BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481398
Length=2733
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25470.1 | Symbols: AtRLP21, RLP21 | receptor like protein 2... 3024 0.0
AT5G49290.1 | Symbols: ATRLP56, RLP56 | receptor like protein 5... 837 0.0
AT1G54470.2 | Symbols: RPP27 | RNI-like superfamily protein | c... 599 5e-170
> AT2G25470.1 | Symbols: AtRLP21, RLP21 | receptor like protein
21 | chr2:10838420-10841881 FORWARD LENGTH=2808
Length=2808
Score = 3024 bits (1637), Expect = 0.0
Identities = 2000/2177 (92%), Gaps = 18/2177 (1%)
Strand=Plus/Plus
Query 566 TGCAAGAACTAAAAAATTTGATTAACTTGGAAGTCTTGGGTCTTGCTCAGAATCATGTGG 625
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 641 TGCAAGAACTACAGAATTTGATTAACTTGGAAGTCTTGGGTCTTGCTCAGAATCATGTAG 700
Query 626 ACGGACCTATACCAATAGAAGTATTCTGTAATA-TTAAGAATCTGCGAGAGCTCTATCTC 684
||||||||||||||||||||||||||||||| | | ||||||||||| || ||| |||||
Sbjct 701 ACGGACCTATACCAATAGAAGTATTCTGTAA-ACTGAAGAATCTGCGGGATCTCGATCTC 759
Query 685 AGAGGAAATCATTTTGTAGGCCAGCTTCCTCTTTGTTTAGGTCGCTTGAAGAAGCTACGG 744
| |||||||||||||||||| || | ||||||||||||||| |||||||||||||||||
Sbjct 760 AAAGGAAATCATTTTGTAGGTCAAATACCTCTTTGTTTAGGTAGCTTGAAGAAGCTACGG 819
Query 745 GTTCTTGATCTCTCATCCAACCAACTAAGTGGA-ATTCTACCATCTAGTTTCAATAGCCT 803
|||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||| ||
Sbjct 820 GTTCTTGATCTCTCATCCAACCAATTAAGTGGAGA-TCTACCATCTAGTTTCAGTAGTCT 878
Query 804 TGAGTCTCTCGAATACCTATCATTGCT-AGAGAACAATTTTGCTGACTCATTCTCGCTCA 862
||||||||||||||| ||||||||| | || |||||||| | || ||||||||| ||||
Sbjct 879 TGAGTCTCTCGAATATCTATCATTG-TCGGATAACAATTTCGATGGCTCATTCTCACTCA 937
Query 863 ATCCACTCACCAACCTTACAAAGCTCAAGTTTATTGTTGTACTAAGATTTTGCAGCTTGG 922
|||||||||||||||||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct 938 ATCCACTCACCAACCTTACAAACCTCAAGTTTGTTGTTGTACTACGGTTTTGCAGCTTGG 997
Query 923 TGGGAATCCCGTCCTTTCTCGTGTACCA-AAAGAAGTTGCGTCTAGTTGATCTTTCGAGC 981
| |||||| ||||||||| ||||||| ||| || ||||||||||||||||| || |||
Sbjct 998 AGAAAATCCCTTCCTTTCTCTTGTACCAGAAA-AAATTGCGTCTAGTTGATCTATCCAGC 1056
Query 982 AACAAATTATCTGGAAATATTCCTACCTGGCTGCTGACGAATAATCCAGGACTTGAAGTC 1041
||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1057 AACAATTTATCTGGAAATATTCCTACGTGGCTGCTGACGAATAATCCAGAACTTGAAGTC 1116
Query 1042 CTACAGTTGCAGAATAATTCATTTATCAACTTTTCAATGCCTACAATAGTGCATAATTTG 1101
|||||| |||||||||||||||||| || |||| |||| |||||||| ||||||||||||
Sbjct 1117 CTACAGCTGCAGAATAATTCATTTACCATCTTTCCAATTCCTACAATGGTGCATAATTTG 1176
Query 1102 CAGATCTTGGATTTCTCAGCAAATAATATCGGGAAGTTCCCTGATAAGATGGATCATGCG 1161
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1177 CAGATCTTTGATTTTTCAGCAAATAATATCGGGAAGTTCCCTGATAAGATGGACCATGCA 1236
Query 1162 CTACCGAATCTGGTACGTTTAAATGGCTCGAATAATGGGTTCCAAGGGTGTTTCCCAACG 1221
||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct 1237 CTACCGAATCTGGTACGTTTAAATGGCTCGAATAATGGGTTCCAAGGTTATTTTCCAACG 1296
Query 1222 TCTATTGGTGAGATGAAGAATATATCATTCTTGGATCTATCTAATAATAACTTCTCTGGG 1281
||||||||||| ||||||||||| ||||||||||| || ||| |||||||||||||||||
Sbjct 1297 TCTATTGGTGAAATGAAGAATATTTCATTCTTGGACCTGTCTTATAATAACTTCTCTGGG 1356
Query 1282 AAGTTACCTAGAAGCTTTGTCACAGGTTGTGTTTCACTAATGTTCCTGAAGCTCTCTCAC 1341
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1357 AAGTTACCTAGAAGCTTTGTCACAGGTTGTGTTTCAATAATGTTCCTGAAGCTCTCTCAC 1416
Query 1342 AACAAATTTAGCGGCCATTTTCTCCCAAGAGAAACAAACTTCACTTCACTTGAGGTGTTG 1401
|||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||
Sbjct 1417 AACAAATTTAGCGGCCGTTTTCTTCCAAGAGAAACAAACTTCCCTTCACTTGACGTGTTG 1476
Query 1402 AGAATGGATAACAACTTATTTACGGGGAAGATCGGAGGTGGTTTGCGTAACTCCACAATG 1461
||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| |||
Sbjct 1477 AGAATGGATAACAACTTGTTTACGGGGAACATCGGAGGTGGTTTGAGTAACTCCACTATG 1536
Query 1462 TTGCGGATTCTAGACATGTCCAACAATGGTCTCACTGGTGCTATTCCAAGATGGTTATTT 1521
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 1537 TTGCGGATTCTAGACATGTCCAACAATGGGCTCTCTGGTGCTATTCCAAGATGGTTATTT 1596
Query 1522 AAATTTTCTTATTTGGATTACGTATTGATATCCAACAATTTCTTAGAAGGTACGATACCA 1581
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1597 GAGTTTCCTTATTTGGATTACGTATTGATATCCAACAATTTCTTAGAAGGTACGATACCT 1656
Query 1582 CCTTCTTTGTTGGGAATGCCTTTTCTTTCGTTTTTGGATCTTTCTGGAAACCAATTTTCT 1641
||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct 1657 CCTTCTTTGTTGGGAATGCCTTTTCTTTCGTTTCTAGACCTTTCTGGAAACCAATTTTCT 1716
Query 1642 GGAGCCTTACCGTTACATGTTGATAGCGAGCTCGGGATATATATGTTCCTACAGAACAAC 1701
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1717 GGAGCCTTACCGTCACATGTTGATAGCGAGCTCGGGATATATATGTTCCTACACAACAAC 1776
Query 1702 AACTTCACAGGGCCAATCCCGGATACACTATTGAAAAGTGTTCAGATACTTGATCTGCGG 1761
||||||||||||||||| || || ||| | ||||||||||| ||||||||||||||||||
Sbjct 1777 AACTTCACAGGGCCAATTCCAGACACATTGTTGAAAAGTGTCCAGATACTTGATCTGCGG 1836
Query 1762 AACAATAAACTCTCTGGGAGTATCCCGCAGTTTGTTGATACAGAGAGCATAAATATTCTT 1821
|||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct 1837 AACAATAAACTCTCTGGGAGTATCCCGCAGTTTGACGATACACAGAGCATAAACATTCTT 1896
Query 1822 TTGTTG-AGTGGGAACAATTTAACAGGATCTATTCCAAGGGAGCTTTGTGATTTGAGAAA 1880
|||||| || || |||||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct 1897 TTGTTGAAG-GGAAACAATTTAACAGGGTCTATTCCACGGGAGCTTTGTGATTTGAGCAA 1955
Query 1881 CATTAGAC-TCTTAGATCTTTCGGACAACAAGCTCAATGGTGTCATACCTTCATGCCTGT 1939
| | |||| || |||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1956 CGTCAGACTTC-TAGATCTTTCAGACAACAAGCTCAATGGTGTCATACCTTCATGCCTCT 2014
Query 1940 CTAATTTGTCATTTGGACGCTTACAAGAAGACACAATGGCTCTCAACATTCCTCCCTCTT 1999
|||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| |
Sbjct 2015 CTAATTTGTCATTTGGACGCTTACAAGAGGACGCAATGGCTCTCAATATTCCGCCCTC-T 2073
Query 2000 TTCTT-CAAACAAGCCTTAAGTTGGAATTATACAAATCCACTTTTTTGGTAGATAAGATC 2058
||||| |||||||||||| || |||||||||||||||| ||||||||||||||||||||
Sbjct 2074 TTCTTGCAAACAAGCCTTGAGATGGAATTATACAAATCAACTTTTTTGGTAGATAAGATT 2133
Query 2059 GAAGTAGACCGCTCTACCTATCAAGAAACTGAGATCAAATTTGCAGCGAAGCAAAGGTAT 2118
||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct 2134 GAAGTGGACCGCTCTACTTATCAAGAAACTGAAATCAAATTTGCCGCAAAGCAAAGGTAT 2193
Query 2119 GATTCTTATAGTGGAAGATCTGAGTTCAGCGAAGGAATTCTTCGTCTTATGTACGGGATG 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2194 GATTCTTATAGTGGAAGATCTGAGTTCAGCGAAGGAATTCTTCGTCTTATGTATGGGATG 2253
Query 2179 GATCTGTCAAACAATGGATTAAGTGGTGTTATCCCAACAGAGCTTGGAGGTCTCTTGAAA 2238
||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 2254 GATTTGTCAAACAATGAATTAAGTGGTGTTATCCCGACAGAGCTTGGAGATCTCTTGAAA 2313
Query 2239 CTAAGAACCTTGAATCTGTCTCACAATTTCTTGTCGAGTTCTATACCATTTAGCTTCTCC 2298
||| ||||||||||||| |||||||||| ||||| | | |||||||||| |||||||||
Sbjct 2314 CTACGAACCTTGAATCTATCTCACAATTCCTTGTTGGGATCTATACCATCCAGCTTCTCC 2373
Query 2299 AAACTGAGGGATATTGAGAGCCTTGATCTTTCTCATAACATGTTGCAAGGAAGCATTCCT 2358
||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2374 AAACTGATAGATGTTGAGAGCCTTGATCTTTCTCATAACATGTTGCAGGGAAGCATTCCT 2433
Query 2359 CAACAACTTACCAGCCTTACTTCTCTTGCTGTGTTCGACGTGTCTTACAACAACTTATTA 2418
|| | ||| | ||||||||| ||||||||||||||||||||||||| |||||| |||| |
Sbjct 2434 CAGCTACTCAGCAGCCTTACCTCTCTTGCTGTGTTCGACGTGTCTTCCAACAATTTATCA 2493
Query 2419 GGAATCATTCCCCAAGGAAGGCAATTTGACACCTTTGAAGAGGACAGCTACTTAGGTAAT 2478
||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||
Sbjct 2494 GGAATCATTCCCCAAGGAAGGCAGTTTAACACCTTTGAAGAGGAGAGCTACTTAGGAAAT 2553
Query 2479 CCTCTGCTTTGTGGACCACCGACCAGTAGAAATTGTGAGACTAAGAAAAGTCCAGAGGAA 2538
||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct 2554 CCTCTGCTTTGTGGACCACCGACCAGTAGAAGTTGTGAGACTAATAAGAGTCCAGAGGAA 2613
Query 2539 GCAGATAATGGAGGAGAAGAAGAAGATGATGAAGCTGCTATCGACATGGTGGTGTTCTAT 2598
|||||||||||| |||||||||||| ||| |||||||||| || ||| |||| ||||||
Sbjct 2614 GCAGATAATGGACAAGAAGAAGAAGACGATAAAGCTGCTATTGATATGATGGTTTTCTAT 2673
Query 2599 TTTAGTACTGCATT-AACTTATGTGACCGCATTGATAGGTATTCTTGTACTTATGTGCTT 2657
||||||||||| || || ||||||||||||||||||||| |||||||||||||||||||
Sbjct 2674 TTTAGTACTGC-TTCAATTTATGTGACCGCATTGATAGGCGTTCTTGTACTTATGTGCTT 2732
Query 2658 TGATTGTTCTTGGCGTCGAGCATGGCTCCGCATTGTCGATGGTTCCATCGTCGCTG-TGA 2716
||||||| |||||||||||||||||||||||||||| |||| || ||||| | | | | |
Sbjct 2733 TGATTGTCCTTGGCGTCGAGCATGGCTCCGCATTGTGGATGCTTTCATCGCCTCAGCT-A 2791
Query 2717 AAAATATGTTGCCTTAG 2733
|| || |||||||||||
Sbjct 2792 AACATGTGTTGCCTTAG 2808
Score = 891 bits (482), Expect = 0.0
Identities = 544/574 (95%), Gaps = 4/574 (1%)
Strand=Plus/Plus
Query 1 ATGTTACTGTTGGGGCAGCTACATGGATGCA-AAGGCTGCATTAAGAAAGAAAGAGAAGC 59
|||||||||||||||||||||||||| |||| || |||||||| |||||||||| |||||
Sbjct 1 ATGTTACTGTTGGGGCAGCTACATGGTTGCACAA-GCTGCATTGAGAAAGAAAGGGAAGC 59
Query 60 TTTGTTGGAGCTTAAGAAATACTTGATGTCAAGGAGTCGAGAATCAGGGCTCGACTATGT 119
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TTTGTTAGAGCTCAAGAAATACTTGATGTCAAGGAGTCGAGAATCAGGGCTCGACTATGT 119
Query 120 TCTCCCTACTTGGACTAATGACACAAAGAGCAATTGCTGCCAGTGGGATGGCATTAAATG 179
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 120 TCTCCCTACTTGGACTAATGATACAAAGAGTGATTGCTGCCAGTGGGATGGCATTAAATG 179
Query 180 CAATCGTACAAGCAGGCGGGTTATCGGGCTTTCTGTTGGTGATATGTACTTTAAAGAGAG 239
||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 180 CAATCGTACAAGCGGGCGGGTTATCGAGCTTTCTGTTGGTGATATGTACTTCAAAGAGAG 239
Query 240 CTCTCCTTTAAATCTTTCTTTGCTCCATCCCTTTGAAGAAGTTCGAAGTCTGAACTTATC 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CTCTCCTTTAAATCTTTCTTTGCTCCATCCCTTTGAAGAAGTTCGAAGTCTGAACTTATC 299
Query 300 TACTGAAGGATACAACGAATTCAATGGCTTCTTTGATGACGTAGAAGGTTATAGAAGCTT 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 300 TACGGAAGGATACAACGAATTCAATGGCTTCTTTGATGACGTAGAAGGTTATAGAAGTTT 359
Query 360 AAGTAGATTAAGAAACTTGCAGATCATGGATCTCTCAACAAATTATTTCAACAACACCAT 419
|||| ||||| |||||||| ||||||||||||||||||| |||||||||||| ||| ||
Sbjct 360 AAGTGGATTACGAAACTTGAAGATCATGGATCTCTCAACGAATTATTTCAACTACAGCA- 418
Query 420 C-TTTCCTTTTCTTAATGCCGCTACCTCACTTACAACTATTTTTCTCACGTATAACGAAA 478
| ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct 419 CATTTCCTTTTCTTAATGCCGCTACATCACTTACAACTCTTATTCTCACGTATAACGAAA 478
Query 479 TGGATGGACCTTTTCCTATTAAAGGACTAAAAGACTTGACAAACTTGGAACTGCTGGATT 538
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 479 TGGATGGCCCTTTTCCTATCAAAGGACTAAAAGACTTGACAAACTTGGAACTGCTGGATT 538
Query 539 TGAGAGCAAACAAATTAAAAGGCTCCATGCAAGA 572
|||||||||||||| |||| ||||||||||||||
Sbjct 539 TGAGAGCAAACAAACTAAACGGCTCCATGCAAGA 572
> AT5G49290.1 | Symbols: ATRLP56, RLP56 | receptor like protein
56 | chr5:19980195-19983869 FORWARD LENGTH=2727
Length=2727
Score = 837 bits (453), Expect = 0.0
Identities = 971/1212 (80%), Gaps = 71/1212 (6%)
Strand=Plus/Plus
Query 1552 TCCAACAATTTCTTAGAAGGT-ACGATACCACC-TT-CTTTGTTGGGA-ATGCCTTTTCT 1607
||||||||||||||||||||| | | ||||||| || | || ||| | || | ||
Sbjct 1555 TCCAACAATTTCTTAGAAGGTGA-GCTACCACCTTTGC-TT-CTGGTATTTG-AATATC- 1609
Query 1608 TTCGTTTT-TGGATCTTTCTGGAAACCAATTTTCTGGAGCCTTACCGTTACATGTT-GAT 1665
|| |||| |||| || |||||||| | ||| |||||||||||||| | ||||||| | |
Sbjct 1610 TTAATTTTCTGGACCTCTCTGGAAATCTATTATCTGGAGCCTTACCATCACATGTTAGTT 1669
Query 1666 AGCGAGCTCGGGATATATATGTTCCTACAGAACAACAACTTCACAGGGCCAATCCCGGAT 1725
| || | || | | |||||||||| ||||||||||||||||||||||| |||||
Sbjct 1670 TG-GA--T---AATGT-TTTGTTCCTACACAACAACAACTTCACAGGGCCAATTCCGGAC 1722
Query 1726 ACACTATTGAAAAGTGTTCAGATACTTGATCTGCGGAACAATAAACTCTCTGGGAGTATC 1785
||| | ||| ||| | |||||||||||||| |||||||||||||||||||||| |||
Sbjct 1723 ACATTTTTGGGAAGCATCCAGATACTTGATCTACGGAACAATAAACTCTCTGGGAATATA 1782
Query 1786 CCGCAGTTTGTTGATA--CAGAGAGCATAAATATTCTTTTGTTGAGTGGGAACAATTTAA 1843
||||||||||| |||| || ||| ||| | | ||||||||||||| ||||||| |||||
Sbjct 1783 CCGCAGTTTGTAGATACCCA-AGA-CATCAGTTTTCTTTTGTTGAGGGGGAACAGTTTAA 1840
Query 1844 CAGGATCTATTCCAAGGGA-GCTTTGTGATTTGAGAAACATTAGACTCTTAGATCTTTCG 1902
| |||| |||||||| | | ||||||||| || || || || ||||| |||||||||||
Sbjct 1841 CGGGATATATTCCAA-GTACGCTTTGTGAATTCAGCAAGATGAGACTTTTAGATCTTTCT 1899
Query 1903 GACAACAAGCTCAATGG-TGTCATACCTTCATGCCTGTC--TAATTTGTCATTTGGACGC 1959
|| |||||||||||||| | ||||||||||||| | || |||||| ||||||||| |
Sbjct 1900 GATAACAAGCTCAATGGCT-TCATACCTTCATG--TTTCAATAATTTATCATTTGGA--C 1954
Query 1960 TTACAAGAAGACACAATGGCTCTCAACATTCCTCCCTCT-TTTC--TT-CA-AACA-AGC 2013
| | |||| | | | || | || | || || | || | || || | |||
Sbjct 1955 TGGCGAGAA-A-A-GA-GGAGAT-TAC-TAACT-ACTATGTTGCAGTTGCATTGGAGAGC 2007
Query 2014 CTTAAGTTGGAATTATACAAATCCACTTTTTTGGTAGATAAGATCGAAG-TAGACCGCTC 2072
|| | |||| ||| ||||||||||| ||| |||| || || || | | ||||| |
Sbjct 2008 TTTTACTTGGGATTCTACAAATCCACATTTGTGGTTGAGAATTTC-AGGTTAGACTACAG 2066
Query 2073 TACCTATCAAGAAACTGA-GATCAAATTTGCAGCGAAGCAAAGGTATGATTCTTATAGT- 2130
|| |||| |||| ||| | | ||||| ||| | |||||||||||||||||||||| |
Sbjct 2067 TAACTATTTTGAAATTGATG-TAAAATTCGCAACCAAGCAAAGGTATGATTCTTATA-TA 2124
Query 2131 GGAAG-ATCTGAGTTCAGCGAAGGAATTCTT-CGTCTTATGTACGGGATGGATCTGTCAA 2188
|| || || | ||||||||||||||| ||| || |||||| || ||||||||||||
Sbjct 2125 GG-AGCATTTCAGTTCAGCGAAGGAACACTTAATTC-TATGTATGGCTTGGATCTGTCAA 2182
Query 2189 ACAATGGATTAAGTGGTGTTATCCCAACAGAGCTTGGAGGTCTCTTGAAACTAAGAACCT 2248
||||| ||||||||||||||||||| |||||||||||| |||||| ||||||||| ||
Sbjct 2183 GCAATGAATTAAGTGGTGTTATCCCAGCAGAGCTTGGAGATCTCTTCAAACTAAGAGCCC 2242
Query 2249 TGAATCTGTCTCACAATTTCTTGTCGAGTTC-TATACCATTTAGCTTCTCCAAACTG-AG 2306
||||| |||||||||||||||||||||| || |||||| ||||||||| ||| || |
Sbjct 2243 TGAATTTGTCTCACAATTTCTTGTCGAG-TCATATACCGGATAGCTTCTCTAAATTGCA- 2300
Query 2307 GGATATTGAGAGCCTTGATCTTTCTCATAACATGTTGCAAGGAAGCATTCCTCAACAACT 2366
||| ||||||||||||||||||||| |||||||||| |||||||||||||||| || | |
Sbjct 2301 GGACATTGAGAGCCTTGATCTTTCTTATAACATGTTACAAGGAAGCATTCCTC-ACCAGT 2359
Query 2367 T-ACCAGCCTTACTTCTCTTGCTGTGTTCGACGTGTCTTACAACAACTTATTAGGAATCA 2425
| |||| ||| |||||||||||| | ||| |||| ||||||||||| |||| ||| ||||
Sbjct 2360 TAACCAACCTCACTTCTCTTGCTATCTTCAACGTCTCTTACAACAATTTATCAGGCATCA 2419
Query 2426 TTCCCCAAGGAAGGCAATTTGACACCTTTGAAGAGGACAGCTACTTAGGTAATCCTCTGC 2485
|||||||||||| ||||||| ||||||| || ||| ||||||||||||| |||||||| |
Sbjct 2420 TTCCCCAAGGAAAGCAATTTAACACCTTCGACGAGAACAGCTACTTAGGAAATCCTCTTC 2479
Query 2486 TTTGTGGACCACCGACCAG-TAGAAATTGTGAGACTAAGAA-AAGTCCAGAGGAAGCA-G 2542
| |||||||| || ||| | || || ||||| |||||||| || | |||||||| | |
Sbjct 2480 TCTGTGGACCGCCAACC-GATACAAGCTGTGAAACTAAGAAGAACT-CAGAGGAA-AATG 2536
Query 2543 ATAATGGAGGAGAAGAAGAAGATGATGAAGCTGCTATCGACATGGTGGTGTTCTATTTTA 2602
||||||||||||||||| || | |||| |||||| |||||| |||| ||||||| |
Sbjct 2537 CCAATGGAGGAGAAGAAGATGACAAAGAAGTTGCTATTGACATGTTGGTCTTCTATTGGA 2596
Query 2603 GTACTGCAT-TAACTTATGTGACCGCATTGATAGGTATTCTTGTACTTATGTGCT-TTGA 2660
||||||| | |||||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct 2597 GTACTGC-TGGAACTTATGTGACTGCATTGATAGGTATTCTTGTACTTATGTG-TGTTGA 2654
Query 2661 TTGTTCTTGGCGTCGAGCATGGCTCCGCATTGTCGATGGTTCCATCGTCGCTGTGAAAAA 2720
|||||||||||||||||||||||||||| ||||||||| || ||| | | ||| |||||
Sbjct 2655 TTGTTCTTGGCGTCGAGCATGGCTCCGCCTTGTCGATGCTTTCATTGCCTCTGCGAAAAG 2714
Query 2721 TATGTTGCCTTA 2732
|| |||| ||||
Sbjct 2715 TAAGTTGGCTTA 2726
Score = 523 bits (283), Expect = 3e-147
Identities = 727/929 (78%), Gaps = 79/929 (9%)
Strand=Plus/Plus
Query 1 ATGTTACTGTTGGGGCAGCTACATGGATGCA-AAGGCTGCATTAAGAAAGAAA-GAGAAG 58
|||||||||||||| || |||||||| | || | |||| ||| ||||||||| || |||
Sbjct 1 ATGTTACTGTTGGGACATCTACATGGTTTCAGCA-GCTGTATTGAGAAAGAAAGGA-AAG 58
Query 59 CTTTGTTGGAGCTTAAGAAATACTTGATGTCAAGGAGTCG-AGAAT-CAG-GGCTCGACT 115
||||||||||||| ||||||| | | ||||||||| | || ||||| | | | | ||||
Sbjct 59 CTTTGTTGGAGCTCAAGAAATTCGTCATGTCAAGGTG-CGAAGAATGC-GAGTAT-GACT 115
Query 116 ATGTTCTCCCTACTTGGACTAATGACACAAAGAGCAATTGCTGCCAGTGGGATGGC-ATT 174
|||||||||||||||||||||||||||||||||| ||||||| |||||||| | |||
Sbjct 116 CTGTTCTCCCTACTTGGACTAATGACACAAAGAGCGATTGCTGTCAGTGGGA-GAATATT 174
Query 175 AAATGCAATCGTACAAGCAGGCGGGTTATCGGG-CTTTCTGTTGGTGATAT-GTACT--T 230
|| |||||||||||||||||||| ||| |||| ||||| || | || ||||| |
Sbjct 175 AAGTGCAATCGTACAAGCAGGCGTCTTA-CGGGACTTTCCCTTTAC-ACATCGTACTACT 232
Query 231 TAAAGAGAGCTCTCCTT-TAAATCTTTCTTTGCTCCATCCCTTTGAAGAAGTTCGAAGTC 289
|| |||| |||| || |||| ||||||||||| ||||| |||||||| ||||||||||
Sbjct 233 TA--GAGATTTCTC-TTCTAAACCTTTCTTTGCTGCATCCTTTTGAAGAGGTTCGAAGTC 289
Query 290 TGAACTTATCTACTGAAGGATACAACGAATTCAATGGCTTCTTTGATGACGTAGAAGGTT 349
|| ||||||| | || | || || || || || || |||||||||| |||||||
Sbjct 290 TGGACTTATC-A---AAC--TCCA--GA-TTAAACGGATTGGTTGATGACGTGGAAGGTT 340
Query 350 ATAGAAGCTTAAGTAGATTAAGAAACTTGCAGAT-CATGGATCTCTCAACAAATTATTTC 408
||| |||| |||| |||||||||||| ||||||| | || || |||| ||||| | |||
Sbjct 341 ATAAAAGCCTAAGGAGATTAAGAAACCTGCAGATTC-TGAATTTCTCTTCAAATGAATTC 399
Query 409 AACAACACCATCTTTCCTTTTCTTAATGCCGCTACCTCACTTACAACTATTTTTCT-CA- 466
||||||| ||||||||| ||||||||||| ||||| |||||||||||| ||| ||| |
Sbjct 400 AACAACAGCATCTTTCCCTTTCTTAATGCTGCTACATCACTTACAACTCTTTCTCTTCGG 459
Query 467 CGTATAACGAA-ATGGATGGACCTTTTCCTATTAAAGGACT-AAAAGACTTGACAAACTT 524
|||| | | || ||| |||| ||| |||| |||||| ||| |||| |||||||||||||
Sbjct 460 CGTA-A-C-AATATGTATGGCCCTATTCCCCTTAAAGAACTTAAAA-ACTTGACAAACTT 515
Query 525 GGAACTGCTGGATTTGAGAGCAAACA-AATTAAAAGGCTCCATGCAAGAACTAAAAAA-T 582
||||||||||||| | || | ||||| |||| | || ||||||| | ||| | | |
Sbjct 516 GGAACTGCTGGATCTAAGTGGAAACAGAATTGAT-GGTTCCATGCCTG---TAAGAGAGT 571
Query 583 TTGATTAACTTG--GAAGTCTTGG--GTCTTGCTCAGAATC-ATGTGG-AC-GGACCT-A 634
|| ||| ||| |||| || | | ||| | ||| || | || | ||| | |
Sbjct 572 TTCCTTA-CTTAAAGAAG-CT-GAAAG-CTT--T-AGA-TCTAAGTTCTAATGGAATTTA 623
Query 635 TA-C-CAAT--A--G--AAGTATTCTGT-AATATTAAGAATCTGCGAG-AGCTCT-ATCT 683
|| | |||| | | |||| || ||| || || |||||| ||| || |||| | ||||
Sbjct 624 TAGCTCAATGGAATGGCAAGTGTTTTGTGAA-ATGAAGAATTTGC-AGGAGCT-TGATCT 680
Query 684 CAGAGGAAATCATTTTGTAGGCCAGCTTCCTCTTTGTTTAGGTCGCTTGAAGAAGCTACG 743
||||||| | |||||||||| ||||||||||||||||| ||| |||||| ||||||||
Sbjct 681 GAGAGGAATTAATTTTGTAGGTCAGCTTCCTCTTTGTTTTGGTAACTTGAACAAGCTACG 740
Query 744 GGTTCTTGATCTCTCATCCAACCAACTAAGTGGAATTCTACCATCTAGTTTCAATAGCCT 803
| ||||||| |||||||| |||||| ||| ||||| | ||||| | ||||||| ||||||
Sbjct 741 GTTTCTTGACCTCTCATCAAACCAATTAACTGGAAATATACCACCCAGTTTCAGTAGCCT 800
Query 804 TGAGTCTCTCGAATACCTATCATTG-CTAGAGAACAATTTTGCTGACTCATTCTCGCTCA 862
||||| |||||||| ||||||||| | ||| || | |||| | || ||||||||||
Sbjct 801 CGAGTCCCTCGAATATCTATCATTGTC-AGATAATAGCTTTGAAGGCTTTTTCTCGCTCA 859
Query 863 ATCCACTCACCAACCTTACAAAGCTCAAG 891
||||||| |||||||| ||||||||||||
Sbjct 860 ATCCACTTACCAACCTCACAAAGCTCAAG 888
Score = 477 bits (258), Expect = 2e-133
Identities = 494/605 (82%), Gaps = 27/605 (4%)
Strand=Plus/Plus
Query 899 TTGTACTAAGATTTTGCAGCTTGGTGGGAATCCCGT-CCTTTCTCGTGTACCAAAAGAAG 957
|||||||| || |||||||||||| | |||||| | ||||||| ||||||| |||||
Sbjct 971 TTGTACTACGACTTTGCAGCTTGGAGAAAATCCC-TAACTTTCTCATGTACCAGAAGAAC 1029
Query 958 TTGCGTCTAGTTGATCTTTC-GAGCAACA-AATTATCTGGAAAT-ATTCCTACCTGGCTG 1014
|||| | | |||||||| || | |||| | || ||||||| ||| |||||||| |||||
Sbjct 1030 TTGCATGTCGTTGATCTATCTG-GCAATAGAA-TATCTGG-AATCATTCCTACATGGCTT 1086
Query 1015 CT-GACGAATAATCCAGGACTTGAAGTCCTACAGTTGCAGAATAATTCATTTATCAACTT 1073
| || ||||||||||| ||||||||||||||||||| ||||||| ||||| | || | |
Sbjct 1087 TTGGA-GAATAATCCAGAACTTGAAGTCCTACAGTTGAAGAATAACTCATTCACCATC-T 1144
Query 1074 TTCA-ATGCCTACAAT-AGTGCATAATTTGCAGATCTTGGATTTCTCAGCAAATAATA-T 1130
|||| |||||||| || |||||||||||||||| | |||||||| |||| |||||||| |
Sbjct 1145 TTCAGATGCCTAC-ATCAGTGCATAATTTGCAGGTTTTGGATTTTTCAGAAAATAATATT 1203
Query 1131 CG-GGA-AGTTCCCTGATAA-GATGGATCATGCGCTACCGAATCTGGTACGTTTAAATGG 1187
| ||| |||||||||||| ||| || || ||| ||||||||||||| | | |||||
Sbjct 1204 GGTGGACTGTTCCCTGATAATTTTGG-TCGTGTGCTTCCGAATCTGGTACATATGAATGG 1262
Query 1188 CTCGAATAATGGGTTCCAAGGGTGTTTCCCAACGTCTATTGGTGAGATGAAGAATATATC 1247
||| |||||||||||||||||| ||||||| | || || ||||| ||| | ||||| ||
Sbjct 1263 CTCCAATAATGGGTTCCAAGGGAATTTCCCATCCTCCATGGGTGAAATGTATAATATTTC 1322
Query 1248 ATTCTTGGATCTATCTAATAATAACTTCTCTGGGAAGTTACCT-AGAAGCTTTGTCACAG 1306
|||| |||| || ||| |||| || || || ||| |||||||| | ||| |||||| ||
Sbjct 1323 ATTCCTGGACCTGTCTTATAACAATTTATCAGGGGAGTTACCTCA-AAGTTTTGTCTCAA 1381
Query 1307 GTTGTGTTTCACTAATG-TTCCTGAAGCTCTCTCACAACAAATTTAGCGGCCATTTTCTC 1365
||||| ||||| ||| | ||||| |||| |||||||||||||||||||||||||||||
Sbjct 1382 GTTGTTTTTCATTAA-GCATCCTGCAGCTGTCTCACAACAAATTTAGCGGCCATTTTCTT 1440
Query 1366 CCAAGAGAAACAAACTTCACTTCACTTGAG-GTGTTGAGAATGGATAACAACTTATTTAC 1424
|||||| ||||||||||||||||| |||| ||| ||||||| ||||||||||||||||
Sbjct 1441 CCAAGACAAACAAACTTCACTTCA-TTGATCGTGCTGAGAATCAATAACAACTTATTTAC 1499
Query 1425 GGGGAAGATCGGAGGTGGTTTGCGTAACTCCACA-ATGTTGCGGATTCTAGACATGTCCA 1483
||||||||||||| |||||||| || || || ||| | || || ||||||||||
Sbjct 1500 TGGGAAGATCGGAGTTGGTTTGCTTACCTTGGTTGAT-TTGTGTATACTTGACATGTCCA 1558
Query 1484 ACAAT 1488
|||||
Sbjct 1559 ACAAT 1563
> AT1G54470.2 | Symbols: RPP27 | RNI-like superfamily protein |
chr1:20344698-20349192 FORWARD LENGTH=3074
Length=3074
Score = 599 bits (324), Expect = 5e-170
Identities = 553/663 (83%), Gaps = 18/663 (3%)
Strand=Plus/Plus
Query 2079 TCAAGAAACTGAGATCAAATTTGCAGCGAAGCAAAGGTATGATTCTTATAGTGGAAG-AT 2137
|||||||| ||| ||||||||| || ||||| |||||||||||||||| ||| || |
Sbjct 2260 TCAAGAAATTGAAATCAAATTTTCAATGAAGCGAAGGTATGATTCTTATTTTGG-AGCAA 2318
Query 2138 CTGAGTTCAGCGAAGGA-ATTCTTCG-TCT-TATGTACGGGATGGATCTGTCAAACAATG 2194
|||| |||| | || || | ||| | | | |||||| || ||||| || |||| ||||
Sbjct 2319 CTGAATTCAAC-AATGACGTACTT-GAT-TATATGTATGGAATGGACCTATCAAGCAAT- 2374
Query 2195 GA-TTAAGTGGTGTTATCCCAACAGAGCTTGGAGGTCTCTTGAAA-CTAAGAACCTTGAA 2252
|| |||||||| ||||||||| ||||||||||| ||||| | ||| ||| || | ||||
Sbjct 2375 GAGTTAAGTGGGGTTATCCCAGCAGAGCTTGGAAGTCTC-TCAAAGCTACGAGTCATGAA 2433
Query 2253 TCTGTCTCACAATTTCTTGTCGAGTTCTATACCATTTAGCTTCTCCAAACTGAGGGATAT 2312
| | ||| ||| |||||||| ||||| ||||||| |||||||||||| || | ||||||
Sbjct 2434 TTTATCTTGCAACTTCTTGTCCAGTTCAATACCATCTAGCTTCTCCAATCTCAAGGATAT 2493
Query 2313 TGAGAGCCTTGATCTTTCTCATAACATGTTGCAAGGAAGCATTCCTCAACAACTTACCAG 2372
|||||||||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||
Sbjct 2494 TGAGAGCCTTGACCTTTCGCATAACATGTTACAAGGAAGTATTCCTCAACAACTAACCAA 2553
Query 2373 CCTTACTTCTCTTGCTGTGTTCGACGTGTCTTACAACAACTTATTAGGAATCATTCCCCA 2432
|||| ||||||||| ||| || || ||||||||||| || |||| ||||||||||||||
Sbjct 2554 CCTTTCTTCTCTTGTTGTCTTTGATGTGTCTTACAATAATTTATCCGGAATCATTCCCCA 2613
Query 2433 AGGAAGGCAATTTGACACCTTTGAAGAGGACAGCTACTTAGGTAATCCTCTGCTTTGTGG 2492
||||||||| ||| | |||||||| ||| | |||||||| || |||||||| ||||||||
Sbjct 2614 AGGAAGGCAGTTTAATACCTTTGACGAGAAAAGCTACTTGGGAAATCCTCTTCTTTGTGG 2673
Query 2493 ACCACCGACCAGTAGAAATTGTGA-GACTAAGAA-AAGTCCAGAGGAAGCAGATAATGGA 2550
||||||||||| ||||| |||||| | ||||||| | | |||| ||| |||| ||||||
Sbjct 2674 ACCACCGACCAATAGAAGTTGTGATG-CTAAGAAGACCT-CAGATGAATCAGAAAATGGA 2731
Query 2551 GGAGAAGAAGAAGATGATGAAGCTGCTATCGACATGGTGGTGTTCTATTTTAGTACTGCA 2610
|||||||||||||||||||||||| || | || ||| ||| ||||||||||||| |||
Sbjct 2732 GGAGAAGAAGAAGATGATGAAGCTCCTGTTGATATGTTGGCCTTCTATTTTAGTAGTGC- 2790
Query 2611 TTA-ACTTATGTGACCGCATTGATAGGTATTCTTGTACTTATGTGCTTTGATTGTTCTTG 2669
|| |||||||| || |||||||||| ||| || |||||||||||||||||||| |||
Sbjct 2791 TTCGACTTATGTAACTACATTGATAGGCATTTTTATACTTATGTGCTTTGATTGTCCTTT 2850
Query 2670 GCGTCGAGCATGGCTCCGCATTGTCGATGGTTCCATCGTCGCTGTGAAAAATATGTTGCC 2729
||||||||||||||||||||||||||||| |||||||| | | || |||| |||||||||
Sbjct 2851 GCGTCGAGCATGGCTCCGCATTGTCGATGCTTCCATCGCCTCAGTCAAAAGTATGTTGCC 2910
Query 2730 TTA 2732
|||
Sbjct 2911 TTA 2913
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135751747758
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5