BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481287
Length=1954
Score E
Sequences producing significant alignments: (Bits) Value
AT2G24300.2 | Symbols: | Calmodulin-binding protein | chr2:103... 3066 0.0
AT4G31000.1 | Symbols: | Calmodulin-binding protein | chr4:151... 1090 0.0
> AT2G24300.2 | Symbols: | Calmodulin-binding protein | chr2:10340908-10343736
FORWARD LENGTH=2084
Length=2084
Score = 3066 bits (1660), Expect = 0.0
Identities = 1860/1957 (95%), Gaps = 11/1957 (1%)
Strand=Plus/Plus
Query 1 GTTCCATGAACAAGCGAGGATACGAATGCAGTCAAGAGGATACAGACAAGTTGCCAGAAT 60
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1 GTTCCATGAACAAGCGAGGATACGAATGCAGTCAAGAGGATACTGACAAGCTGCCAGAAT 60
Query 61 CAAAGAGACAAAAAGTGCCTGCTTTGGCAAGTGTTATTGTGGAAGCTGTTAAGGTAGATA 120
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 61 CAAAGAGACAAAAAGTGCCTGCTTTAGCAAGTGTTATTGTGGAAGCTGTCAAAGTAGATA 120
Query 121 GTCTGCAGAGGCTTTGCTCGTCTTTGGAGCCGTTGTTTCACAGAATTGTTAGTGAAGAGG 180
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct 121 GTCTGCAGAGGCTTTGCTCGTCTTTGGAGCCGTTGTTTCGCAGAATTGTTAGCGAAGAAG 180
Query 181 TGGAACGAGCCTTATCAAGGTTGGGAAATGCAAAGTTAACATCGAGGTCACCAGAACCAA 240
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 181 TGGAACGAGCCTTATCAAGGTTGGGAAACGCAAAGTTAACCTCGAGGTCACCAGAACCAA 240
Query 241 AGAGGATCCAAGACCGCGATGGAAGAAACCTACAACTTCACTTTAGGACGCGAATGCCTC 300
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 241 AGAGGATCCAAGACCGCAATGGAAGAAACCTGCAACTTCACTTTAGGACGCGAATGCCTC 300
Query 301 CTCACTTATTCACAGGTGGGAAAGTCGAGGGAGAGCGAGGCTCGGCAATTCATGTGGTTC 360
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 301 CTCACTTATTCACAGGCGGGAAAGTTGAGGGAGAGCGAGGCTCGGCAATTCATGTGGTTC 360
Query 361 TTATAGATGCAAACACAGGAAATGTAGTCCAAACAGGAGAAGAGTCAGCTTCAAAGCTGA 420
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 361 TTATAGATGCAAACACAGGAAATGTAGTTCAAACAGGAGAAGAATCAGCTTCAAAGCTGA 420
Query 421 ATGTTGTAGTGTTAGAGGGTGACTTCAATGATGAAGACGATGAAGACTGGACGAGAGAGC 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 421 ATGTTGTAGTGTTAGAGGGTGACTTCAATGATGAAGACGATGAAGACTGGACCAGAGAGC 480
Query 481 ACTTTGAGAGCTTTGAAGTGAAAGAGCGAGAAGGGAAACGCCCCATTTTAACTGGGGACA 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 481 ACTTTGAGAGCTTTGAAGTGAAAGAGCGAGAAGGGAAACGCCCCATCTTAACTGGGGACA 540
Query 541 CACAGATAGTGCTTAAGGAAGGTGTGGGAACT-TTAGGAGAACTTACTTTCACTGACAAC 599
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 541 CACAGATAGTGCTTAAGGAAGGTGTGGGAACTCTT-GGAGAACTTACTTTCACTGACAAC 599
Query 600 TCGAGTTGGATACGGAGCCGAAAGTTTAGGCTTGGTGTTAAGCCGGCTGCAGGGTGTGGT 659
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 600 TCGAGTTGGATACGTAGCCGAAAGTTTAGGCTTGGTGTTAAGCCGGCTTCAGGGTATGGT 659
Query 660 GATAGCTTTTGCATTCGTGAAGCCAAAACAGAACCTTTTGCTGTCAAAGATCATAGAGGA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GATAGCTTTTGCATTCGTGAAGCCAAAACAGAACCTTTTGCTGTCAAAGATCATAGAGGA 719
Query 720 GAATTATACAAGAAACATTATCCACCGGCTGTACACGATGAAGTCTGGAGACTGGATAGA 779
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 720 GAACTATACAAGAAACATTATCCACCGGCTGTACACGATGAAGTCTGGAGACTGGATCGA 779
Query 780 ATAGCGAAAGACGGAGTGCTACACAAGAAACTATTGAAAGCTAATATCGTGACAGTCGAA 839
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 780 ATAGCGAAAGACGGAGTGCTACACAAGAAGCTATTGAAAGCTAATATTGTGACAGTCGAA 839
Query 840 GACTTCCTTCGACTCCTTGTTAAGGATCCACAGAAGCTGAGAAATTTGCTTGGGAGTGGA 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 GACTTCCTTCGACTCCTTGTTAAGGATCCACAGAAGCTGAGAAATTTGCTTGGGAGTGGA 899
Query 900 ATGTCGAATAGAATGTGGGAGAACACGGTGGAGCACGCAAAGACATGTGTGTTGGGTGGG 959
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 900 ATGTCGAATAGAATGTGGGAGAACACGGTGGAGCACGCAAAGACGTGCGTGTTGGGTGGG 959
Query 960 AAGCTTCATGTGTTTTACACAGACCAGACTCACGCTACAGGCGTTGTCTTCAACCATATC 1019
|||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 960 AAGCTTTATGTGTTTTACACAGACCAAACTCACGCTACAGGCGTTGTCTTCAATCATATA 1019
Query 1020 TATGAATTCCGAGGCCTAATTACAAACGGGCATTTCCTATCGCTAGAGTCTCTCAACCAT 1079
||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct 1020 TATGAATTCCGAGGCCTAATTACAAACGGACAGTTCCTATCTCTAGAGTCTCTTAACCAT 1079
Query 1080 GACCAAAAGATTTCTGCAGATATTTTGGTCAAGCTGGCTTACGAGAACTGGCATAAAGCT 1139
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1080 GACCAAAAGATTTCTGCAGACATTTTGGTGAAGCTGGCTTACGAGAACTGGCATAAAGCT 1139
Query 1140 ATTGAGTACGACGGTAAGCTGTTAAATTGCTTACCAGTTGCCGAGAAGGAAGTAAAAAGC 1199
|||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1140 ATTGAGTATGACGGTAAGCTGTTGAATTGCTTACCAGTTGCCGAGAAGGAAATAAAAAGC 1199
Query 1200 TTACCAGAACCAAAAATGGTCACAGCACAAACAACTCAGAACCATCAACAGCTGCACAAT 1259
|||| ||||||||||||||| |||||||||| ||| |||||||||||||||||| ||
Sbjct 1200 TTACTGGAACCAAAAATGGTCTCAGCACAAACTGCTCCGAACCATCAACAGCTGCATAAC 1259
Query 1260 CAGAATAATAGGCAAACTGTGCAATGTCATCAGAATGCTATTACCTATACACTGGTCCCT 1319
||||| |||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||
Sbjct 1260 CAGAACAATAGGCAAACTGTGCAAGGTCATCAGAATGCGATTACCTATTCACCGGTCCCT 1319
Query 1320 CAACCAATAGATTATCCTCAGTTTGAGCAGCAAAATTGCAGCCAATTATTACCCTCATTT 1379
||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||
Sbjct 1320 CAACCAATAGATTATCCTCAGTTTGCGCAGCAACATTGCAACCAATTATTACCCTCATTC 1379
Query 1380 CCTTGCAACGTACAAGACTACAACAGGTCGATGGAAAGTTCCAATGATTCAAGTTCATAC 1439
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1380 CCTTGCAACGTACAAGACTACAACAGGTCGATGGAAAGCTCCAATGATTCAAGCTCATAC 1439
Query 1440 AATGGAGAAGATTGGTGTCGC-CCAAGAGCTGCAGGACAAGGACTTGAAGACATTTTCAG 1498
||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||
Sbjct 1440 AATGGAGAAGATTGGTGTC-CACCAAGAGCTGCAGGACAAGGTCTTGAAGACATTTTCAG 1498
Query 1499 CGAAGAAATCAGACTAAGGAGCTCTGAAATGCTTGAGACTGATGATATGCAGAGACTGTT 1558
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1499 CGAAGAAATCAGACTAAGGAGTTCTGAAATGCTTGAGACTGACGATATGCAGAGACTGTT 1558
Query 1559 GAAGACTTTTGGCATTGGTGTGAACAATGTGGGAACAGAAGGTGGGTTTGGTCAGACTGA 1618
|||||| ||||| || |||||||||| |||||||||| |||| |||||||||||||||||
Sbjct 1559 GAAGACGTTTGGTATCGGTGTGAACACTGTGGGAACACAAGGAGGGTTTGGTCAGACTGA 1618
Query 1619 TGAGTCTTGTTACGGTTATAACATACCGTACCAAGCTCAGATCGATAACACGTTCAGGAC 1678
|||||||||||||||||||| ||| |||||||||||||||||||||||||||| | | |
Sbjct 1619 TGAGTCTTGTTACGGTTATAGCATCCCGTACCAAGCTCAGATCGATAACACGTACCGAAG 1678
Query 1679 AGAACGTAACAGAGGCTCGGGAAAAGCTGTGGTTGGATGGCTAAAGCTTAAAGCTGCTTT 1738
||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1679 AGAACGTAATAGAGGCTCGGGGAAAGCTGTTGTTGGATGGCTAAAGCTTAAAGCTGCTTT 1738
Query 1739 GAGATGGGGTATCTTCATACGCAAGAAAGCTGCAGAGAGGAGGCCTCAGATTGTGGAGAT 1798
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1739 GAGATGGGGTATCTTTATACGCAAGAAAGCTGCAGAGAGAAGGCCTCAGATTGTGGAGAT 1798
Query 1799 CGATTGACAAAAAATGGGATAGAGAGCCTT-TTGAGGTTTTAATCCTTTGACGAATTTTC 1857
||||||||||||| |||||||||||| || ||||||||||||||| |||| || |||||
Sbjct 1799 CGATTGACAAAAA--GGGATAGAGAGC-TTCTTGAGGTTTTAATCCGTTGAAGATTTTTC 1855
Query 1858 GTTTTCGTTAAAGCTTGAAGACAGTTTCTTTGTGTTCATCTTTTGGATGAACAATCTAAG 1917
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1856 GTTTTCGTTAAAGCTTGAAGACAGTTTCTGTGTGTTCATCTTTTGGATGAATAATCTAAG 1915
Query 1918 GGTAGAGAGAAGTGGACTTTGCTTTCTATTACATGTA 1954
|||||||| ||||||||||||| |||||||||||
Sbjct 1916 AGTAGAGAG---TGGACTTTGCTTTGTATTACATGTA 1949
> AT4G31000.1 | Symbols: | Calmodulin-binding protein | chr4:15103159-15105979
FORWARD LENGTH=2112
Length=2112
Score = 1090 bits (590), Expect = 0.0
Identities = 1032/1240 (83%), Gaps = 51/1240 (4%)
Strand=Plus/Plus
Query 2 TTCCATGAACAAGC-GAGGATACGAATGCAGTCAAGAGGATACAGACAAGTTGCCAGAAT 60
||| |||||||| | ||||| | | | || |||||| || ||||||| ||||||||||
Sbjct 252 TTCTATGAACAA-CAGAGGACATGGACACAATCAAGAACATGCAGACAACTTGCCAGAAT 310
Query 61 CAAAGAGACAAAAAG-TGCCTGCTTTGGCAAGTGTTATTGTGGAAGCTGTTAAGGTAGAT 119
||||||||| | ||| | ||||||||||||||||| || ||||||||||| |||||||||
Sbjct 311 CAAAGAGAC-AGAAGCTTCCTGCTTTGGCAAGTGTCATAGTGGAAGCTGTCAAGGTAGAT 369
Query 120 AGTCTGCAGAGGCTTTGCTCGTCTTTGGAGCCGTTGTTTC-ACAGAATTGTTAGTGAAGA 178
|||||||||||||| |||||||||||||| || || |||| | |||||||| ||||||||
Sbjct 370 AGTCTGCAGAGGCTATGCTCGTCTTTGGAACCATTATTTCGA-AGAATTGTCAGTGAAGA 428
Query 179 GGTGGAACGAGCCTTATCAAGGTTGG-GAAAT-GCAAAGT-TAACATCGAGGTC-ACCAG 234
||||||||| ||| |||||||||||| ||| | | ||| | || | || || || || ||
Sbjct 429 GGTGGAACGTGCCATATCAAGGTTGGAGAACTCG-AAA-TCTA-CTTCAAGATCTAC-AG 484
Query 235 AACCAAAGAGGATCCAAGACCGCGATGGAAGAAACCTACAACTTCACTTTAGGACGCGAA 294
|||| || | ||| |||| || |||||||||||| || ||||||| || || || ||||
Sbjct 485 AACCGAATAAGATTCAAGGCCTCGATGGAAGAAATCTGCAACTTCGGTTCAGAACACGAA 544
Query 295 TGCCTCCTCACTTATTCACAGGTGGGAAAGTCGAGGGAGAGCGAGGCTCGGCAATTCATG 354
|||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||| |
Sbjct 545 TGCCTCCTCATTTATTCACAGGTGGGAAAGTCGAGGGAGAGCAAGGCTCAGCCATTCACG 604
Query 355 TGGTTCTTATAGATGCAAACACAGGAAATGTAGTCCAAACAGGAGAAGAGTCAGCTT-CA 413
|||||||||||||||||||||| ||||||||| |||||||||||||||| ||| | ||
Sbjct 605 TGGTTCTTATAGATGCAAACACCGGAAATGTAATCCAAACAGGAGAAGAATCAA-TGACA 663
Query 414 AAGCTGAATGTTGTAGTGTTAGAGGGTGACTTCAATGATGAAGACGATGAAGACTGGACG 473
||||||||| |||| |||||||| || |||||||||||||||||||| |||| ||||||
Sbjct 664 AAGCTGAATATTGTCGTGTTAGATGGAGACTTCAATGATGAAGACGACAAAGATTGGACG 723
Query 474 AGAGAGCACTTTGAGAGCTTTGAAGTGAAAGAGCGAGAAGGGAAACGCCCCATTTTAACT 533
||||| || |||||||||||||||||||| || || ||||| ||||| ||||| || |||
Sbjct 724 AGAGAACATTTTGAGAGCTTTGAAGTGAAGGAACGCGAAGGAAAACGTCCCATCTTGACT 783
Query 534 GGGGACACACA-GAT-AGTGCTTAAGGAAGGTGTGGGAACT-TTAGGAGAACTTACTTTC 590
|| |||| ||| | | | | |||| |||||||| |||||| || ||| |||||||||||
Sbjct 784 GGTGACAGACATG-TGA-TAATTAAAGAAGGTGTAGGAACTCTT-GGAAAACTTACTTTC 840
Query 591 ACTGACAACTCGAGTTGGAT-ACGGAGCCGAAAGTTTAGGCTTGGTGTTAAGCCGGCTGC 649
|||||||| ||||| ||||| | ||||| |||||||||| |||||||||||||| |||
Sbjct 841 ACTGACAATTCGAGCTGGATTA-GGAGCAGAAAGTTTAGACTTGGTGTTAAGCC---TGC 896
Query 650 AGGGTGTGGTGATAGCTTTTGCATTCGTGAAGCCAAAACAGAACCTTTTGCTGTCAAAGA 709
| | | | || || ||| |||||||| ||||||||||| |||||||| |||||
Sbjct 897 AACG-G-G---AT---TTCA-CATCCGTGAAGCTAAAACAGAACCATTTGCTGTTAAAGA 947
Query 710 TCATAGAGGAGAATTATACAAGAAACATTATCCACCGGCTGTACACGATGAAGTCTGGAG 769
||| ||||||||| |||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct 948 TCACAGAGGAGAACTATACAAGAAACATTATCCACCGGTTTTACATGATGAAGTCTGGAG 1007
Query 770 ACTGGATAGAATAGCGAAAGACGGAGTGCTACACAAGAAACTATTGAAAGCTAATATCGT 829
| |||||| |||||||||||| |||| |||||||||||| ||| | ||| |||| || ||
Sbjct 1008 ATTGGATAAAATAGCGAAAGATGGAGCGCTACACAAGAAGCTACTAAAATCTAACATTGT 1067
Query 830 GACAGTCGAAGACTTCCTTC-GACTCCTTGTTAAGGATCCACAGAAGCTGAGAAATTTGC 888
||| || ||||||||||| | || | || | |||||||| ||||| || |||| || |
Sbjct 1068 GACTGTTGAAGACTTCCTACAGA-TACTCATGAAGGATCCGCAGAAACTAAGAAGCTTAC 1126
Query 889 TTGGGAGTGGAATGTCGAATAGAATGTGGGAGAACACGGTGGAGCACGCAAAGACATGTG 948
|||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 1127 TTGGGAGTGGAATGTCAAATAGAATGTGGGATAACACGGTAGAGCACGCAAAGACTTGTG 1186
Query 949 TGTTGGGTGGGAAGCTTCATGTGTTTTACACAGACCAGACTCACGCT-ACAGGC-GTTGT 1006
| || |||||||| ||| | | | ||||||||| || || ||| | |||| | |||||
Sbjct 1187 TCTTAGGTGGGAAACTTTACGCCTATTACACAGATCAAACACAC-CAGACAG-CTGTTGT 1244
Query 1007 CTTCAACCATATCTATGAATTCCGAGGCCTAATTACAAACGGGCATTTCCTATCGCTAG- 1065
||| || ||||| |||||||| | |||||||||| | || || || ||| | || | |
Sbjct 1245 CTTTAATCATATATATGAATTTCAAGGCCTAATTGCCAATGGCCACTTCTTGTCT-TCGG 1303
Query 1066 AGTCTCTCAACCATGACCAAAAGATTTCTGCAGATATTTTGGTCAAG-CTGGCTTACGAG 1124
| ||||| |||||||||||||||||||||||||| | |||||| ||| ||| ||||||||
Sbjct 1304 AATCTCTTAACCATGACCAAAAGATTTCTGCAGACACTTTGGTGAAGACTG-CTTACGAG 1362
Query 1125 AACTGGCATAAAGCTA-TTGAGTACGACGGTAAGCTGTTAAATTGCTTACCAGTTGCCGA 1183
||||||||||||| | ||||||| | ||||||||| || ||||||||||||||||| |
Sbjct 1363 AACTGGCATAAAG-TGGTTGAGTATGGCGGTAAGCTCTTGAATTGCTTACCAGTTGCTAA 1421
Query 1184 GAAGG-AAGTAAAAAGCTTACCAGAACCAAAAATGG-TCA 1221
||||| || |||||||||| ||||| |||||||||| |||
Sbjct 1422 GAAGGGAA-TAAAAAGCTTGCCAGAGCCAAAAATGGCTCA 1460
Score = 156 bits (84), Expect = 9e-37
Identities = 171/211 (81%), Gaps = 14/211 (7%)
Strand=Plus/Plus
Query 1598 AGGTGGGTTTGGTCAGACTGATGAGT-CTTGTTACGGTTATAACA-T-A-CCGTACCAAG 1653
||| ||||||||| | | ||||||| | | |||||||| | || | | | |||| |||
Sbjct 1725 AGGCGGGTTTGGTAACAGGGATGAGTCCAT-TTACGGTT-T--CAGTGATCAGTACGAAG 1780
Query 1654 CTCAGATCGATAACACGTT-CAGGACAGAACGTA-ACAGAGGCTC-GGGAAAAGCTGTGG 1710
||||||| || || ||| | || |||| | | |||||| | ||| |||||||| |
Sbjct 1781 CTCAGATAGACAA-GGGTTATATGAGAGAA-GGAGGTAGAGGCGCAGGG-AAAGCTGTAG 1837
Query 1711 TTGGATGGCTAAAGCTTAAAGCTGCTTTGAGATGGGGTATCTTCATACGCAAGAAAGCTG 1770
| |||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1838 TGGGATGGCTTAAGCTCAAAGCTGCATTGAGATGGGGTATCTTTATACGCAAGAAAGCTG 1897
Query 1771 CAGAGAGGAGGCCTCAGATTGTGGAGATCGA 1801
|||||||||||||||| ||||||||||||||
Sbjct 1898 CAGAGAGGAGGCCTCAAATTGTGGAGATCGA 1928
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96786650760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5