| | || |||| ||| |||||| | |||| | ||||||||| | ||||| || || || |
Sbjct 699 TTTCAAAGAAGGTACAGTTAAGGAAAAAA-ACTGGGCTAAATTTATGTCGGCTTATGTGG 757
Query 724 TTTCGAAAGCCG-GTTTGAATGGTTACACGAGGATCTTGGCAAAGAAACATCCCGAGTTT 782
|||| |||| | |||||||||||||||||||| || |||| ||||||||||||||||||
Sbjct 758 TTTC-AAAGGCAAGTTTGAATGGTTACACGAGGGTCCTGGCGAAGAAACATCCCGAGTTT 816
Query 783 CGTGTAAACTCGGTTTGTCCTGGATTTGTTAAGACGGATATGAATTTCAAAACTGGAGTT 842
|| |||||| | || |||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 817 CGCGTAAACGCTGTGTGTCCTGGATTTGTTAAGACAGATATGAACTTCAAGACTGGAGTC 876
Query 843 TTGTCTGTGGAAGAAGGAGCATCAAGTCCTGTAAGGTTAGCTTTGCTTCCACATCGAGAA 902
|||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||| ||||
Sbjct 877 TTGTCTGTGGAAGAAGGAGCTTCAAGTCCTGTGAGGTTGGCTTTACTTCCGCATCAAGAA 936
Query 903 TCTCCTTCTGGTTGTTTCTTT-GATCGTAAACAAGTTTCAGAGTTCTGAAATCTT-TGT- 959
|||||||||||||||||||| | ||| || ||||||||||| ||||||| |||| | |
Sbjct 937 ACTCCTTCTGGTTGTTTCTTTAG-TCGCAAGCAAGTTTCAGAATTCTGAA-TCTTCTTTT 994
Query 960 GTGGGGATAGTATAATAAGCCAAAAAT 986
||| | | | ||||||||||||||||
Sbjct 995 GTGTG-AGA--ATAATAAGCCAAAAAT 1018
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49480634795
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5