BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481325
Length=4830
Score E
Sequences producing significant alignments: (Bits) Value
AT2G24645.1 | Symbols: | Transcriptional factor B3 family prot... 1897 0.0
AT2G24650.1 | Symbols: | DNA binding;DNA binding;sequence-spec... 1074 0.0
AT4G00260.1 | Symbols: MEE45 | Transcriptional factor B3 family... 765 0.0
AT2G12170.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 191 6e-47
AT2G24660.1 | Symbols: | transposable element gene | chr2:1048... 130 1e-28
AT1G26680.1 | Symbols: | transcriptional factor B3 family prot... 56.5 2e-06
> AT2G24645.1 | Symbols: | Transcriptional factor B3 family protein
| chr2:10480532-10482795 REVERSE LENGTH=1814
Length=1814
Score = 1897 bits (1027), Expect = 0.0
Identities = 1295/1422 (91%), Gaps = 28/1422 (2%)
Strand=Plus/Plus
Query 3417 AATTCCTGTAGTCTTCTTCTTGAAGCATATAGAAGGAAGAGATGACCAAAAGACGGCAGA 3476
||| ||||||| ||||||||||||| |||||||||||||| |||| || |||||||| ||
Sbjct 202 AATACCTGTAGCCTTCTTCTTGAAGAATATAGAAGGAAGATATGAGCAGAAGACGGCGGA 261
Query 3477 GCTAAGATCCGACGCGTCGAAGATAACTTGGAAAGTGAAGATAGATGGACAGAGACTCAC 3536
||| ||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 262 GCTGAGATCAGATGCGTCAAAGATAACTTGGGAAGTGAAGATAGATGGACAGAGACTCAC 321
Query 3537 TGACGGTTGGAAAGAGTTTGCTTTAGCACATGATCTTCGAATCGGTGACATTGTCATTTT 3596
|||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||
Sbjct 322 TGACGGTTGGAAAGAGTTTGCTCTCTCACATGATCTTCGAATCGGTGACATTGTTGTTTT 381
Query 3597 CAGACAAGAGAGTGACT-TGTCTTTCCATGTGACACTATTAGGACCTAGTTGTTGTGAGA 3655
|||||||||||| || | |||||||||| || ||| | || |||||||||||||||||||
Sbjct 382 CAGACAAGAGAGAGA-TATGTCTTTCCACGTTACAATGTTGGGACCTAGTTGTTGTGAGA 440
Query 3656 TTCAATATGGTTCGTGTTTAGACGAAGAGACCAATCTCGAGAAGAAGAAGAATCCAAATG 3715
| |||||||||||||||| |||||| |||| || |||||||||||||||||||||||||
Sbjct 441 TCCAATATGGTTCGTGTTCAGACGAGGAGAGAAACCTCGAGAAGAAGAAGAATCCAAATG 500
Query 3716 GAGAAGCAGAGACTTCTTCACTAGATCGCT-CTTGTTTTGT-GGCTAAAGTCGCGCCTTC 3773
|||||||| || ||||||||||||||| || |||||||| | |||||| || ||||||||
Sbjct 501 GAGAAGCAAAGTCTTCTTCACTAGATC-CTTCTTGTTTT-TCGGCTAATGTGGCGCCTTC 558
Query 3774 GAGTCTAAGTTATGACTCAATGCATCTTCCAA-GGCCTTTTGTGAGAGAAAATGGTGTAG 3832
||||||| ||||||||| ||||| | |||||| || ||||||||| |||||||||||||
Sbjct 559 GAGTCTACGTTATGACTTAATGCTTTTTCCAATGGG-TTTTGTGAGGGAAAATGGTGTAG 617
Query 3833 TCACTGGATCTGGAGAGATTGTTCTGATGAATGAAAAGGGCAGATCATGGAAGTTAAAAT 3892
|| ||||||||| ||||||||||||||||||||||||||||||||||||| || || |
Sbjct 618 TC---GGATCTGGAAAGATTGTTCTGATGAATGAAAAGGGCAGATCATGGAATTTTAACT 674
Query 3893 TGAGACAAAAGCCATCATGCGGAACGGTTTATGTTAAAGGAGGGTGGGTGAGTTTTTGTG 3952
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 675 TGAGACAAAAGCCATCATGCGGAACAGTTTATGTTAGAGGAGGGTGGGTGAGTTTTTGTG 734
Query 3953 ATGCCAATGGACTT-AGAGCTGGAGATATCTACACTTTCAAACTGATCCAAAGAGGAGGA 4011
|||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 735 ATGCCAATGGACTTCA-AGCTGGAGATATCTACACTTTCAAACTGATCAAAAGAGGAGGA 793
Query 4012 ACTCTTGTTCTACGTTTGTTACCCAATGAAGAGGCAGAGTCTTCTTCACTAGATCCCTCT 4071
|||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||
Sbjct 794 ACTCTTGTTCTACGTTTGTTACCCAAAG--G-GGCAGAGTCTTGTTCACTAGATCCCTCT 850
Query 4072 TGTTTTGTGGCTAATGTCGCGCCTTCGTCTCTACGCTATGACACACTGTATCTTCCAAGG 4131
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 851 TGTTTTGTGGCTAATGTTGCGCCTTCGACTCTACGCTATGACACACTGTATCTTCCAAAG 910
Query 4132 CGTTTTATGAGGGAAAATGGTGTAGACAAAAGATGTGGAAAGATTATTTTGATGAACGAA 4191
||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||| |||
Sbjct 911 CGTTTTATGAGGGAAAATGGTGTAGACAAAAGACGTGGAGAGATGATTCTGATGAATGAA 970
Query 4192 AAGAGCAAATCATGGACTTTAGATTTAAAACGAAAGAAATCATGCGGAACTTCTTTAATC 4251
||| |||||||||||||||||||||| |||| ||||||||||||||||||||| | |||
Sbjct 971 AAGGGCAAATCATGGACTTTAGATTTGAAACTAAAGAAATCATGCGGAACTTCCCTCATC 1030
Query 4252 AAACGAGGATGGAGAAGTTTCTGTCA-TGCCAATGGACTTAGAGCTGGAAGTATCATAAA 4310
| |||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |
Sbjct 1031 AGACGAGGATGGAGAAGTTTCTGT-AGTGCCAATGGACTAAGAGCTGGAAGTATCATTAC 1089
Query 4311 ATTCAAACTGATaaa-aaaaGGAGGAAATCTTGTTCTACGTTTGCTCACCAACGAGCCAA 4369
||||||||||| || ||||| |||| |||||||||| |||||||| |||||||||||
Sbjct 1090 TTTCAAACTGATTAAGAAAAGT-GGAACTCTTGTTCTATGTTTGCTCTCCAACGAGCCA- 1147
Query 4370 AAGAAGAAGAAGAGTGCTCAGAAGCTAATGAAGTAGAGTCTCTTTCGACAGATCAAGAAA 4429
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 --GAAGAAGAAGTGTGCTCAGAAGCTAATGAAGTAGAGTCTCTTTCGACAGATCAAGAAA 1205
Query 4430 GCAATGAAGAGAG---CCACAACGAGAAAATCTCAAGAAGAAAGGAAAAGAAGGGTA-AC 4485
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1206 GCCATGAAGAGAGTAGCCACAACGAGAAAATCTCAAGAAGAAAGGAAAAGAAGGGTAGAA 1265
Query 4486 TTGATGTGGAAAGCTTCATCTTCACCATCCGAAAACCGATTTGTGACATTAACTCTTACA 4545
| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1266 T-GATATGGAAAGCTTCGTCTTCACCATCCGAAAACCGATTTGTGACATTAAATCTTACA 1324
Query 4546 CCTTACAACATCCTACGTTCTGTACTGCGCCTTCCGATACCCTTCACGAGGATGAATGGC 4605
||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 1325 CCTTATAACATCCTACGTTCTGCACTGCGTCTTCCGATACCCTTCACGAGGATGAATGGT 1384
Query 4606 ATCAACGAAGACACTAAAATGACTCTGTTGGATAAACATGGTATGAAGTGGTTAACCACT 4665
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1385 ATCAATGAAGAAACTAAAATGACTCTGTTGGATAAACATGGTATGAAGTGGTTAACGACT 1444
Query 4666 CTGCGGTTGGTGGACTACAAAAGTAAAAGATTAAGAATGGCAGGAGGCTGGCAAGGATTC 4725
||||||||||||||||||||||| |||||| | |||||| |||||||||| ||||||||
Sbjct 1445 CTGCGGTTGGTGGACTACAAAAGAAAAAGACTGGGAATGGTAGGAGGCTGGAAAGGATTC 1504
Query 4726 ATCCAAGCTAACTGTGTGAAGGCAAACGAATCCATCATGTTAGAGCTGATTTGGGAAGAA 4785
|||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1505 ATCCAAGCTAACGGTGTGAAGGCAAACGAATCCATCATGTTGGAACTGATTTGGGAAGAA 1564
Query 4786 GACACAAGTTGTATCCTGAAATTCTGCTCCAAGGTGAAGCTA 4827
|| |||||||| |||| || |||||||||||||||||||||
Sbjct 1565 GAAACAAGTTGCGTCCTTAAGTTCTGCTCCAAGGTGAAGCTA 1606
> AT2G24650.1 | Symbols: | DNA binding;DNA binding;sequence-specific
DNA binding transcription factors | chr2:10483490-10487571
REVERSE LENGTH=3138
Length=3138
Score = 1074 bits (581), Expect = 0.0
Identities = 790/885 (89%), Gaps = 38/885 (4%)
Strand=Plus/Plus
Query 303 TGAGGAGGTTCCCCGAGAGAAGAAAGCGAAGACGAACAGTGAAGAAGCAGAAGCAGTTTC 362
||| ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 384 TGAAGAGCTTCCCAAAGAGAAGAAAGCGAAGACGAACAGTGAAGAAGCAGATGCAGTTTC 443
Query 363 TTCTTCTTCATCAGCAGACAACTCATGTTTTGTGGCCCTTATCACAGCTTTGA-ATCTAA 421
||||||||||||||||||||| ||||||||| ||||| ||||||||||||| | ||||||
Sbjct 444 TTCTTCTTCATCAGCAGACAAGTCATGTTTTATGGCCATTATCACAGCTTT-AGATCTAA 502
Query 422 CGATAGATACACTGTATCTTCCACTACATTTCACAAGCTCAAATGGTCTTACAAGAAAAA 481
||| ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||
Sbjct 503 CGACAGATACACTGTATCTTCCACTACATTTTACAAGCGCAAATGGTCTTACACGAAAAA 562
Query 482 ACAGCGAGATTGTTTTAACAGATGGAGGGGAAAGATCATGGGTATTGGATCTGAGGTTCG 541
|| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 563 ACCGGGAGATTATTTTAACAGATGGAGGGGAAAGATCAAGGGTATTGGATCTGAGGTTCG 622
Query 542 ACGAATCATCTCATACTTTTTATATAAGCCGAGGTTGGAGAAATTTCTGTGATGAAAATG 601
||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 623 ACGAATCATCTGGTACTTTTTATATCAGCCGGGGTTGGAGAAATTTCTGTGATGAAAATG 682
Query 602 GACAAAAAGCAGGAGATTTCTTTATGTTTAAACTAGT-------GG-GAAACG--GG-GA 650
||||||||||||||| ||||||| ||||||||||||| || |||||| || |
Sbjct 683 GACAAAAAGCAGGAGGTTTCTTTCTGTTTAAACTAGTGGGAAAAGGTGAAACGCTGGTGC 742
Query 651 AAAG-CT-TGTGCT-CAG--T-T-TC---------CAGAACATTGCAAGGGAGGGCAGTA 694
|| | ||| || ||| | | || ||||||| ||||||||| |||||
Sbjct 743 TCAGTTTCTGTCCTACAGAATCTATCAATGGGGAAGAGAACATAACAAGGGAGGACAGTA 802
Query 695 AAGACGAGTGCAGCTCGTTGGACTCATTGATG--GATA-TAGAAAAAAGGAAGTATAGTG 751
|||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |
Sbjct 803 AAGACGAGTGCAGCTCGTTGGACTCATTGATGAATATAGTAGAAAAAAAGAAGTATATTC 862
Query 752 C-AAAGCGAAGAGGTTCACCATATTCATCATATTCGCCAAGTCATAAGCAATTCGTAACA 810
| ||| | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 863 CGAAA-CCAAGAGGTTCACCATATTCATCATATTCACCAAGTCATAAACAATTCGTAACA 921
Query 811 TTTACACTTCCACCTGATTATGCTAGAATTGGAAGATTGAGTCTTTCAGCGCCGTTCGTT 870
||||| |||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 922 TTTACGCTTCCACCGGATTATGCTAGAATTGGAAAATTGAGTCTTTCGGCGCCTTTCGTT 981
Query 871 AGGGAGAATGGCATCAACAAGCCTGGGGAGATATGTCTTTTGGATAAACATGGTAGAAAG 930
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 982 AGGGAAAATGGCATCAACAAGCCTGGGGAGATATGTCTTTTGGATAAACATGGTAGAAAG 1041
Query 931 TGGTTGACAAATCTTCTACTGGACAGTAAAGGGACAATGTCTTTGGGAAAGGGTTGGAAA 990
|||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1042 TGGTTGACAAGTCTTCTGCTGGACAGTAAAGGAACAATGTCTTTGGGAAAGGGTTGGAAA 1101
Query 991 GATTTTGTTAAAGCAAACAGCTTAGAGACGGGCTTCACGCTCAAGTTGAAATGGGAGGAA 1050
|| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct 1102 GAGTTTGTTAAAGCAAACAGCTTAGAGACGGGCTTCACACTCAAGTTGATATGGGAAGAA 1161
Query 1051 ACAACTCCTGTGCTTAGTTTGTGCTATGT--AGAATCTAACAGTGACAGAGAGCAAGAAG 1108
||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||
Sbjct 1162 ACAACTCCTGTGCTTAGTTTGTG-TA-GTCCAGAATCTAACAGTGACAGAGAGCAGGAAG 1219
Query 1109 AGTTTTCAAAAGCTATCGAGAAACGGTCTCTTTTCATGGATACTA 1153
|| ||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 1220 AGATTTCAAAAGCTATCGAGAAACATTCTCTTTTCATAGATCCTA 1264
Score = 1074 bits (581), Expect = 0.0
Identities = 794/891 (89%), Gaps = 37/891 (4%)
Strand=Plus/Plus
Query 1971 GCGTCTTTCAAAAATATTCACGAGGGAGAATGACATCAACAAGCCTGGGAGGATTACTCT 2030
|||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1467 GCGTCTCCCAAAGGTATTCACGAGGGAGAATGGCATCAACAAGCCGGGGAGGATTACTCT 1526
Query 2031 GTTGGGAAAAGACGGTATAAAGCAGCAAACGAATTTGTTATTTGACAAAACAAATGGAT- 2089
||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| |
Sbjct 1527 GTTGGGAAAAGACGGTATAAAGCAGCAGACGAATTTGTTATTCGACAAAGCAAATGG-TG 1585
Query 2090 CCATGTCTTTAGGA-AGCGGCTGGAAAGATTTTGTTAAAGACAATGGCTTAAAGACAGGT 2148
|||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1586 CCATGTCTTTGGGACA-CGGCTGGAAAGATTTTGTTAAAGATAATGGCTTAAAGACAGGT 1644
Query 2149 GACTCCTTCACGCTAAAGTTGATTTGGGAAGACCAAACTCCTGTGCTCAGCTTGTGTCCT 2208
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1645 GACTCCTTCACGCTAAAGTTGATTTGGGAAGACCAAACTCCTGTTCTTAGCTTGTGTCCT 1704
Query 2209 GCAGAATGTAGCATTGACAGAGAAGC---AGGA----G----G-AACAAACCAGAAAAAG 2256
||||| |||||||||||||||||||| |||| | | ||||||||||||||||
Sbjct 1705 GCAGACTGTAGCATTGACAGAGAAGCAGGAGGAGGGCGATCTGAAACAAACCAGAAAAAG 1764
Query 2257 TCTCTTCTC-ATAGAACCTAGCATC-TGTACAAAAGTCAGCAAAGAC--G----T----G 2304
||||||| | ||||||||||||| | |||| |||| |||| |||||| | | |
Sbjct 1765 TCTCTTC-CAATAGAACCTAGCA-CATGTAAAAAAATCAGGAAAGACGTGAACATCAAAG 1822
Query 2305 A--AC-A-A-CAAAGAGAAAAACAACAAAGAGGAGAGCACATCAGTGGATAGAGA-AAGA 2358
| || | | |||||||||||| ||||||| ||||||| |||||||||| |||| | ||
Sbjct 1823 ATGACAACAGCAAAGAGAAAAATGACAAAGAAGAGAGCAAATCAGTGGATGGAGAGAGGA 1882
Query 2359 AATCATCTGAGAGAGACAGATGTAACTCCATCAAGCCAAAAACACTTTGTGACATTAACA 2418
||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1883 AAT-ATCTGAGAGGGACATATTTAACTCCATCAAGCCAAAAACACTTTGTGACATTAACA 1941
Query 2419 GTTACACCTTCCTCTGTCAAAAAAGATAGACTTATTCTTTCAGCACAATTTGCAAGGGAG 2478
|||||||||||||| | ||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1942 ATTACACCTTCCTCTATAAAAAAAGATAGACTTATTCTTTCCCCACAATTTGCAAGGAAG 2001
Query 2479 AACAATATTAACAAGCCTGGAACGATATATCTGTTGGATAGAGATGGTACAAAGTGGCTG 2538
||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct 2002 AACAATATTGACAAGCCTGGAATGATATATCTGCTGGATACAGATGGTACAAAGTGGCTG 2061
Query 2539 ATAAACCTTCAACAAGATAAGAGAGGAACAATGAGTTTGGGAAAAGGTTGGAAAGAATTT 2598
|||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2062 ATAAGCCTTCAACGAGATAAGAAAGGAACAATGAGTTTGGGAAAAGGTTGGAAAGAATTT 2121
Query 2599 GCTGAAGCAAATGACATTAAGTTAGGTGAATCCTTTATGATGAAGTTAGTATGGGAAGGC 2658
||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||| |
Sbjct 2122 GCTGAAGCAAATGACTTTAAGTTAGGCGAATCCTTTACGATGGAGTTAGTATGGGAAGAC 2181
Query 2659 ACAACTCCTATGCTCAGTTTGTTACGTACAGAGTTTAGCAGTTCAAAAGCTAACAAGAAA 2718
||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||
Sbjct 2182 ACAACTCCTATGCTCAGTTTGTTACGTACCGAGTTTAGGAGTTCAAAAGCTAACGAGAAA 2241
Query 2719 GAGTCAATTTCTTCAGCACCTAAAAGCAGAGATTCATCCCCAATAATCAAAAACCGATTC 2778
||||||||||| |||| || ||||| |||||| |||||||||| ||||||||||||| ||
Sbjct 2242 GAGTCAATTTCCTCAGAACATAAAACCAGAGAATCATCCCCAACAATCAAAAACCGAATC 2301
Query 2779 GTGACACCAGCACTCACTCCTGAAGATTTTAAATCCTGTAAACTGATCCTT 2829
||||| ||||||||||| ||||||||| ||||| |||||||| |||| |||
Sbjct 2302 GTGACTCCAGCACTCACACCTGAAGATGTTAAAGCCTGTAAATTGATTCTT 2352
Score = 828 bits (448), Expect = 0.0
Identities = 547/595 (92%), Gaps = 5/595 (1%)
Strand=Plus/Plus
Query 2821 CTGATCCTTACAGCGCAATTTGCAAGGGAGAACAATATTAACAAGCCTGGAACTTTATAT 2880
||||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 2488 CTGATTCTTTCAGCGCAATTTGCAAGGGAGAACAATATTAACCAGCCTGGAACGATATAT 2547
Query 2881 CTGTCGGATACAGATGGTACAAAGTGGCTGACAACGGTTAAACGTGACAACAAAGGAACA 2940
|| | |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 2548 CTATTGGATACAGATGGTAGGAAGTGGCTGACAACGGTTAAACGGGACAAGAAAGGAACA 2607
Query 2941 ATGAGTTTGGGAAATGGTTGGAAAGAGTTTGCTGAAACAAATGACTTAAAGCT-AGGCGA 2999
|||||||||||||| |||||||||||||||||||| ||||| ||||||||| | ||||||
Sbjct 2608 ATGAGTTTGGGAAAGGGTTGGAAAGAGTTTGCTGATACAAAAGACTTAAAG-TCAGGCGA 2666
Query 3000 TTCCTTTACGATGGAGTTAATATGGGAAGACACAACTCCAATACTCAGTTTGTTACGTAC 3059
|||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||
Sbjct 2667 CTCCTTTACGATGGAGTTAATATGGGAAGACACAAATCCTGTGCTCAGTTTGTTACGTAC 2726
Query 3060 AAAGTTTAGCAGTTCAAAATCTAACAAGGAAGAGTCCATTTCCTCAGAACCTAAAAGTAG 3119
||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||
Sbjct 2727 AAAGTTTAGCAGTTCTAAATCTAACAAGGAAGAGTCCATTTTTTTAGAACCAAAAAGTAG 2786
Query 3120 AGATTCA---TCCCAAACAATCGAAAACCGATTCGTGACATTAGCACTTACACCTGAAGA 3176
||||||| |||| |||||||| |||| ||||||||||||||||||||||||| |||||
Sbjct 2787 AGATTCATCCTCCCCAACAATCGTAAACAGATTCGTGACATTAGCACTTACACCAGAAGA 2846
Query 3177 TGTCAAAGCCTGTAAACTGATTCTTCCAAGTCAATTCATGAAGGCTAATGGCATCAGTAA 3236
||| | ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 2847 TGTTACAGCCTGTAAACTGATTCTTCCAAGTCAGTTCATGAAGGCTAATGGCATCAACAA 2906
Query 3237 CAAACTTGGGAAGATAACGCTTTTGGGTGAAAACAGAGTCGAATGGCCGGGATATCTGTT 3296
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct 2907 CAAACTTGGGAAGATAACTCTTTTGGGTGAAAACGGAGTCGAATGGCCGGGATATATGTT 2966
Query 3297 GTCGAGCGATGGAACTGTTGCTTTGGGAAATGGTTGGGAAGGCTTTTGTGAGGCTAATGG 3356
|||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 2967 GTCGCTAGATGGAACTCTCGCTTTAGGAAATGGTTGGGAAGGCTTTTGTGAGGCTAATGG 3026
Query 3357 CGTGAAGTTAGGACAGTCTTTTACTTTGGAGTTTGTTAATGAACAAGATACAACA 3411
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3027 CGTGAAGTTAGGACAGACTTTTACTTTGGAGTTTGTTAATGAACAAGATACAACA 3081
Score = 429 bits (232), Expect = 1e-118
Identities = 275/296 (93%), Gaps = 2/296 (1%)
Strand=Plus/Plus
Query 11 TTTATCCGCAATTCTTCCACACACTTGTTCCTAGCTTCCTCACGCACTTCATGATTCCTG 70
||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct 17 TTTATCCGCAATTCTTCCACACACTTGTTCCTAGCTTCCACACTCACTTGATGATTCCTG 76
Query 71 AAGACTTCTTCTTAAAGTATATTGAAGGAAGAAGTGTCGCTGAGCTGAAATCGGACGTTT 130
|||||||||||| | ||||||| ||||||||||| ||||| |||||||||| |||| |||
Sbjct 77 AAGACTTCTTCTCAGAGTATATCGAAGGAAGAAGCGTCGCAGAGCTGAAATTGGACTTTT 136
Query 131 CGGACAGAA-CCTGGAAAGTGAAGTTGTCTGATCGGAGAATCACTGACGGCTGGGAAGAG 189
| |||| || | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137 CAGACA-AATCTTGGGAAGTGAAGTTGTCTGATCGGAGAATCACTGACGGCTGGGAAGAG 195
Query 190 TTTGTGGTAGCTAATGATTTTCGTATCGGCGATGTTGTCGTTTTTAGATATGTTGGAGAT 249
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 196 TTTGTGGTGGCTAATGATTTTCGTATCGGCGATGTTGTCGCTTTTAGATATGTTGGAAAT 255
Query 250 TTGGTGTTCCATGTTTCTAATTTAGGACCTAATTACTCTGAGATTCAAGACAATGA 305
||||||||||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct 256 TTGGTGTTCCATGTTTCTAATTTAGGACCTAATTACTATGAGATTGAACACAATGA 311
> AT4G00260.1 | Symbols: MEE45 | Transcriptional factor B3 family
protein | chr4:114971-117051 FORWARD LENGTH=1587
Length=1587
Score = 765 bits (414), Expect = 0.0
Identities = 571/644 (89%), Gaps = 22/644 (3%)
Strand=Plus/Plus
Query 3414 GACAATTCCTGTAGTCTTCTTCTTGAAGCATATAGAAGGAAGAGATGACCAAAAGACGGC 3473
|||||||||||||| ||||||||||||| |||||||||||||| |||| || ||||||||
Sbjct 54 GACAATTCCTGTAGCCTTCTTCTTGAAGTATATAGAAGGAAGATATGAGCAGAAGACGGC 113
Query 3474 AG-AGCTAAGATCCGACGCGTCGAAGATAACTTGGAAAGTGAAGATAGATGGACAGAGAC 3532
| |||| ||||| |||||||| |||| ||||||| |||||||||||||||| |||||||
Sbjct 114 -GAAGCTGAGATCAGACGCGTCAAAGAGAACTTGGGAAGTGAAGATAGATGGCCAGAGAC 172
Query 3533 TCACTGACGGTTGGAAAGAGTTTGCTTTAGCACATGATCTTCGAATCGGTGACATTGTCA 3592
|||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 173 TCACCGACGGTTGGAAAGAGTTTGCTGTCTCACATGATCTTCGAATCGGTGACATTGTTG 232
Query 3593 TTTTCAGACAAGAGAGTGACTTGTCTTTCCATGTGACACTATTAGGACCTAGTTGTTGTG 3652
||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||
Sbjct 233 TTTTCAGACAAGAGAGTGACTTGGCTTTCCATGTAACACTGTTGGGACCTAGTTGTTGTG 292
Query 3653 AGATTCAATATGGTTCGTGTTTAGACGAAGAGACCAA--TC--T--CGAG---AAG-AA- 3701
|||||||||||||||||||| || |||| ||| ||| || | |||| ||| ||
Sbjct 293 GGATTCAATATGGTTCGTGTTCAGTCGAAAAGAACAACCTCGGTGACGAGAAAAAGAAAG 352
Query 3702 -G-A--AGAATCCAAATGGAGAAGCAGAGACTTCTTCACTAGATCGCTCTTGTTTTGTGG 3757
| | ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||
Sbjct 353 TGAAGGAGAATCCAAATGGAGAAGCAGAGTCTTCTTCACGAGATCCCTCTTGTTTTGTGG 412
Query 3758 CTAAAGTCGCGCCTTCGAGTCTAAGTTATGACTCAATG-CATCTTCCAAGGCCTTTTGTG 3816
|||| || ||||||||||||||| ||||||||| ||| || |||||||| |||||||
Sbjct 413 CTAATGTTGCGCCTTCGAGTCTACGTTATGACTTGATGAGAT-TTCCAAGGGGTTTTGTG 471
Query 3817 AGAGAAAATGGTGTAGTCACTGGATCTGGAGAGATTGTTCTGATGAATGAAAAGGGCAGA 3876
|| || ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 472 AGGGATAATGGTGTAGT--C-GGATCTGGAGAGATTGTTCTGATGAATGAAAAGGGCAGA 528
Query 3877 TCATGGAAGTTAAAATTGAGACAAAAGCCATCATGCGGAACGGTTTATGTTAAAGGAGGG 3936
|||||||| || || |||||||||||||||||| |||||| |||||||||| |||||||
Sbjct 529 TCATGGAATTTTAACTTGAGACAAAAGCCATCAAACGGAACAGTTTATGTTAGAGGAGGG 588
Query 3937 TGGGTGAGTTTTTGTGATGCCAATGGACTTAGAGCTGGAGATATCTACACTTTCAAACTG 3996
|||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct 589 TGGGTGAGTTTTTGTGATGCCAATGGGCTTAAAGCTGGAGATAACTACACTTTCAAACTG 648
Query 3997 ATCCAAAGAGGAGGAACTCTTGTTCTACGTTTGTTACCCAATGA 4040
||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 649 ATCAAAAGAGCAGGAACTCTTGTTCTACGTTTGTTACCCAATGA 692
Score = 464 bits (251), Expect = 3e-129
Identities = 380/437 (87%), Gaps = 29/437 (7%)
Strand=Plus/Plus
Query 4041 AGAGGCAGAGTCTTCTTCACTAGATCCCTCTTGTTTTGTGGCTAATGTCGCGCCTTCGTC 4100
|||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct 804 AGAGGCAGAGTCTTCTTCACAAGATCCCTCTTGTTTTGTGGCTAATGTCTCCCCTTCGAG 863
Query 4101 TCTACGCTATGACACACTGTATCTTCCAAGGCGTTTTATGAGGGAAAATGGTGTAGACAA 4160
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 864 TCTACGCTATGACACACTGTATCTTCCAAAGCGTTTTATGAGGGAAAATGGTGTAGACAA 923
Query 4161 AAGATGTGGAAAGATTATTTTGATGAACGAAAAGAGCAAATCATGGACTTTAGATTTAAA 4220
|||||||||| |||| ||| |||| || |||||| | |||||||||||||||||||| ||
Sbjct 924 AAGATGTGGAGAGATGATTCTGATTAATGAAAAGGGAAAATCATGGACTTTAGATTTGAA 983
Query 4221 ACG-AAAGAAATCATGCGGAACTTCTTTAATCAAACGAGGATGGAGAAGTTTCTGTCA-T 4278
| | ||||||||||| |||||||||| | ||||||||||||||||||||||||||| | |
Sbjct 984 A-GTAAAGAAATCATCCGGAACTTCTCTCATCAAACGAGGATGGAGAAGTTTCTGT-AGT 1041
Query 4279 GCCAATGGACTTAGAGCTGGAAGTATCATAAAAT-TCAAACTGATaaa-aaaaGGAGGAA 4336
||||||||||| ||||||||||||||||||| | ||||||||||||| ||||| || ||
Sbjct 1042 GCCAATGGACTAAGAGCTGGAAGTATCATAAC-TCTCAAACTGATAAAGAAAAG-AGCAA 1099
Query 4337 ATCTTGTTCTACGTTTGCTCACCAACGAGCCAAAAGAAGAAGAAGAGTGCTCAGAAGCTA 4396
|||||||||||||||| || ||||||||||| ||||||| || | | |
Sbjct 1100 CTCTTGTTCTACGTTTGATCCCCAACGAGCCA---GAAGAAG-------CT-A-A---T- 1143
Query 4397 ATGAAGTAGAGTCTCTTTCGACAGATCAAGAAAGCAATGAAGAGAG---CCACAACGAGA 4453
||||||| |||||||||||||| ||||||||| |||||||||| |||| ||||||
Sbjct 1144 --GAAGTAGTCTCTCTTTCGACAGAGCAAGAAAGCGATGAAGAGAGTATCCACGACGAGA 1201
Query 4454 AAATCTCAAGAAGAAAG 4470
|||||||||||||||||
Sbjct 1202 AAATCTCAAGAAGAAAG 1218
Score = 329 bits (178), Expect = 1e-88
Identities = 231/257 (90%), Gaps = 2/257 (1%)
Strand=Plus/Plus
Query 4572 GCGCCTTCCGATACCCTTCACGAGGATGAATGGCATCAACGAAGACACTAAAATGACTCT 4631
||| |||||| | || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 1320 GCGTCTTCCGGTTCCTTTCACGAGGATGAATGGTATCAATGAAGAAACTAAAATGACTCT 1379
Query 4632 GTTGGATAAACATGGTATGAAGTGGTTAACCACTCTGCGGTTGGTGGACTACAAAAGTAA 4691
|||||||||||||||| ||||||||||||| ||||||||||| | |||| ||||||| ||
Sbjct 1380 GTTGGATAAACATGGTGTGAAGTGGTTAACGACTCTGCGGTTCGAGGACGACAAAAGAAA 1439
Query 4692 AAGATTAAGAATGGCAGGAGGCTGGCAAGGATTCATCCAAGCTAACTG-TGTGAAGGCAA 4750
|||| || |||||| |||||| |||||||||||||||||||||||| | |||||||||||
Sbjct 1440 AAGACTACGAATGGTAGGAGGATGGCAAGGATTCATCCAAGCTAAC-GATGTGAAGGCAA 1498
Query 4751 ACGAATCCATCATGTTAGAGCTGATTTGGGAAGAAGACACAAGTTGTATCCTGAAATTCT 4810
|||||||||||||||| || ||||||||||||||||| |||||||| |||| || ||||
Sbjct 1499 ACGAATCCATCATGTTGGAACTGATTTGGGAAGAAGAAACAAGTTGCGTCCTTAAGTTCT 1558
Query 4811 GCTCCAAGGTGAAGCTA 4827
|||||||||||||||||
Sbjct 1559 GCTCCAAGGTGAAGCTA 1575
Score = 78.7 bits (42), Expect = 5e-13
Identities = 61/70 (87%), Gaps = 2/70 (3%)
Strand=Plus/Plus
Query 4504 TCTTCACCATCCGAAAACCGATTTGTGACATTAACTCTTACACCTTACAACA-TCCTACG 4562
|||| || |||||||||||||||||||||||||||||| |||||||| | || ||| | |
Sbjct 1219 TCTTTACTATCCGAAAACCGATTTGTGACATTAACTCTAACACCTTATA-CAATCCAAAG 1277
Query 4563 TTCTGTACTG 4572
|||| |||||
Sbjct 1278 TTCTCTACTG 1287
> AT2G12170.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1);
Has 18 Blast hits to 18 proteins in 1 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:4890080-4891424
REVERSE LENGTH=707
Length=707
Score = 191 bits (103), Expect = 6e-47
Identities = 139/157 (89%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 3414 GACAATTCCTGTAGTCTTCTTCTTGAAGCATATAGAAGGAAGAGATGACCAAAAGACGGC 3473
|||||||| || || ||||||||||||| |||||||||||||||| || | ||||||||
Sbjct 470 GACAATTCATGCAGCCTTCTTCTTGAAGAATATAGAAGGAAGAGACGAGTAGAAGACGGC 529
Query 3474 AGAGCTAAGATCCGACGCGTCGAAGATAACTTGGAAAGTGAAGATAGATGGACAGAGACT 3533
||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 530 GGAGCTGAGATAGGACGTGTCGAAGATAACTTGGGAAGTGAAGATAGATGGACAGAGACT 589
Query 3534 CACTGACGGTTGGAAAGAGTTTGCTTTAGCACATGAT 3570
|||||||||||| |||||||||||| | ||||||||
Sbjct 590 CACTGACGGTTGTAAAGAGTTTGCTCTCTCACATGAT 626
> AT2G24660.1 | Symbols: | transposable element gene | chr2:10488140-10492243
REVERSE LENGTH=4104
Length=4104
Score = 130 bits (70), Expect = 1e-28
Identities = 80/85 (94%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 3196 ATTCTTCCAAGTCAATTCATGAAGGCTAATGGCATCAGTAACAAACTTGGGAAGATAACG 3255
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 244 ATTCTTCCAAGTCAATTCATGAAGGCTAATGGCATCAACAACAAACTTGGGAAGATAACT 303
Query 3256 CTTTTGGGTGAAAACAGAGTCGAAT 3280
|||||||||||||||||| | ||||
Sbjct 304 CTTTTGGGTGAAAACAGAATGGAAT 328
Score = 102 bits (55), Expect = 3e-20
Identities = 61/64 (95%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 3046 AGTTTGTTACGTACAAAGTTTAGCAGTTCAAAATCTAACAAGGAAGAGTCCATTTCCTCA 3105
||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 37 AGTGTGTTACGTACAAAGTTTAGCAGTTTAAACTCTAACAAGGAAGAGTCCATTTCCTCA 96
Query 3106 GAAC 3109
||||
Sbjct 97 GAAC 100
> AT1G26680.1 | Symbols: | transcriptional factor B3 family protein
| chr1:9219463-9223649 FORWARD LENGTH=3308
Length=3308
Score = 56.5 bits (30), Expect = 2e-06
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 4517 AAAACCGATTTGTGACATTAACTCTTACAC 4546
||||||||||||||||||||||||||||||
Sbjct 2758 AAAACCGATTTGTGACATTAACTCTTACAC 2787
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 240951827229
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5