BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481400 Length=2714 Score E Sequences producing significant alignments: (Bits) Value AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein ... 4135 0.0 > AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 | chr2:10847375-10850532 REVERSE LENGTH=2787 Length=2787 Score = 4135 bits (2239), Expect = 0.0 Identities = 2578/2739 (94%), Gaps = 34/2739 (1%) Strand=Plus/Plus Query 1 tttttttttGCCCTATCCATAGGGTTTTCTTCTCTCGTCTCGCTCTTTGATCTTCATGTG 60 |||||||||||||||||||||||||||||||| ||| ||| ||| | |||||||||||| Sbjct 55 TTTTTTTTTGCCCTATCCATAGGGTTTTCTTCGCTC-TCTATCTCCTCGATCTTCATGTG 113 Query 61 CATCTCTCTCTTTGCTATAATCGGAGCTAATTTGTTTGTTTTCTTCTTAATCGTCGTCAG 120 |||||||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||| | Sbjct 114 CATCTCTCTCTTTGGTATAATCGGAGCTAATTCGTTCGTTTTCTTCTTCATCTTCGTCGG 173 Query 121 ATCTTTCTTTTTTGCTCTTTCCCACTGGTTTTCGCTTGAGAAATCAAGCGTTTTCGTTTT 180 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 174 ATCTCTCTTTTTTGCTCTTTCCCACGGGTTTTCGCTTGAGAAATCAAGCGTTTTCGTTTT 233 Query 181 TCCTGGGAGTTTTGAGCTCAAATCATGTCTCAGATCTATAGTTTCGCTGGTGAAAATGAT 240 ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct 234 TCCTGGGAGTTTTGAGCTCAAATCATGTCTCAGATCTTTAGTTTTGCCGGTGAAAATGAT 293 Query 241 TTTTACCGTCGCGGCGCAATATACCCAAACCCGAAGGATGCTAGTCTTTTGTTGTCGCTT 300 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 294 TTTTACCGTCGTGGCGCAATATACCCAAACCCAAAGGATGCTAGTCTTTTGTTATCGCTT 353 Query 301 GGTAGTTTCG-TGGATGTCTATTTCCCTCCTAGTAAGAGATCGCGTGTCGTTGCACCTAC 359 |||||||||| | ||||| ||||||||||| || |||||||| ||||| ||||||||||| Sbjct 354 GGTAGTTTCGCT-GATGTTTATTTCCCTCCAAGCAAGAGATCACGTGTTGTTGCACCTAC 412 Query 360 GGTCTTCAGTGGTTTCGAGAAAAAGCCAGTTTCCATTGATGTGCTTCCAGATGAGTGCCT 419 | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 413 GATCTTCAGTGCTTTCGAGAAAAAGCCAGTTTCCATTGATGTGCTACCAGATGAGTGTCT 472 Query 420 TTTTGAGATCTTTAGGCGGTTGCCTGGACCGCAAGAGAGGAGTGCTTGCGCTTTTGTCTC 479 |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| Sbjct 473 TTTTGAGATCTTTAGGCGTTTGTCTGGACCACAAGAGAGGAGTGCTTGCGCTTTTGTCTC 532 Query 480 GAAACATTGGCTTACGCTTGTGAGTAGTATCCGGCAAACGGAGCTTGATGTTTCTTCCAA 539 ||||| |||||||||||||| ||||| ||||| |||| |||| |||||||| ||||||| Sbjct 533 CAAACAGTGGCTTACGCTTGTAAGTAGCATCCGTCAAAAGGAGATTGATGTTCCTTCCAA 592 Query 540 CAAAACTGAAGATGGTGATGATTGTGAAGGGTGTTTGTCTAGGAGCTTAGATGGCAAGAA 599 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 593 GATAACTGAAGATGGTGATGATTGTGAAGGGTGTTTGTCTAGGAGCTTAGATGGGAAGAA 652 Query 600 GGCAACAGATGTTAGACTAGCTGCAATTGCTGTTGGGACAGCTGGTCGTGGGGGACTTGG 659 |||||||||||||||| | || |||||||||||||| || |||||||||||||||||||| Sbjct 653 GGCAACAGATGTTAGATTGGCAGCAATTGCTGTTGGAACTGCTGGTCGTGGGGGACTTGG 712 Query 660 AAAACTGTCTATTCGGGGAAGCAGTTCTGGTAGCAAGGTTTCAGATCTTGGTCTTAGGTC 719 |||| |||| ||||| || |||| |||| || || |||||||||||||||||| |||| Sbjct 713 AAAATTGTCGATTCGAGGTAGCAACTCTGCTA--AA-GTTTCAGATCTTGGTCTTCGGTC 769 Query 720 AATTGGTCGGAGCTGCCCTTCT-TTGGCGTCTCTTTCTCTATGGAACCTTTCTACCATTA 778 |||||||| |||||||||||| | || ||||||||| || |||||| |||||||||||| Sbjct 770 TATTGGTCGTAGCTGCCCTTCTCTCGG-GTCTCTTTCACTGTGGAACGTTTCTACCATTA 828 Query 779 CTGACAATGGCCTCTTGGAGATTGCTGAGGGTTGTCCTCAACTTGAGAAGCTTGACCTGA 838 |||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 829 CTGACAATGGACTTTTGGAGATTGCTGAGGGTTGTGCTCAACTTGAGAAGCTTGAGCTGA 888 Query 839 ACCGATGCTCTACAATCACTGACAAGGGTTTGGTTGCTATTGCTAAGAGCTGCCCTAACT 898 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 889 ACCGCTGCTCTACAATCACTGACAAGGGTTTGGTAGCTATTGCTAAGAGCTGCCCCAACT 948 Query 899 TGAGTGAGCTGACATTGGAGGCTTGTTCAAGTATTGGAGATGAGGGTCTGCAAGCCATTG 958 ||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| Sbjct 949 TGACTGAGCTGACATTGGAGGCTTGTTCAAGAATTGGAGATGAGGGTTTGCTAGCCATTG 1008 Query 959 CACGATCCTGCTGCAAGCTGAAGTCAGTATCGATCAAGAACTGTCCTCTTGTCAGGGATC 1018 || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1009 CAAGATCCTGCTCCAAGCTGAAGTCAGTCTCGATCAAGAACTGTCCTCTTGTCAGGGATC 1068 Query 1019 AAGGAATCGCCTCTCTACTGTCTAACACCACATGTT-CTCTGGCAAAACTTAAGCTTCAG 1077 ||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||| Sbjct 1069 AAGGAATCGCCTCTCTACTGTCTAACACCACCTGTTCCT-TGGCAAAACTTAAGCTTCAG 1127 Query 1078 ATGCTGAATGTCACTGATGTGTCTCTGGCTGTTGTGGGTCATTACGGCTTGTCGATCACT 1137 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1128 ATGCTGAATGTCACTGATGTGTCTCTTGCTGTTGTGGGTCATTACGGCTTGTCGATCACT 1187 Query 1138 GATCTTGTACTCGCTGGATTATCACACGTGAGCGAGAAGGGATTCTGGGTCATGGGAAAT 1197 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1188 GATCTTGTGCTCGCTGGATTATCACACGTGAGCGAGAAGGGATTCTGGGTCATGGGAAAT 1247 Query 1198 GGTGTCGGGCTTCAAAAATTAAACTCTCTGACCATCACAGCCTGCCAGGGAGTGACTGAC 1257 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1248 GGTGTCGGGCTGCAAAAATTAAACTCTCTGACCATCACAGCCTGCCAAGGAGTGACTGAC 1307 Query 1258 ACGGGGCTTGAATCTGTTGGAAAGGGCTGCCCGAACATGAAAAAGGCGATCATCAGTAAA 1317 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1308 ATGGGGCTTGAATCTGTTGGAAAGGGCTGCCCGAACATGAAAAAGGCGATCATCAGTAAA 1367 Query 1318 TCCCCTTTGTTATCCGACAATGGGTTGGTCTCTTTTGCAAAAGCTTGTTTATCACTTGAG 1377 |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 1368 TCCCCTTTGTTATCTGACAACGGGTTGGTCTCTTTTGCAAAAGCTTCTTTATCACTTGAG 1427 Query 1378 AGTCTTCAGCTTGAAGAATGCCACAGAGTTACCCAATTTGGGTTTTTTGGTTCCCTTTTG 1437 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1428 AGTCTTCAGCTTGAAGAATGCCACAGGGTTACCCAATTTGGGTTTTTTGGTTCCCTTTTG 1487 Query 1438 AACTGTGGTGAAAAGTTGAAGGCTTTCTCTCTGGTGAACTGTTTGAGCATTAGAGATCTC 1497 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1488 AACTGTGGTGAAAAGTTGAAGGCTTTCTCTCTGGTGAACTGTTTGAGTATTAGAGATCTC 1547 Query 1498 ACCACAGGATTGCCTGCTTCATCTCATTGCAGCGCTCTGCGCTCTTTGTCTATTCGTAAC 1557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1548 ACCACAGGATTGCCTGCTTCATCTCATTGCAGCGCTCTGCGCTCTTTGTCTATTCGTAAC 1607 Query 1558 TGTCCTGGCTTTGGTGATGCAAATCTTGCAGCCATCGGGAAGTTGTGCCCTCAGCTCGAG 1617 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1608 TGCCCTGGCTTTGGTGATGCAAATCTTGCAGCCATCGGGAAGTTGTGCCCTCAGCTCGAG 1667 Query 1618 GATATTGATCTGTGTGGGCTCAAGGGGATAACAGAGTCTGGTTTCCTACATCTAATTCAG 1677 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1668 GATATTGATCTGTGTGGGCTCAAGGGGATAACAGAGTCTGGTTTCCTACATCTGATTCAG 1727 Query 1678 AGCTCTCTTGTGAAGGTCAACTTCAGTGGTTGTTCCAACTTGACCGACAGAGTGATCTCT 1737 ||||||||||||||| |||||||||||||||||||||| ||||| || |||||||||||| Sbjct 1728 AGCTCTCTTGTGAAGATCAACTTCAGTGGTTGTTCCAATTTGACTGATAGAGTGATCTCT 1787 Query 1738 GCCATCACTGCTCGTAACGGGTGGACTCTCGAAGTCTTAAACATCGATGGATGTTCCAAT 1797 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1788 GCCATCACTGCTCGTAACGGGTGGACTCTTGAAGTCTTAAACATCGATGGATGTTCCAAT 1847 Query 1798 ATCACTGACGCCAGCCTGGTCTCCATTGCAGCAAACTGCCAGATTCTCAGTGATTTGGAT 1857 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1848 ATCACTGACGCCAGCCTGGTCTCCATTGCAGCAAACTGCCAGATTCTCAGTGATTTGGAT 1907 Query 1858 CTTTCGAAATGCGCAATCTCAGATTCAGGGGTTCATGCATTGGCTTCCTCTGATAAGCTC 1917 ||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| Sbjct 1908 ATTTCGAAATGCGCAATCTCAGATTCAGGGATTCAAGCATTGGCCTCCTCTGATAAGCTC 1967 Query 1918 AAACTGCAGATCCTTTCAGTTGCAGGTTGCTCTATGGTGACAGACAAGAGCATGCCAGCC 1977 |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 1968 AAACTGCAGATCCTATCAGTTGCAGGTTGCTCTATGGTTACAGACAAGAGCTTGCCAGCC 2027 Query 1978 ATCGTCGGGTTGGGTTCCACTTTATTGGGATTAAACCTCCAACAGTGTCGATCCATCTCC 2037 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 2028 ATCGTCGGGTTGGGTTCCACTCTATTGGGATTAAACCTCCAACAGTGTCGATCCATTTCC 2087 Query 2038 AATTCCACTGTCGACTTCTTAGTCGAGCGCCTTTACAAATGTGACATCCTCTCCTGATCA 2097 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2088 AATTCCACTGTCGACTTCTTAGTCGAGCGTCTTTACAAATGTGACATCCTCTCCTGATCA 2147 Query 2098 TCAATTCCACTATCGACCTCTCCACCTATAATGTAAGGTATTTTAGTCCGTCCATGTCCG 2157 |||||||||| ||||||||||||| |||||||||||||||||||||||||||| || || Sbjct 2148 ACAATTCCACTGTCGACCTCTCCACTTATAATGTAAGGTATTTTAGTCCGTCCAAGTTCG 2207 Query 2158 TTTATCAAGTGTCAACTGTTTTTCAGGCTCTGTGATCTACGTGTCCCTC-C-C--Gg-t- 2211 |||||||||| |||||| ||||||||||||||||||||||| ||||||| | | || | Sbjct 2208 TTTATCAAGTCTCAACTCTTTTTCAGGCTCTGTGATCTACGCGTCCCTCTCGCTAGGCTC 2267 Query 2212 --t------tt--ccttcttttttccaagcagttcgcttccggtttctttttttccagtc 2261 | || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2268 GGTACCCGGTTTTCCTTCTTTTTTCCAAGCAGTTCGCTTCCGGTTTCTTTTTTTCCAGTC 2327 Query 2262 aatggtttttttgcggggtttcctttttATCAAGGGAAACTCTAGCTTATCTCGAAATCG 2321 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 2328 AATGGTTTTTTTGCAGGGTTTCCTTTTTATCAAGG-AAACTCTAACTTATCTCGAAATCG 2386 Query 2322 GAAGGTTGTGCGTTGCTTGAGAATATATTTACCGGGTATCCGAGATTTTAGGGTTTATCA 2381 |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2387 GAAGGTTGTGTGTTGCTTGAGAATATATTTACCGGGTAGACGAGATTTTAGGGTTTATCA 2446 Query 2382 TCTCCTGTTTCTTGCT--TT-GGTGTCTTTTACGAGCCAGTTATCTATTTTATGCGCGTC 2438 |||||||||||||||| || |||||||||||||||||||||||||||||||| | |||| Sbjct 2447 TCTCCTGTTTCTTGCTGCTTTGGTGTCTTTTACGAGCCAGTTATCTATTTTATCCCCGTC 2506 Query 2439 GTTTGTCTTTGTTTGGTTTGGTTTTCCTCGGAAGGGTCTTGTATGATTTGTACGGGTTTA 2498 ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| | Sbjct 2507 GTTTGTCTTTGTTGGGTTTGGTTTTCCTCGGAAGGGTTTTGTATGATATGTACGGGTTCA 2566 Query 2499 GGTTTTGTTCAGGCCTTGGTTCTCTCAGAGGTTTGCTCTGGCTTTTGTTGCAACAACTCT 2558 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2567 GGTTTGGTTCAGGCCTTGGTTCTCTCAGAGGTTTGCTCTGGCTTTTGTTGCAACAACTCT 2626 Query 2559 ATTAAAGAGttttttgtg--ttattttttt-gccagagccctcgtttttttttCCAGGCA 2615 ||||||||||||||| || || ||||||| ||||||||||||||||||||| ||||||| Sbjct 2627 ATTAAAGAGTTTTTTTTGGGTTTTTTTTTTTGCCAGAGCCCTCGTTTTTTTT-CCAGGCA 2685 Query 2616 CTGTATTACAATCTGTATAAACACTGTACTAAATTATGTAATGCCCTTTGGGATGGTTTA 2675 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2686 CTGTATTACAATCTGTATGAACACTGTACTAAATTATGTAATGCCCTTTGGGATGGTTTA 2745 Query 2676 ATGAGTATTGAATAAAATTCTCATTTCGTTGTATAATAC 2714 ||||||||||||||||||||||||||||||||||| ||| Sbjct 2746 ATGAGTATTGAATAAAATTCTCATTTCGTTGTATATTAC 2784 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 134798575841 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5