BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481390
Length=2487
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:10781... 2929 0.0
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:10788... 2628 0.0
> AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:10781851-10788065
REVERSE LENGTH=5122
Length=5122
Score = 2929 bits (1586), Expect = 0.0
Identities = 2164/2429 (89%), Gaps = 96/2429 (4%)
Strand=Plus/Plus
Query 70 AGAGATAGAAGTGGAAGAGCCCAAGAGATCATGGCCGTGGATCGGCCAGGAGAGTACACA 129
|||||| |||| ||| | || ||||||||| | ||||| ||||| |||||||||||| |
Sbjct 151 AGAGATGGAAGCGGAGGTGCACAAGAGATCGTAGCCGTCGATCGTCCAGGAGAGTACTCG 210
Query 130 GCCAAATGTCGATGGACGGTCGAGAGCTTCCCATGTCGTCTCAAAGCTAAGGCACTGTGG 189
|| ||| |||||||||| ||||||||| || ||| ||||||||||||||||||||
Sbjct 211 GCGTTGTGTAGATGGACGGTTGAGAGCTTCACA---CGTGTCAAAGCTAAGGCACTGTGG 267
Query 190 AGCAAGTACTTCGATGTAGGAGGCTACGATTGTCGTCTCTTGGTTTACCCTAGAGGTGAC 249
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 268 AGCAAGTACTTCGATGTAGGAGGATACGATTGTCGTCTCTTGGTTTATCCTAGAGGTGAT 327
Query 250 TCACAAGCCCTTCGTGGCTACATCAGCATCTACCTTCAGATCATTGACCCTCGAGGAACC 309
|| || || |||| ||| |||||||||||||| ||||||||||| |||||| ||||||||
Sbjct 328 TCTCAGGCTCTTCCTGGTTACATCAGCATCTATCTTCAGATCATGGACCCTAGAGGAACC 387
Query 310 ACTTCATCTC-TATGGGACTGTTTCTCTAGCTACCGACTCTCTATCGTCAACCATGTCGA 368
||||| |||| | ||||| |||||| ||||||| || ||||||||||| || | ||||||
Sbjct 388 ACTTCGTCTCGT-TGGGATTGTTTCGCTAGCTATCGTCTCTCTATCGTTAATCTTGTCGA 446
Query 369 TGATTCATTCACAATCCATAAGGATTCTTGGCATAGATTCTCTAGTAAGAAGAAATCTCA 428
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447 TGATTCTTTAACAATCCATAAGGATTCTTGGCATAGATTCTCTAGTAAGAAGAAATCTCA 506
Query 429 TGGATGGTGTGATTTCACCTTAAACTCTAGCATTTTGGATCCTAAGATTGGTTTTTTGTT 488
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 507 TGGATGGTGTGATTTCACCTTGAACTCTAGCATTTTGGATCCTAAGATGGGTTTTTTGTT 566
Query 489 TAACAATGATTTC-TTGCTTATCACGGCTGATATCTTGATTCTTAATGAGTCCGTGAGCT 547
||||||||| ||| ||||||||||| ||||||||||||||||| || ||||| |||||||
Sbjct 567 TAACAATGA-TTCGTTGCTTATCACTGCTGATATCTTGATTCTAAACGAGTCTGTGAGCT 625
Query 548 TTAGTATTGGTAATAACAAT-----G--A-----GT-T-----AAATTCCATAGCTGGAC 589
||||| || |||||||||| | | || | |||||||||||||||||
Sbjct 626 TTAGTCGTGATAATAACAATGAGGGGCAATCTTTGTATAAGGAAAATTCCATAGCTGGAC 685
Query 590 CAATGCCTGATGTGTTGAGTGGGAAGTTCACTTGGAAGGTAAATAATTTTAGCTTGTTTA 649
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 686 CAATGCCGGATGTGTTGAGTGGGAAGTTCACTTGGAAGGTAAATAATTTTAGTTTGTTTA 745
Query 650 AGGATATGATAAAGACACAGAAGATAACAAGCCCTGTTTTTCCAGCTGGGGAGAGTTATT 709
|||||||||||||||| |||||||| | ||||||||||| |||||||||||| || |||
Sbjct 746 AGGATATGATAAAGACGCAGAAGATTATGAGCCCTGTTTTCCCAGCTGGGGAGTGTAATT 805
Query 710 TGAGGATCTGTGCT-TACCAGAGTGTGGTTAATGAGCAAGAGTACCTATCCATGTGTTTG 768
|||||||| ||| | ||||||||||| |||||| |||||| || |||| |||||||||
Sbjct 806 TGAGGATCAGTG-TGTACCAGAGTGTTGTTAATTCGCAAGAATATATATCAATGTGTTTG 864
Query 769 GACAGTAGTGATACCGAAAAGACTGTT--TTATCGGACAAGAGCAGTTGGTGTTTGTTTA 826
|| |||| || || || |||||| || || || || | |||| |||||||||||||||
Sbjct 865 GAGAGTAAAGAGACTGAGAAGACT-TTGGTT-TCAGATAGGAGCTGTTGGTGTTTGTTTA 922
Query 827 GCATGTCAGCTTTGAATCAGAAGCCTGGGTGCACTCACATGCATAGAGATTCGTATGGGA 886
| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct 923 GGATGTCAGCTTTGAATCAGAAGCCTGGTTGCACTCACATGCATAGGGATTCATATGGCA 982
Query 887 GGTTTGCTTCTGATAATAAGAGCGGGGACAATACAAGCGTGGGCTGGAATGATTACATGA 946
|||||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct 983 GGTTTGCTGCTGATAATAAGAGTGGGGACAATACGAGCTTGGGCTGGAATGATTACATGA 1042
Query 947 AAATGTCTGACTTTGTGAACCCGGAAGCAGGGTTTTTACTCGATGACACGGCTGTCTTTA 1006
|||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||
Sbjct 1043 AAATGTCTGAGTTTGTGAACCCGGAAGCTGGGTTTTTACTCGATGATATGGCTGTCTTTA 1102
Query 1007 GCACCTCATTTCATGTTATCAAAGAGTTCAGTAGCTTTACTAAGAATGGTGGGTTGATTG 1066
|||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 GCACTTCGTTTCATGTTATTAAAGAGTTCAGTAGCTTTACTAAGAATGGTGGGTTGATTG 1162
Query 1067 AGGGAAGGAAT---G--GGA-CTA-G-A---A-ATGGACACATGGGAAAATTCACTTGGA 1114
|||||||||| | ||| ||| | | | |||||||||||||||||||||||||||
Sbjct 1163 GGGGAAGGAATGGGGCTGGAGCTAGGAAGTCAGATGGACACATGGGAAAATTCACTTGGA 1222
Query 1115 GAATTGAAAATTTCACAAGGTTAGTGAATCTTCTGGAGAAAAGGAAGATAACCGATCTTT 1174
||||||||||||||||||||||| | ||||||| |||| ||||||||||| | |||||
Sbjct 1223 GAATTGAAAATTTCACAAGGTTAAAGGATCTTCTAAAGAAGAGGAAGATAACAGGTCTTT 1282
Query 1175 GCATCAAAAGTAAGAGGTTTCAAATTGGGAACCGGGATTGTCGACTTATTGTTTATCCCC 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1283 GCATCAAAAGTAAGAGGTTTCAAATTGGGAACCGGGATTGTCGACTTATTGTTTATCCCC 1342
Query 1235 GAGGGCAGTCCCAGCCACCATGCCTTCATCTTTCAGTATTTCTTGAAGTGACAGATTCAC 1294
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1343 GAGGGCAGTCCCAGCCACCATG-C--CATCTTTCAGTATTTCTTGAAGTGACAGATTCAC 1399
Query 1295 GAAGCTCTAGTAGTGATTGGAGCTGTTTTGTTAGCCACCAACTATCAGTTGTTAACCAAA 1354
||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct 1400 GAAGCTC-A--AGTGATTGGAGCTGTTTTGTTAGCCACCGACTATCAGTTGTGAACCAGA 1456
Query 1355 GATCAGAGGAGATGTCAGTGACAAAGGAATCTCAGAATCGCTACTCGAAAGCTGCAAAGG 1414
||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1457 GATTGGAGGAGAAGTCGGTGACAAAAGAATCTCAGAATCGCTACTCGAAAGCTGCAAAGG 1516
Query 1415 ATTGGGGTTGGCGTGAGTTTGTGACACTTACTAGTTTGTTTGATCAAGACTCTGGATTTC 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1517 ATTGGGGTTGGCGTGAGTTTGTGACACTTACTAGTTTGTTTGATCAAGACTCTGGCTTTC 1576
Query 1475 TTGTTCAAGACTCTGTTGTTTTCTCCGCGGAGGTTCTTATTTTGAAAGAAACATCT-CTA 1533
||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||
Sbjct 1577 TTGTTCAAGACACTGTTGTTTTCTCCGCTGAGGTTCTTATTTTGAAAGAGACATCTGCTA 1636
Query 1534 ACAAAAGACTACAG-GGAGGCAGAATCAGCTAATTCAGTTTCACAAATTGATAACACCGT 1592
||||||| || | ||||||||| ||| ||||||||||||| | | |||||||| |||
Sbjct 1637 -CAAAAGAGTAT-GTGGAGGCAGACTCAACTAATTCAGTTTCTCCGACTGATAACAGCGT 1694
Query 1593 GAAAA---GTTCATTTACTTGGAAAGTGGAGAATTTCTTGGCCTTCAAGGAAATCATGGA 1649
|||| |||||||||||||||||||||| |||||||| |||||||| || || |||||
Sbjct 1695 CAAAAAAAGTTCATTTACTTGGAAAGTGGAAAATTTCTTAGCCTTCAAAGAGATAATGGA 1754
Query 1650 AACACGAAAGATTTTTAGCAAATTCTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGT 1709
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1755 AACACGAAAGATTTTTAGCAAATTCTTTCAGGCTGGTGGATGTGAACTCCGGATTGGTGT 1814
Query 1710 ATACGAGTCCTTTGACACCATATGCATATATTTAGAGAGTGATCAATCTGCAGGTACAGA 1769
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1815 ATATGAGTCCTTTGACACCATATGCATATATTTAGAGAGTGATCAATCTGCGGGTACAGA 1874
Query 1770 TGTGGACAATAATTTCTGGGTTAAGTACAAGATGGGTATTCTCAACCAAAAGAATCCTGC 1829
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1875 TGTGGACAATAATTTCTGGGTTAAGTACAAGATGGGTATTCTGAACCAAAAGAATCCGGC 1934
Query 1830 CAAAAGTGTGTGGAAGGAGTCATCTATATGTACCAAGACATGGAATAATTCTGTTCTACA 1889
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1935 CAAAAGTGTGTGGAAGGAGTCATCTATATGTACCAAGACATGGAATAATTCCGTTCTACA 1994
Query 1890 GTTTATGAAGGTGTCTGACATGTTGGAGGCTGATGCTGGGTTTCTTGTGCGTGACACTGT 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1995 GTTTATGAAGGTGTCTGACATGTTGGAGGCTGATGCTGGGTTTCTTGTGCGTGACACAGT 2054
Query 1950 TGTTTTTGTATGTGAAATATTGGATTGTTGTCCTTGGTTTGAGTTTTCAGACCTAATAAT 2009
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2055 TGTGTTTGTGTGTGAAATATTGGATTGTTGTCCTTGGTTTGAGTTTTCAGACCTAG-A-- 2111
Query 2010 GGTACTGGCTTCAGATGATGACCAAGCTGATGCCTCAGCCACCAATCCTGATGAAATTAT 2069
|||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||
Sbjct 2112 GGTACTGGCTTCAGATGATGACCAAG---ATGCCTTAACCACTGATCCTGATGAAATTAT 2168
Query 2070 GGATTCTGAGGAAAG-G-G---A---G-G-A-A-GA------CACATTCCAAGATTTTCT 2111
|||||||||||||| | | | | | | | || |||||| | |||||||||
Sbjct 2169 TGATTCTGAGGAAAGTGAGGGCATAAGCGGAGATGAGGAAGACACATTTCGAGATTTTCT 2228
Query 2112 TGCGCGAGCTGGAATC-ACTCTCCCGCTTGGAGAGAATCCGTCACAACTACAAGTTACTC 2170
| | ||||||||| || | |||| || |||| |||||||| ||||||| |||||||||||
Sbjct 2229 TTCCCGAGCTGGATTCCA-TCTCACGTTTGGGGAGAATCCTTCACAACCACAAGTTACTC 2287
Query 2171 TCCAAGAGAAGCTTCTAATGGATGCGGGTGCAATTGCTGGTTTTCTTACTGGCTTGCGTG 2230
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2288 TCCGTGAGAAGCTTCTAATGGATGCGGGTGCAATTGCTGGGTTTCTTACTGGCTTGCGTG 2347
Query 2231 TTTATCTTGATGATCCTACTAAAGCAAAGCGTTTACTTCTCCCGACTAAAATATC----A 2286
| ||||||||||| || ||||||| ||||||||||||||| |||||||||||||| |
Sbjct 2348 TATATCTTGATGACCCAACTAAAGTAAAGCGTTTACTTCTTCCGACTAAAATATCTTGTA 2407
Query 2287 A-G-------CAAGTTAACAAAGAGTGATGAATCTTCAGCAAGCCTGATGAATTTGCTGA 2338
| | |||| ||| |||||||||||||||||| | ||||| |||||||||||||
Sbjct 2408 ATGATAGAAGCAAGCTAATAAAGAGTGATGAATCTTCCCCTAGCCTAATGAATTTGCTGA 2467
Query 2339 TGGGTGTTAAAGTTCTACAGCAAGCAATTATTGATTTACTTCTAGATATTATGGTTGAGT 2398
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2468 TGGGTGTTAAAGTTCTACAGCAAGCCATTATTGATTTACTTCTAGATATTATGGTTGAGT 2527
Query 2399 GTTGCCAACCTCC-GAAGGAAGGCTCTCA 2426
||||||||||| | || ||||||||||||
Sbjct 2528 GTTGCCAACCTTCAGA-GGAAGGCTCTCA 2555
> AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:10788946-10791331
REVERSE LENGTH=2082
Length=2082
Score = 2628 bits (1423), Expect = 0.0
Identities = 1891/2108 (90%), Gaps = 68/2108 (3%)
Strand=Plus/Plus
Query 7 TCTTCATCAGCCGTGGACAAATCTCATTCCTCCATTTCATCGGAGAAGCCTCTCTCCTCA 66
||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 13 TCTTCATCAGCCGCAGACCAATCTCACCCCTCCATTTCATCGGAGAAGCCTCTCTCCTCA 72
Query 67 TCTAGAGATAG-AAGTGGAAGAGCCCAAGAGATCATGGCCGTGGATCGGCCAGGAGAGTA 125
||||||||| | ||| ||| | || ||||||||| | ||||| ||||| |||||||||||
Sbjct 73 TCTAGAGAT-GAAAGCGGAGGTGCACAAGAGATCGTAGCCGTCGATCGTCCAGGAGAGTA 131
Query 126 CACAGCCAAATGTCGATGGACGGTCGAGAGCTTCCCATGTCGTCTCAAAGCTAAGGCACT 185
||| || ||| |||||||||| ||||||||| || ||| ||||||||||||||||
Sbjct 132 CACGGCGTTGTGTAGATGGACGGTTGAGAGCTTCACA---CGTGTCAAAGCTAAGGCACT 188
Query 186 GTGGAGCAAGTACTTCGATGTAGGAGGCTACGATTGTCGTCTCTTGGTTTACCCTAGAGG 245
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 189 GTGGAGCAAGTACTTCGATGTAGGAGGATACGATTGTCGTCTCTTGGTTTATCCTAGAGG 248
Query 246 TGACTCACAAGCCCTTCGTGGCTACATCAGCATCTACCTTCAGATCATTGACCCTCGAGG 305
||| || || || |||| ||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 249 TGATTCTCAGGCTCTTCCTGGCTCCATCAGCATCTACCTTCAGATCATTGACCCTCGTGG 308
Query 306 AACCACTTCATCTCTATGGGACTGTTTCTCTAGCTACCGACTCTCTATCGTCAACCATGT 365
||||| ||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||
Sbjct 309 AACCAGTTCATCTCTGTGGGACTGTTTCGCTAGCTACCAACTCTCTATCATCAACCATGT 368
Query 366 CGATGATTCAT-TCACAATCCATAAGGATTCTTGGCATAGATTCTCTAGTAAGAAGAAAT 424
||||||||| | ||||||||| |||| ||||||||||||||||||||| |||||||| ||
Sbjct 369 CGATGATTC-TCTCACAATCCGTAAGAATTCTTGGCATAGATTCTCTAATAAGAAGAGAT 427
Query 425 CTCATGGATGGTGTGATTTCACCTTAAACTCTAGCATTTTGGATCCTAAGATTGGTTTTT 484
||||||||||||| |||||||| ||||||||||| |||||||||||||||| || ||||
Sbjct 428 CTCATGGATGGTGCGATTTCACTTTAAACTCTAGTGTTTTGGATCCTAAGATGGGGTTTT 487
Query 485 TGTTTAACAATGATTTCTTGCTTATCACGGCTGATATCT-TGATTCTTAATGAGTCCGTG 543
||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||| |||
Sbjct 488 TGTTTAACAATGATTCCTTGCTTATCACGGCTGATAT-TATGATTCTCAATGAGTCTGTG 546
Query 544 AGCTTTAGTATTGGTAATAACAATGAGTTAAATTCCATAGCTGGACCAATGCCTGATGTG 603
||||||||||||| ||||||||||||| ||| ||| |||| ||||| ||||||||
Sbjct 547 AGCTTTAGTATTGATAATAACAATGAG------TCCGTAGTTGGATCAATGACTGATGTG 600
Query 604 TTGAGTGGGAA-GTTCACTTGGAAGG-TAAATAATTTTAGCTTGTTTAAGGATATGATAA 661
|||||| |||| |||||||||| || | || ||||||||| |||||||||| |||||||
Sbjct 601 TTGAGT-GGAACTTTCACTTGGACGGTTGAA-AATTTTAGCATGTTTAAGGAAATGATAA 658
Query 662 AGACACAGAAGATAACAAGCCCTGTTTTTC-CAGCTGGGGAGAGTTATTTGAGGATCT-G 719
|||||||||||||||| || |||| ||||| |||||||||| ||| ||||||||| | |
Sbjct 659 AGACACAGAAGATAACGAGTCCTG-TTTTCGTAGCTGGGGAGTGTTTTTTGAGGAT-TGG 716
Query 720 TGCTTACCAGAGTGTGGTTAATGAGCAAGAGTACCTATCCATGTGTTTGGACAGTAGTGA 779
|| |||||||||||||||||||| |||||||||| | ||||||||||||||||||| ||
Sbjct 717 TGTTTACCAGAGTGTGGTTAATGCGCAAGAGTACTTCTCCATGTGTTTGGACAGTACAGA 776
Query 780 TACCGAAAAGACTGTTTTATCGGACAAGAGCAGTTGGTGTTTGTTTAGCATGTCAGCTTT 839
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 777 TACCGAAAAGAGTGTTTTATCGGACAAGAGCAGTTGGTGTTTATTTAGCATGTCAGCTTT 836
Query 840 GAATCAGAAGCCTGGGTGCACTCACATGCATAGAGATTCGTATGGGAGGTTTGCTTCTGA 899
||||||||||| ||| |||||| ||||| ||| ||| || ||||||||||||||| ||||
Sbjct 837 GAATCAGAAGCATGGTTGCACTAACATGAATAAAGAGTCTTATGGGAGGTTTGCTGCTGA 896
Query 900 TAATAAGAGCGGGGACAATACAAGCGTGGGCTGGAATGATTACATGAAAATGTCTGACTT 959
||||||||| |||||||||||| | |||| ||||| ||||||||||| |||||||||||
Sbjct 897 TAATAAGAGTGGGGACAATACAGGATTGGGATGGAACGATTACATGAAGATGTCTGACTT 956
Query 960 TGTGAACCCGGAAGCAGGGTTTTTACTCGATGACACGGCTGTCTTTAGCACCTCATTTCA 1019
|||||||||||| || |||| |||||||||||||| |||||||||||||||||||||| |
Sbjct 957 TGTGAACCCGGACGCGGGGTATTTACTCGATGACAAGGCTGTCTTTAGCACCTCATTTGA 1016
Query 1020 TGTTATCAAAGAGTTCAGTAGCTTTACTAAGAATGGTGGGTTGATTGAGGGAAGGAATGG 1079
|||||||||||||||||||||||||||||||||||| | | || | || | |||
Sbjct 1017 TGTTATCAAAGAGTTCAGTAGCTTTACTAAGAATGG-G-----ACTG-G--AA--A-TGG 1064
Query 1080 GACTAGAAATGGACACATGGGAAAATTCACTTGGAGAATTGAAAATTTCACAAGGTTAGT 1139
| || || ||||||| |||| |||||||||||||||||||||||| |||||
Sbjct 1065 -A-TA--------CA--TGGGAAAGTTCAGTTGGAGAATTGAAAATTTCACAAGCTTAGT 1112
Query 1140 -GAATCTTCTGGAGAAAAGGAAGATAACCGATCTTTGCATCAAAAGTAAGAGGTTTCAAA 1198
|| |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1113 TGA-TCTTCTTGAGAAGAGGAAGATAACCGGTCTTTACATCAAAAGTAAGAGGTTTCAAA 1171
Query 1199 TTGGGAACCGGGATTGTCGACTTATTGTTTATCCCCGAGGGCAGTCCCAGCCACCATGCC 1258
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1172 TTGGGAACCGGGATTGTCGACTTATTGTTTATCCCCGAGGGCAGTCGCAGCCACCAAGCC 1231
Query 1259 TTCATCTTTC-AGTATTTCTTGAAGTGACAGATTCACGAAGCTCTAGTAGTGATTGGAGC 1317
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 ---ATCTTTCTA-TATTTCTTGAAGTGACAGATTCACGAAGCTCTAGTAGTGATTGGAGT 1287
Query 1318 TGTTTTGTTAGCCACCAACTATCAGTTGTTAACCAAAGATCAGAGGAGATGTCAGTGACA 1377
|||||||||||||||| |||||||||||| ||||| ||||||||||||| ||| ||||||
Sbjct 1288 TGTTTTGTTAGCCACCGACTATCAGTTGTGAACCAGAGATCAGAGGAGAAGTCGGTGACA 1347
Query 1378 AAGGAATCTCAGAATCGCTACTCGAAAGCTGCAAAGGATTGGGGTTGGCGTGAGTTTGTG 1437
||||||||||||||||| | ||||||||| | ||| ||||||||||||||||||||||||
Sbjct 1348 AAGGAATCTCAGAATCGATTCTCGAAAGCCGAAAAAGATTGGGGTTGGCGTGAGTTTGTG 1407
Query 1438 ACACTTACTAGTTTGTTTGATCAAGACTCTGGATTTCTTGTTCAAGACTCTGTTGTTTTC 1497
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1408 ACACTTACTAGTTTGTTTGATCAGGACTCTGGATTTCTTGTTCAAGACTCTGTTGTATTC 1467
Query 1498 TCCGCGGAGGTTCTTATTTTGAAAGAAACATCTCTAACAAAAGACTACAGGGAGGCAGAA 1557
|||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1468 TCCGTTGAGGTTCTTATGTTGAAAGAAACATCTCTAACAAAAGACTACACGGAGGCAGAA 1527
Query 1558 TCAGCTAATTCAGTTTCACAAATTGATAACACCGTGAAAAGTTCATTTACTTGGAAAGTG 1617
|| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1528 TCTGCTAGTTCAGTTTCACAAATTGATAAAACCGTGAAAAGTTCATTTACTTGGAAAGTG 1587
Query 1618 GAGAATTTCTTGGCCTTCAAGGAAATCATGGAAACACGAAAGATTTTTAGCAAATTCTTT 1677
|||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||
Sbjct 1588 GAGAATTTCTTGGCCTTCAAGGGAATAATGGAAAAACGAAAGATATTTAGCAAATTCTTT 1647
Query 1678 CAGGCTGGTGGATGTGAACTTCGGATTGGTGTATACGAGTCCTTTGACACCATATGCATA 1737
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1648 CAAGCTGGTGGATGTGAACTTCGGATTGGTGTATATGAGTCCTTTGACACCATATGCATA 1707
Query 1738 TATTTAGAGAGTGATCAATCTGCAGGTA-CAGATGTGGACAATAATTTCTGGGTTAAGTA 1796
||||||||||||| ||||||||| |||| | |||||||| |||||||| |||||||||||
Sbjct 1708 TATTTAGAGAGTGGTCAATCTGCGGGTAAC-GATGTGGATAATAATTTATGGGTTAAGTA 1766
Query 1797 CAAGATGGGTATTCTCAACCAAAAGAATCCTGCCAAAAGTGTGTGGAAGGAGTCATCTAT 1856
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1767 CAAGATGGGTATTCTGAACCAAAAGAATCCGGCCAAAAGTGTGTGGAAGGAGTCATCTCT 1826
Query 1857 ATGTACCAAGACATGGAATAATTCTGTTCTACAGTTTATGAAGGTGTCTGACATGTTGGA 1916
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||
Sbjct 1827 ATGTACCAAGACATGGAATAATTCTGTTCTACTGTTTATGAAGGTGTCTGATATGTTAGA 1886
Query 1917 GGCTGATGCTGGGTTTCTTGTGCGTGACACTGTTGTTTTTGTATGTGAAATATTGGATTG 1976
||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct 1887 GGCTGATGCTGGGTTTCTTGTGCGTGACACTCTTGTGTTTGTGTGTGAAATATTGGATTG 1946
Query 1977 TTGTCCTTGGTTTGAGTTTTCAGACCTAATAATGGTACT-GGCTTCAGATGATGACCAAG 2035
|||||||||||||||||||||||||||| | ||| || |||||||||||||| ||||
Sbjct 1947 TTGTCCTTGGTTTGAGTTTTCAGACCTAG-A--GGT-CTTGGCTTCAGATGATGTTCAAG 2002
Query 2036 CTGATGCCTC-AGCCACCAATCCTGATGAAATTAT-GGATTCTGAGGAAAGGGAGGAAGA 2093
|||||| | |||| |||||||||||| |||| || ||||||| |||| ||||||||
Sbjct 2003 ---ATGCCTTGA-CCACGAATCCTGATGAAGTTATTGG-TTCTGAGAAAAGTGAGGAAGA 2057
Query 2094 CACATTCC 2101
||||||||
Sbjct 2058 CACATTCC 2065
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123410679780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5