BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481350 Length=510 Score E Sequences producing significant alignments: (Bits) Value AT2G24970.1 | Symbols: | unknown protein; Has 33 Blast hits to... 721 0.0 > AT2G24970.1 | Symbols: | unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:10620118-10621307 REVERSE LENGTH=613 Length=613 Score = 721 bits (390), Expect = 0.0 Identities = 460/494 (93%), Gaps = 3/494 (1%) Strand=Plus/Plus Query 19 AGATGAGTCATAATCATCATCATCAAGCTGTTGATAATCTGATAAATGTTTTCGCGAGAG 78 |||||| ||||||||||||||||||||||||||| |||||| ||||||||||| | |||| Sbjct 56 AGATGACTCATAATCATCATCATCAAGCTGTTGACAATCTGCTAAATGTTTTCTCAAGAG 115 Query 79 CTTCTCATGATCTTACTATTGTCCATTCCAAGCTCGACAAGGAGTTTCAGCAGCTTTATC 138 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||| Sbjct 116 CTTCTCATGATCTTACTGTTGTTCATTCCAAGCTCGACAAGGAGTTTCAGCAGATGTATC 175 Query 139 CTGATAATGCGAATCCGATGAAGCTGATTCAGAGAATCAAGAAGTTGCAGGAAGATGTGA 198 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 176 CTGCTAATGCGAATCCGATGAAGCTGATTCAGCGAATCAAGAAGTTGCAGGAAGATGTGA 235 Query 199 CTCTTCTTAAAGACCAATGTCTTGACCTATTGTCCGCTAAACAGGATTTGATTGATAAGG 258 ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 236 CTCTTCTTAAACACCAATGCCTTGACCTATTGTCTGCTAAACAGGATTTGATTGATAAGG 295 Query 259 CACAGACTACACTTGTTGGAAATTGCAACCTTATTCAGAAAATGAATGTATCTTTGGGAG 318 |||||||||||||||||||||| || |||||||||||||||||||||| ||| || |||| Sbjct 296 CACAGACTACACTTGTTGGAAACTGTAACCTTATTCAGAAAATGAATGCATCATTAGGAG 355 Query 319 AATCAACAAATGGTGAGGCCGATGATGCATTGGCTGATTTTAATCAGATCATCGACGAGT 378 ||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||| Sbjct 356 AATCAACGAATGGCGATACCGATGATGCATTGGCTGATTTTAATCAGATCATTGACGAGT 415 Query 379 GGACAATGCAAGTTAGATCCAGAACAGTGGGAGAGATAGAGGAGGCAGATAAAGAAGACA 438 |||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| Sbjct 416 GGACAATGCAAGTTAGATCCAGAACAGTGGGAGAAACAGAGGACGCAGATAAAGAAGACA 475 Query 439 TCAATAAGATGCTTTTCTCAGCTATT-GTTCATACCAATTGAGGATGTTCAT-GTTTATG 496 |||||||||||||||||||||||||| || |||||||||||| ||| ||||| ||| ||| Sbjct 476 TCAATAAGATGCTTTTCTCAGCTATTTGT-CATACCAATTGATGATATTCATTGTTCATG 534 Query 497 GTTATGTTCAGACC 510 |||||||| ||||| Sbjct 535 GTTATGTTAAGACC 548 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24363561295 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5