BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481377
Length=1185
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family... 1668 0.0
AT5G25170.1 | Symbols: | PPPDE putative thiol peptidase family... 265 9e-70
AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family... 235 7e-61
> AT2G25190.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr2:10733946-10735699 FORWARD LENGTH=1237
Length=1237
Score = 1668 bits (903), Expect = 0.0
Identities = 1048/1114 (94%), Gaps = 26/1114 (2%)
Strand=Plus/Plus
Query 1 AAGTGCTTAAAGAACACAACATAACACTTTTGCTTAAG-C-C-AATATTTGTCTTTAACC 57
||||||| ||||||||||||||||| |||||||||||| | | || | ||||| ||||||
Sbjct 14 AAGTGCTAAAAGAACACAACATAACTCTTTTGCTTAAGCCTCAAAAAATTGTCATTAACC 73
Query 58 CACTTTCCCAGAAACTTCAAAAACAGTTGGAGgaagaagaagaagaagaTGAAACGACGA 117
|| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 74 CAATTTCCCAGAAACTTCAAAAACAGTTGG-GG--GAAGAAGAAGAAGATGAAACGACGA 130
Query 118 AGAACCCTTTTAAAAAGTCTCAATCTT-TAAATCCAAGATCTGCCCTTTTTTCAGATTCT 176
|||||||||||| |||||||||||||| | |||||||||||||||| ||||||||| | |
Sbjct 131 AGAACCCTTTTATAAAGTCTCAATCTTCT-AATCCAAGATCTGCCC-TTTTTCAGA-T-T 186
Query 177 CTATCTC-AAGCTTACC-CGATCTTGTCATGTATTGAAGCC-G-GA-T-ATAGAGATGTT 230
||||||| |||||| || ||||||||| ||||||||||||| | || | | |||||||||
Sbjct 187 CTATCTCAAAGCTTTCCTCGATCTTGTGATGTATTGAAGCCGGAGACTGAGAGAGATGTT 246
Query 231 GTGCTTGAAAGGTTCGGTTAAGCGGAAGAAGCAATCCGGTTCTGTTCCGGTTTATCTGAA 290
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 GTGCTTCAAAGGCTCGGTTAAGCGGAAGAAGCAATCCGGTTCTGTTCCGGTTTATCTGAA 306
Query 291 TGTCTACGATCTAACTCCTATGAATGCTTATGGTTATTGGCTTGGACTTGGTGTTTTTCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 TGTCTACGATCTAACTCCTATGAATGCTTATGGTTATTGGCTTGGACTTGGTGTTTTTCA 366
Query 351 TTCTGGTGTTGAAGTTCATGGAGTTGAATATGCATTTGGAGCACATGAATCATCAAGCAC 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 TTCTGGTGTTGAAGTTCATGGAGTTGAATATGCATTTGGAGCACATGAATCATCAAGCAC 426
Query 411 AGGTATATTTGAAGTGGAGCCAAAGAAGTGTCCCGGTTTCACGTTTAGGAAATCGATTCT 470
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 427 AGGTATTTTTGAAGTGGAACCAAAGAAGTGTCCTGGTTTCACGTTTAGGAAATCGATTCT 486
Query 471 TGTGGGGAAAACCGACTTGGTTGCGAAAGAAGTTCGAGTCTTTATGGAGAAATTAGCTGA 530
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 487 TGTGGGGAAAACCGACTTGGTTGCGAAAGAAGTTCGTGTTTTTATGGAGAAATTAGCTGA 546
Query 531 AGAGTATCAAGGAAACAAGTACCATCTCATCACAAGAAACTGCAACCATTTTTGCAATGA 590
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 547 AGAGTATCAAGGAAACAAGTACCATCTCATCACAAGGAACTGCAACCATTTTTGCAATGA 606
Query 591 AGTTTGTCTTAAACTTACTCAGAAATCAATACCTAGATGGGTGAACCGACTTGCTCGCTT 650
|||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 607 AGTTTGTCTTAAACTTGCTCAGAAATCAATCCCTAGATGGGTGAATCGACTTGCTCGCTT 666
Query 651 AGGGGTTCTCTGCAATTGTGTGTTACCACCGCGTTTGAACGAGGCAAAAGTGAGGCGGGT 710
||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||
Sbjct 667 AGGGGTTCTCTGCAACTGTGTGTTACCACCTCGTTTGAACGAGGCAAAAGTGAGACGAGT 726
Query 711 AGGAAAAGGAGAGCTTACGGAGAGTGAGAAGAAGAAACTAAGAAACCGATCAAGATCAGG 770
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||
Sbjct 727 AGGAAAAGGAGAGCTTTCGGAAAGTGAGAAGAAGAAACTAAGAAACCGATCACGATCAGA 786
Query 771 TCCTTTACTGTCTTCTTCTTCGTCTTCATCGACACCTGATAATCATCGTTCACACATTCG 830
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 787 TCCTTTACTGTCTTCTTCTCCGTCTTCATCGACACCTGATAATCATCGTTCACACATTCG 846
Query 831 AGCAAAATCAACTGGTAA-CAATCcttcttcttcttcttcttcttcGACATCGGGTTCTA 889
||||||||||| |||||| || ||||||||||||||||||||| || ||||||||||
Sbjct 847 AGCAAAATCAAGTGGTAATCA-TCCTTCTTCTTCTTCTTCTTCGTCT---TCGGGTTCTA 902
Query 890 AGAAAAATCAAAGACCTAGAA-CTCAAGACCAGAAGTCGCCAAGCGTAAGCATCAAGACT 948
||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 903 AGAAAAATCGAAGACCTA-AAGCTCAAGACCAGAAGTCGCCAAGCGTAAGCATCAAGACT 961
Query 949 TGATTCTTATCATCATTATTTGAACATTTAATTATTGTTTATGAAAAGGACAAAAAGTAA 1008
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 TGATTGTTATCATCATTATTTGAACATTTAATTATTGTTTATGAAAAGGACAAAAAGTAA 1021
Query 1009 AAAGACAAGA-CAGAAGAACATGCCAAGTAAAGTATCAATCATACATGGG-CATGCTCGT 1066
|||||||||| |||| |||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct 1022 AAAGACAAGAACAGAGGAACATGCCAAGCAAAGTATCAATCATATATGGGGCATGCTCGT 1081
Query 1067 GCTTTGTTCTAAGGTTATTTAAAACCTTATTGGG 1100
||||||||||||||||||| |||||||| |||||
Sbjct 1082 GCTTTGTTCTAAGGTTATTGAAAACCTTTTTGGG 1115
Score = 122 bits (66), Expect = 5e-27
Identities = 85/94 (90%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 1092 CTTATTGGGAGAGTGAGAGGTTATGATTATGTACAAAAAGAATATGATTCATATATTTTT 1151
|||| | |||||| ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1145 CTTA-TAGGAGAGAGAGAGGTCATGAGTATGTACAAAAAGAATATGATTCATATATTTTT 1203
Query 1152 CTATGTTTTATCTCACATTTCAATTTCTTTATTT 1185
|||||||||||||| ||||| || ||||| ||||
Sbjct 1204 CTATGTTTTATCTCTCATTTAAACTTCTTCATTT 1237
> AT5G25170.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr5:8693137-8695095 FORWARD LENGTH=1434
Length=1434
Score = 265 bits (143), Expect = 9e-70
Identities = 403/522 (77%), Gaps = 44/522 (8%)
Strand=Plus/Plus
Query 253 CGGAAGAAGCAATCCGGTTCTGTTCCGGTTTATCTGAATGTCTACGATCTAACTCCTATG 312
||||| ||| || ||||||| |||||||||||||||||||| |||||||| || || ||
Sbjct 151 CGGAAAAAGAAACCCGGTTCGGTTCCGGTTTATCTGAATGTATACGATCTCACACCCATC 210
Query 313 AAT-GCTTATGGTTATTGGCTT-GGACTTGGTG-TTTTTCATTCTGGTGTTGAAGTTCAT 369
||| || || | ||| ||| || |||||||| | | | ||| ||||||||||||||||||
Sbjct 211 AATGGC-TACGCTTACTGG-TTAGGACTTGG-GATCTATCACTCTGGTGTTGAAGTTCAT 267
Query 370 GGAGTTGAATATGCATTTGGAGCACATGAATCAT-CAAGC-ACAGGTATATTTGAAGTGG 427
||||||||||||| |||||||| || || |||| | | | || || ||||| || ||||
Sbjct 268 GGAGTTGAATATGGTTTTGGAGCTCACGA-TCATTCGA-CTACCGGGATATTCGAGGTGG 325
Query 428 AGCCAAAG-AAGTGTCCCGGTTTCACGTTTAGGAAATCGATTCTTG-TGGGGAA-AACCG 484
| || ||| || ||||| |||||||| |||||||| || || ||| | || || ||| |
Sbjct 326 AACCGAAGCAA-TGTCCGGGTTTCACATTTAGGAAGTCTATA-TTGATTGG-AAGAACTG 382
Query 485 ACTTGGTTGC-GAAAGAAGTTCGAGTCTTTATGGAGAAA-TTAGCTGAAGAGTATCAA-G 541
| || | | | |||| | ||||| ||||||||||||||| || || ||||| ||| | |
Sbjct 383 ATTTAGATCCTGAAA-ACGTTCGTGTCTTTATGGAGAAACTT-GCGGAAGAATAT-AGTG 439
Query 542 GAAACAAGT-ACCATCTCATCAC-AAGAAACTGCAACCATTTTTGCAATGAAGTTTGTCT 599
|||||| || | ||| | || || ||||| ||||| || ||||||||||| |||||| |
Sbjct 440 GAAACA-GTTATCATTTGATTACTAAGAAT-TGCAATCACTTTTGCAATGATGTTTGTGT 497
Query 600 TAAACTTACTCAGAA-ATCAATACCTAGATGGGTGAACCGACTTGCTCGCTTAGGGGTTC 658
|||| |||| ||| ||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct 498 GCAACTGACTC-GAAGATCGATCCCTAGTTGGGTTAACCGTCTTGCTCGCTTTGGT-TTG 555
Query 659 TCT-GCAATTGTGTGT-TACCACCGC-GTTTGAACGAGGCAAAAGTGAGGCGGGT-AGGA 714
| | |||| ||||| | | || || ||| ||| ||| | || ||||||| ||| || |
Sbjct 556 TTTTGCAACTGTGT-TCTGCCGGCGGAGTT-GAATGAGACTAAGGTGAGGCAGGTGAG-A 612
Query 715 --AAAGGA-GAGC---TTACGGAGAGT-GAGAAGAAGAAACT 749
|||||| ||| || |||| ||| ||||||||||||||
Sbjct 613 TCAAAGGAAGAGAAGATTCCGGA-AGTAGAGAAGAAGAAACT 653
> AT1G80690.1 | Symbols: | PPPDE putative thiol peptidase family
protein | chr1:30329068-30330803 REVERSE LENGTH=1178
Length=1178
Score = 235 bits (127), Expect = 7e-61
Identities = 326/417 (78%), Gaps = 34/417 (8%)
Strand=Plus/Plus
Query 273 TGTTCCGGTTTATCTGAATGTCTACGATCTAACTCCTATGAATG-CTTATGGTTATTGGC 331
|||||||||||||||||||||||||||||| ||||| || |||| || ||| ||| ||||
Sbjct 321 TGTTCCGGTTTATCTGAATGTCTACGATCTTACTCCCATTAATGGCT-ATGCTTACTGGC 379
Query 332 TTGGACTTGGTGTTTTTCATTCTGGTGTTGAAGTTCATGG-AGTTGAATATGCATT-TGG 389
|||| ||||| |||| ||||||||||||||||||||||| | | || ||||| || |||
Sbjct 380 TTGGTCTTGGCGTTTACCATTCTGGTGTTGAAGTTCATGGTA-TAGAGTATGC-TTATGG 437
Query 390 AGCACATGAATCATC-AAGCACAGGTATATTTGAAGTGGAGCCAAAG-AAGTGTCCCGG- 446
||| ||||||| ||| |||||| || ||||| |||| |||||| ||| || ||| ||
Sbjct 438 AGCTCATGAAT-ATCCAAGCACTGGGATATTCGAAGGGGAGCCGAAGCAA-TGTGAAGGC 495
Query 447 TTTCACGTTTAGGAAATCGATTCTTG-TGGGGAAAACCGA-CTTGGTTGCGAAAGAAGTT 504
||| |||||||||||||||||| ||| | || ||||| || |||||| | |||||
Sbjct 496 TTT-ACGTTTAGGAAATCGATT-TTGATTGGTAAAACGGATCTTGGTC-CTTTGGAAGT- 551
Query 505 C-GAGTCTT-TATGGAGAAA-TTAGCTGA-AGAGTATCAA-GGAAACAAGTACCATCTCA 559
| ||| || ||||||| || || ||||| | | || ||| |||| ||| |||| |
Sbjct 552 CAGAG-CTACTATGGAGCAACTT-GCTGACA-ACTA-CAAAGGAAGTTCTTACAATCTTA 607
Query 560 TCAC-AAGAAACTGCAACCATTTTTGCAATGAAGTTTGTCTTAAACTTA-CTCAGAAATC 617
|||| ||||| |||||||||||| ||| ||||| |||| |||| ||| || ||| ||
Sbjct 608 TCACCAAGAA-CTGCAACCATTTCTGCGATGAAACTTGTATTAAG-TTAACTGGGAA-TC 664
Query 618 -AATACCTAGATGGGTGAACCGACTTGCTCGCTTAGGGGTTC-TCTGCAATTGTGTG 672
||| ||||| ||||| ||||| ||||| || | || ||| | ||||| ||||||
Sbjct 665 CAATTCCTAGTTGGGTTAACCGCCTTGCCCGAATCGGC-TTCATGTGCAACTGTGTG 720
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58182431655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5